Strain Fitness in Shewanella amazonensis SB2B around Sama_3448

Experiment: sodium fluoride 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium fluoride 25 mM
4,077,649	-		Sama_3446	0.68	-0.5
4,077,718	+		Sama_3446	0.88	-0.3
4,077,719	-		Sama_3446	0.88	-0.3
4,077,719	-		Sama_3446	0.88	-0.6
4,077,729	+				-1.5
4,077,729	+				+0.2
4,077,730	-				+1.3
4,077,730	-				-1.3
4,077,730	-				+1.3
4,077,730	-				-0.6
4,077,730	-				+1.2
4,077,745	+				-0.1
4,077,745	+				+0.3
4,077,745	+				-0.1
4,077,753	+				+0.4
4,077,753	+				+1.1
4,077,753	+				+1.1
4,077,753	+				-0.2
4,077,753	+				-0.5
4,077,753	+				-0.1
4,077,754	-				-1.2
4,077,754	-				-0.7
4,077,754	-				-0.7
4,077,754	-				+1.1
4,077,754	-				+0.4
4,077,754	-				-1.3
4,077,754	-				+0.8
4,077,754	-				+0.3
4,077,754	-				-2.0
4,077,754	-				-0.1
4,077,754	-				-0.3
4,077,754	-				-0.5
4,077,754	-				+0.8
4,077,754	-				-0.5
4,077,754	-				-1.4
4,077,754	-				+0.3
4,077,754	-				-0.9
4,077,754	-				-0.4
4,077,755	+				+0.9
4,077,755	+				-0.3
4,077,755	+				-0.4
4,077,755	+				-0.5
4,077,755	+				-1.2
4,077,755	+				-2.6
4,077,755	+				+0.2
4,077,755	+				-1.3
4,077,755	+				-0.2
4,077,755	+				-0.6
4,077,755	+				+0.9
4,077,755	+				-1.1
4,077,755	+				+0.1
4,077,755	+				+0.2
4,077,755	+				-0.7
4,077,755	+				+0.7
4,077,755	+				+0.8
4,077,755	+				+0.5
4,077,755	+				-0.5
4,077,755	+				-1.9
4,077,755	+				+0.1
4,077,755	+				+1.5
4,077,755	+				-0.7
4,077,756	-				+0.2
4,077,756	-				+0.9
4,077,756	-				-0.8
4,077,756	-				+0.6
4,077,756	-				+2.1
4,077,756	-				-1.6
4,077,756	-				-0.4
4,077,756	-				+0.7
4,077,756	-				+0.4
4,077,756	-				+0.7
4,077,756	-				+0.4
4,077,756	-				-0.2
4,077,756	-				-0.6
4,077,756	-				-0.4
4,077,756	-				+0.1
4,077,756	-				-0.7
4,077,756	-				-0.3
4,077,756	-				+0.4
4,077,756	-				+1.1
4,077,756	-				+0.0
4,077,756	-				-0.8
4,077,756	-				-0.2
4,077,756	-				+0.0
4,077,756	-				+0.5
4,077,756	-				-0.1
4,077,756	-				-0.6
4,077,756	-				+0.1
4,077,756	-				+1.2
4,077,756	-				-0.2
4,077,756	-				-0.1
4,077,785	+				+1.6
4,077,785	+				-0.8
4,077,785	+				+0.1
4,077,786	-				+0.4
4,077,786	-				+0.6
4,077,786	-				-0.1
4,077,786	-				-0.8
4,077,786	-				-1.2
4,077,786	-				+0.0
4,077,816	+				+0.4
4,077,890	-				-0.9
4,077,896	+				+1.1
4,077,896	+				+1.3
4,077,896	+				-0.1
4,077,896	+				-0.4
4,077,897	-				-1.3
4,077,933	+		Sama_3447	0.12	-1.9
4,077,933	+		Sama_3447	0.12	-0.5
