Strain Fitness in Shewanella amazonensis SB2B around Sama_1528

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,857,300	-		Sama_1527	0.28	-0.8
1,857,300	-		Sama_1527	0.28	-0.1
1,857,446	-		Sama_1527	0.42	+0.5
1,857,474	-		Sama_1527	0.45	+1.5
1,857,607	-		Sama_1527	0.57	-0.1
1,857,638	-		Sama_1527	0.60	+0.2
1,857,722	-		Sama_1527	0.68	+0.5
1,857,748	-		Sama_1527	0.70	+0.1
1,857,839	+		Sama_1527	0.79	+0.5
1,857,839	+		Sama_1527	0.79	-0.8
1,858,057	+				+1.5
1,858,069	-				-2.1
1,858,131	-				+2.1
1,858,131	-				-1.2
1,858,154	-				+0.3
1,858,207	-				-0.1
1,858,207	-				-0.5
1,858,207	-				+0.5
1,858,207	-				-1.1
1,858,207	-				-0.5
1,858,329	-		Sama_1528	0.26	-0.2
1,858,331	-		Sama_1528	0.26	-1.9
1,858,331	-		Sama_1528	0.26	-1.5
1,858,347	-		Sama_1528	0.29	+0.5
1,858,404	-		Sama_1528	0.37	-0.1
1,858,404	-		Sama_1528	0.37	-1.5
1,858,683	-		Sama_1528	0.79	-0.3
1,858,695	-		Sama_1528	0.80	-0.5
1,858,771	-				-1.8
1,858,771	-				-1.3
1,858,777	-				+0.5
1,858,791	-				+1.3
1,858,839	-				-0.6
1,858,840	+				+2.1
1,858,884	+				+0.5
1,858,885	-				-1.2
1,858,885	-				-0.4
1,858,972	+				-1.8
1,858,972	+				-0.3
1,858,973	-				+0.0
1,858,973	-				-0.8
1,858,973	-				+1.1
1,859,002	+				+0.5
1,859,003	-				+0.2
1,859,003	-				+0.5
1,859,017	+				-2.4
1,859,018	-				+0.7
1,859,018	-				+0.5
1,859,027	-				-0.6
1,859,161	+		Sama_1529	0.14	-0.8
1,859,180	+		Sama_1529	0.16	-0.1
1,859,180	+		Sama_1529	0.16	-1.2
1,859,181	-		Sama_1529	0.16	+0.9
1,859,181	-		Sama_1529	0.16	-0.5
1,859,181	-		Sama_1529	0.16	-1.1
1,859,285	+		Sama_1529	0.22	-1.1
1,859,286	-		Sama_1529	0.22	-0.8
1,859,286	-		Sama_1529	0.22	-0.5
1,859,423	+		Sama_1529	0.31	-0.1
1,859,440	+		Sama_1529	0.32	+1.8
1,859,441	-		Sama_1529	0.32	+0.8
1,859,468	+		Sama_1529	0.34	+0.8
1,859,510	+		Sama_1529	0.37	+0.3
1,859,511	-		Sama_1529	0.37	-1.1
1,859,511	-		Sama_1529	0.37	-1.8
1,859,519	+		Sama_1529	0.37	-1.2
1,859,532	+		Sama_1529	0.38	+0.3
1,859,532	+		Sama_1529	0.38	+0.5
1,859,532	+		Sama_1529	0.38	+1.0
1,859,533	-		Sama_1529	0.38	-1.5
1,859,533	-		Sama_1529	0.38	-0.2
1,859,533	-		Sama_1529	0.38	-0.8
1,859,533	-		Sama_1529	0.38	-1.1
1,859,533	-		Sama_1529	0.38	-1.5
1,859,581	+		Sama_1529	0.41	-0.2
1,859,700	+		Sama_1529	0.49	-1.7
1,859,700	+		Sama_1529	0.49	-0.2
1,859,701	-		Sama_1529	0.49	+0.1
1,859,701	-		Sama_1529	0.49	-1.8
1,859,759	-		Sama_1529	0.53	+0.8
1,859,759	-		Sama_1529	0.53	-0.5