Strain Fitness in Shewanella amazonensis SB2B around Sama_1526

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,855,276	+		Sama_1524	0.89	-1.7
1,855,301	-				+0.1
1,855,310	-				-1.0
1,855,310	-				-0.2
1,855,360	+				-0.2
1,855,360	+				-0.8
1,855,364	+				-2.2
1,855,364	+				+0.8
1,855,364	+				+0.7
1,855,364	+				-0.1
1,855,364	+				+0.6
1,855,365	-				-0.7
1,855,365	-				+0.0
1,855,365	-				-1.3
1,855,365	-				+0.1
1,855,463	-				+0.5
1,855,475	+				-0.3
1,855,556	+		Sama_1525	0.11	-1.7
1,855,556	+		Sama_1525	0.11	-1.5
1,855,556	+		Sama_1525	0.11	-1.1
1,855,670	+		Sama_1525	0.28	+0.7
1,855,758	+		Sama_1525	0.41	-0.5
1,855,776	+		Sama_1525	0.44	-1.8
1,855,776	+		Sama_1525	0.44	+0.1
1,855,776	+		Sama_1525	0.44	-0.9
1,855,777	-		Sama_1525	0.44	-0.8
1,855,942	-		Sama_1525	0.68	-0.1
1,855,942	-		Sama_1525	0.68	+1.5
1,855,976	+		Sama_1525	0.73	-0.1
1,855,976	+		Sama_1525	0.73	-0.6
1,856,029	+		Sama_1525	0.80	-0.1
1,856,162	-				+0.7
1,856,167	+				+0.7
1,856,168	-				+1.1
1,856,212	-				-0.1
1,856,248	-				+0.1
1,856,481	+		Sama_1526	0.39	-1.1
1,856,481	+		Sama_1526	0.39	+0.4
1,856,481	+		Sama_1526	0.39	-1.1
1,856,481	+		Sama_1526	0.39	-2.1
1,856,482	-		Sama_1526	0.40	-0.8
1,856,482	-		Sama_1526	0.40	+1.1
1,856,487	+		Sama_1526	0.40	-0.1
1,856,487	+		Sama_1526	0.40	-0.9
1,856,487	+		Sama_1526	0.40	-0.7
1,856,487	+		Sama_1526	0.40	-0.1
1,856,487	+		Sama_1526	0.40	-1.5
1,856,488	-		Sama_1526	0.41	-0.8
1,856,488	-		Sama_1526	0.41	-0.1
1,856,491	+		Sama_1526	0.41	+0.7
1,856,491	+		Sama_1526	0.41	+0.3
1,856,492	-		Sama_1526	0.41	-1.1
1,856,492	-		Sama_1526	0.41	-0.8
1,856,492	-		Sama_1526	0.41	-1.3
1,856,492	-		Sama_1526	0.41	-0.7
1,856,492	-		Sama_1526	0.41	-2.9
1,856,669	-		Sama_1526	0.71	+0.0
1,856,677	+		Sama_1526	0.73	-0.7
1,856,677	+		Sama_1526	0.73	-1.9
1,856,678	-		Sama_1526	0.73	+0.1
1,856,678	-		Sama_1526	0.73	+1.5
1,856,711	+		Sama_1526	0.78	-0.1
1,856,801	-				-2.1
1,856,801	-				+0.5
1,856,876	-				-1.3
1,856,897	+				+0.2
1,856,897	+				+0.2
1,856,897	+				+0.2
1,856,898	-				-1.5
1,856,898	-				-0.1
1,856,898	-				+1.3
1,856,898	-				+0.5
1,856,898	-				+0.8
1,856,912	-				+0.9
1,856,928	+				+2.5
1,856,928	+				-0.5
1,856,945	+				+1.5
1,856,946	-				+0.1
1,856,953	+				-0.8
1,856,999	-				-1.3
1,857,002	-				+0.4
1,857,014	-				-0.5
1,857,300	-		Sama_1527	0.28	-0.8
1,857,300	-		Sama_1527	0.28	-0.1
1,857,446	-		Sama_1527	0.42	+0.5
1,857,474	-		Sama_1527	0.45	+1.5
1,857,607	-		Sama_1527	0.57	-0.1
1,857,638	-		Sama_1527	0.60	+0.2
1,857,722	-		Sama_1527	0.68	+0.5
1,857,748	-		Sama_1527	0.70	+0.1