4,077,933	+		Sama_3447	0.12	+0.8
4,077,933	+		Sama_3447	0.12	-0.5
4,077,934	-		Sama_3447	0.13	-0.5
4,078,057	+		Sama_3447	0.32	-1.5
4,078,086	+		Sama_3447	0.37	-0.7
4,078,087	-		Sama_3447	0.37	-0.1
4,078,087	-		Sama_3447	0.37	-0.4
4,078,096	-		Sama_3447	0.38	+0.5
4,078,140	-		Sama_3447	0.45	-1.1
4,078,209	+		Sama_3447	0.56	-1.0
4,078,209	+		Sama_3447	0.56	+0.1
4,078,209	+		Sama_3447	0.56	+0.3
4,078,209	+		Sama_3447	0.56	-0.1
4,078,210	-		Sama_3447	0.56	-0.3
4,078,210	-		Sama_3447	0.56	+0.4
4,078,210	-		Sama_3447	0.56	-0.9
4,078,210	-		Sama_3447	0.56	-0.3
4,078,210	-		Sama_3447	0.56	-0.5
4,078,210	-		Sama_3447	0.56	-0.5
4,078,210	-		Sama_3447	0.56	+0.7
4,078,232	-		Sama_3447	0.60	-0.6
4,078,331	+		Sama_3447	0.76	-0.2
4,078,331	+		Sama_3447	0.76	-0.4
4,078,332	-		Sama_3447	0.76	+0.5
4,078,332	-		Sama_3447	0.76	+0.2
4,078,332	-		Sama_3447	0.76	+0.0
4,078,423	-				+0.1
4,078,445	+				+0.1
4,078,464	+				+0.2
4,078,464	+				+0.3
4,078,464	+				-0.6
4,078,464	+				+0.5
4,078,464	+				+1.8
4,078,464	+				-0.3
4,078,464	+				-1.8
4,078,465	-				+0.3
4,078,488	+				-0.6
4,078,488	+				+1.1
4,078,489	-				+0.9
4,078,498	+				-0.4
4,078,498	+				+0.1
4,078,498	+				+0.7
4,078,499	-				-0.9
4,078,499	-				+0.4
4,078,499	-				-0.7
4,078,499	-				-1.9
4,078,499	-				-1.1
4,078,499	-				+0.6
4,078,499	-				-1.3
4,078,516	+				+0.3
4,078,517	-				+0.4
4,078,519	+				-1.6
4,078,519	+				-0.1
4,078,520	-				+0.3
4,078,520	-				+1.4
4,078,520	-				+0.3
4,078,555	+				+1.4
4,078,555	+				+0.5
4,078,556	-				+1.1
4,078,565	+				+0.4
4,078,565	+				-1.5
4,078,565	+				-0.9
4,078,565	+				-1.5
4,078,566	-				-0.7
4,078,566	-				-1.2
4,078,566	-				-0.6
4,078,566	-				-0.8
4,078,584	-				-0.4
4,078,584	-				-1.0
4,078,663	+				+1.4
4,078,664	-				+1.1
4,078,664	-				+0.5
4,078,675	+				+1.3
4,078,675	+				+1.1
4,078,675	+				+0.2
4,078,675	+				+0.2
4,078,675	+				+0.3
4,078,675	+				+0.1
4,078,676	-				-1.0
4,078,676	-				+0.0
4,078,676	-				+0.2
4,078,676	-				+0.5
4,078,676	-				-0.2
4,078,739	+		Sama_3448	0.14	+0.3
4,078,797	-		Sama_3448	0.18	+0.9
4,078,797	-		Sama_3448	0.18	-1.0
4,078,797	-		Sama_3448	0.18	+0.4
4,078,847	+		Sama_3448	0.23	+0.2
4,078,847	+		Sama_3448	0.23	-0.6
4,078,847	+		Sama_3448	0.23	+0.5
4,078,847	+		Sama_3448	0.23	+1.3
4,078,847	+		Sama_3448	0.23	-1.8
4,078,847	+		Sama_3448	0.23	+1.3
4,078,848	-		Sama_3448	0.23	+0.1
4,078,848	-		Sama_3448	0.23	+0.1
4,078,848	-		Sama_3448	0.23	-0.8
4,078,856	+		Sama_3448	0.23	+0.2
4,078,856	+		Sama_3448	0.23	+0.1
4,078,856	+		Sama_3448	0.23	+1.2
4,078,856	+		Sama_3448	0.23	+0.7
4,078,857	-		Sama_3448	0.23	-2.5
4,078,857	-		Sama_3448	0.23	-0.5
4,078,857	-		Sama_3448	0.23	+1.7
4,078,857	-		Sama_3448	0.23	-0.8
4,078,857	-		Sama_3448	0.23	+0.8
4,078,857	-		Sama_3448	0.23	-1.0
4,078,857	-		Sama_3448	0.23	+0.5
4,078,857	-		Sama_3448	0.23	+0.9
4,078,857	-		Sama_3448	0.23	+1.2
4,078,857	-		Sama_3448	0.23	+0.3
4,078,906	-		Sama_3448	0.28	-1.0
4,078,906	-		Sama_3448	0.28	-0.8
4,078,935	+		Sama_3448	0.30	+1.6
4,078,935	+		Sama_3448	0.30	-0.2
4,078,935	+		Sama_3448	0.30	+0.3
4,078,936	-		Sama_3448	0.30	+0.5
4,078,936	-		Sama_3448	0.30	+0.4
4,078,936	-		Sama_3448	0.30	+0.2
4,078,936	-		Sama_3448	0.30	+0.2
4,078,936	-		Sama_3448	0.30	+1.2
4,078,936	-		Sama_3448	0.30	+0.4
4,078,976	+		Sama_3448	0.33	-0.2
4,079,105	-		Sama_3448	0.44	+0.2
4,079,147	-		Sama_3448	0.48	-0.7
4,079,147	-		Sama_3448	0.48	+0.4
4,079,147	-		Sama_3448	0.48	+0.4
4,079,182	+		Sama_3448	0.50	+1.5
4,079,182	+		Sama_3448	0.50	+0.9
4,079,183	-		Sama_3448	0.51	+0.7
4,079,183	-		Sama_3448	0.51	-0.8
4,079,197	+		Sama_3448	0.52	+1.5
4,079,220	-		Sama_3448	0.54	+1.0
4,079,220	-		Sama_3448	0.54	-0.1
4,079,278	+		Sama_3448	0.58	+0.0
4,079,278	+		Sama_3448	0.58	+0.1
4,079,329	-		Sama_3448	0.63	+0.1
4,079,329	-		Sama_3448	0.63	-0.5
4,079,329	-		Sama_3448	0.63	-0.1
4,079,342	+		Sama_3448	0.64	+0.3
4,079,342	+		Sama_3448	0.64	-0.7
4,079,342	+		Sama_3448	0.64	-0.4
4,079,343	-		Sama_3448	0.64	+0.2
4,079,343	-		Sama_3448	0.64	+0.8
4,079,383	+		Sama_3448	0.67	+0.6
4,079,383	+		Sama_3448	0.67	+0.9
4,079,383	+		Sama_3448	0.67	-1.1
4,079,384	-		Sama_3448	0.67	+0.7
4,079,384	-		Sama_3448	0.67	-1.4
4,079,389	+		Sama_3448	0.68	+1.2
4,079,389	+		Sama_3448	0.68	+0.0
4,079,389	+		Sama_3448	0.68	+0.8
4,079,390	-		Sama_3448	0.68	-0.3
4,079,390	-		Sama_3448	0.68	+0.2
4,079,390	-		Sama_3448	0.68	+0.5
4,079,390	-		Sama_3448	0.68	+0.1
4,079,390	-		Sama_3448	0.68	+0.5
4,079,390	-		Sama_3448	0.68	+0.3
4,079,416	+		Sama_3448	0.70	+0.7
4,079,416	+		Sama_3448	0.70	+1.3
4,079,416	+		Sama_3448	0.70	+0.1
4,079,417	-		Sama_3448	0.70	-0.3
4,079,417	-		Sama_3448	0.70	+0.9
4,079,417	-		Sama_3448	0.70	+0.8
4,079,417	-		Sama_3448	0.70	+0.9
4,079,417	-		Sama_3448	0.70	-1.5
4,079,417	-		Sama_3448	0.70	+0.5
4,079,476	-		Sama_3448	0.75	-0.7
4,079,542	+		Sama_3448	0.80	-0.7
4,079,542	+		Sama_3448	0.80	+0.5
4,079,542	+		Sama_3448	0.80	-0.1
4,079,542	+		Sama_3448	0.80	+1.0
4,079,542	+		Sama_3448	0.80	+1.2
4,079,542	+		Sama_3448	0.80	+0.9
4,079,542	+		Sama_3448	0.80	+1.0
4,079,542	+		Sama_3448	0.80	-0.3
4,079,543	-		Sama_3448	0.80	+1.8
4,079,543	-		Sama_3448	0.80	+0.2
4,079,543	-		Sama_3448	0.80	-0.1
4,079,543	-		Sama_3448	0.80	+1.1
4,079,543	-		Sama_3448	0.80	+0.5
4,079,543	-		Sama_3448	0.80	-0.4
4,079,543	-		Sama_3448	0.80	+1.2
4,079,543	-		Sama_3448	0.80	+0.1
4,079,543	-		Sama_3448	0.80	-0.2
4,079,582	-		Sama_3448	0.84	-0.5
4,079,601	+		Sama_3448	0.85	-2.1
4,079,601	+		Sama_3448	0.85	-0.9
4,079,602	-		Sama_3448	0.85	+0.7
4,079,602	-		Sama_3448	0.85	-0.3
4,079,602	-		Sama_3448	0.85	-0.7
4,079,602	-		Sama_3448	0.85	-0.2
4,079,607	+		Sama_3448	0.86	+0.9
4,079,607	+		Sama_3448	0.86	-1.0
4,079,607	+		Sama_3448	0.86	+0.8
4,079,608	-		Sama_3448	0.86	+1.3
4,079,608	-		Sama_3448	0.86	-1.3
4,079,710	+				-0.6
4,079,710	+				+0.9
4,079,710	+				+1.4
4,079,710	+				+0.8
4,079,710	+				+0.8
4,079,710	+				+0.8
4,079,710	+				+1.2
4,079,710	+				+2.7
4,079,710	+				-0.5
4,079,710	+				+0.2
4,079,710	+				+0.2
4,079,710	+				-0.2
4,079,711	-				-1.0
4,079,711	-				+0.0
4,079,711	-				+0.5
4,079,711	-				+0.2
4,079,711	-				+0.2
4,079,711	-				+0.3
4,079,711	-				+1.2
4,079,711	-				-0.9
4,079,711	-				+0.5
4,079,711	-				+1.9
4,079,711	-				+0.6
4,079,711	-				+1.3
4,079,733	+				-0.0
4,079,734	-				+0.2
4,079,734	-				-0.2
4,079,734	-				-0.2
4,079,757	-				+1.1
4,079,757	-				+0.0
4,079,807	+				+0.6
4,079,809	+				+1.0
4,079,810	-				-0.7
4,079,810	-				+0.4
4,079,810	-				+0.3
4,079,820	+				-0.6
4,079,820	+				-0.1
4,079,820	+				+0.2
4,079,821	-				+0.9
4,079,834	+				-0.1
4,079,834	+				+0.0
4,079,835	-				-0.6
4,079,835	-				+0.6
4,079,851	+				+1.7
4,079,933	+				-0.1
4,079,934	-				+0.3
4,079,942	+				+0.8
4,079,942	+				+0.3
4,079,942	+				+0.1
4,079,942	+				+0.4
4,079,943	-				+0.1
4,080,123	-		Sama_3449	0.24	-0.8
4,080,203	+		Sama_3449	0.32	+0.4
4,080,203	+		Sama_3449	0.32	+0.3
4,080,203	+		Sama_3449	0.32	+0.0
4,080,203	+		Sama_3449	0.32	+0.9
4,080,203	+		Sama_3449	0.32	+0.6
4,080,203	+		Sama_3449	0.32	+1.1
4,080,203	+		Sama_3449	0.32	+0.8
4,080,204	-		Sama_3449	0.32	+0.1
4,080,204	-		Sama_3449	0.32	+0.4
4,080,204	-		Sama_3449	0.32	+1.4
4,080,204	-		Sama_3449	0.32	-0.1
4,080,204	-		Sama_3449	0.32	-0.8
4,080,204	-		Sama_3449	0.32	+0.5
4,080,204	-		Sama_3449	0.32	+0.1
4,080,215	-		Sama_3449	0.33	-0.6
4,080,215	-		Sama_3449	0.33	-0.5
4,080,283	+		Sama_3449	0.40	+0.7
4,080,284	-		Sama_3449	0.40	+0.1
4,080,341	+		Sama_3449	0.46	-0.3
4,080,378	+		Sama_3449	0.50	+1.5
4,080,379	-		Sama_3449	0.50	+1.2
4,080,418	+		Sama_3449	0.54	+0.1
4,080,418	+		Sama_3449	0.54	-2.8
4,080,418	+		Sama_3449	0.54	-0.3
4,080,418	+		Sama_3449	0.54	+2.7
4,080,418	+		Sama_3449	0.54	-0.1
4,080,444	-		Sama_3449	0.57	+0.2
4,080,444	-		Sama_3449	0.57	+0.1
4,080,444	-		Sama_3449	0.57	+0.4
4,080,444	-		Sama_3449	0.57	-0.1
4,080,464	+		Sama_3449	0.59	-0.5
4,080,464	+		Sama_3449	0.59	-0.3
4,080,503	-		Sama_3449	0.63	+0.4
4,080,527	+		Sama_3449	0.65	+0.9
4,080,527	+		Sama_3449	0.65	+1.0
4,080,527	+		Sama_3449	0.65	-0.0
4,080,527	+		Sama_3449	0.65	+0.3
4,080,527	+		Sama_3449	0.65	-0.4
4,080,528	-		Sama_3449	0.65	-0.5
4,080,528	-		Sama_3449	0.65	+1.8
4,080,528	-		Sama_3449	0.65	-0.2
4,080,528	-		Sama_3449	0.65	-1.1
4,080,528	-		Sama_3449	0.65	-0.7
4,080,528	-		Sama_3449	0.65	+0.2
4,080,528	-		Sama_3449	0.65	+0.8
4,080,528	-		Sama_3449	0.65	+0.1
4,080,540	+		Sama_3449	0.67	+1.7
4,080,563	-		Sama_3449	0.69	-1.7
4,080,565	+		Sama_3449	0.69	-0.3
4,080,565	+		Sama_3449	0.69	+0.7
4,080,565	+		Sama_3449	0.69	+1.1
4,080,565	+		Sama_3449	0.69	-0.2
4,080,565	+		Sama_3449	0.69	+0.4
4,080,565	+		Sama_3449	0.69	+0.6
4,080,566	-		Sama_3449	0.69	+0.7
4,080,566	-		Sama_3449	0.69	+1.0
4,080,566	-		Sama_3449	0.69	+4.7
4,080,566	-		Sama_3449	0.69	-0.0
4,080,596	+		Sama_3449	0.72	+0.5
4,080,596	+		Sama_3449	0.72	+0.5
4,080,596	+		Sama_3449	0.72	-0.0
4,080,596	+		Sama_3449	0.72	-0.5
4,080,596	+		Sama_3449	0.72	+0.1
4,080,596	+		Sama_3449	0.72	-0.0
4,080,596	+		Sama_3449	0.72	+0.9
4,080,596	+		Sama_3449	0.72	+0.4
4,080,597	-		Sama_3449	0.72	+0.5
4,080,597	-		Sama_3449	0.72	-0.1
4,080,597	-		Sama_3449	0.72	-0.1
4,080,597	-		Sama_3449	0.72	-0.7
4,080,597	-		Sama_3449	0.72	+1.1
4,080,597	-		Sama_3449	0.72	+0.4
4,080,597	-		Sama_3449	0.72	+0.7
4,080,597	-		Sama_3449	0.72	-1.3
4,080,700	+		Sama_3449	0.83	-0.3
4,080,700	+		Sama_3449	0.83	-1.7
4,080,701	-		Sama_3449	0.83	+0.8
4,080,701	-		Sama_3449	0.83	-0.4
4,080,735	+		Sama_3449	0.86	+0.7
4,080,736	-		Sama_3449	0.87	+0.7
4,080,736	-		Sama_3449	0.87	+2.1
4,080,748	+		Sama_3449	0.88	-0.5
4,080,748	+		Sama_3449	0.88	+1.2
4,080,748	+		Sama_3449	0.88	-1.2
4,080,749	-		Sama_3449	0.88	-0.3
4,080,749	-		Sama_3449	0.88	-0.7
4,080,749	-		Sama_3449	0.88	+2.1
4,080,749	-		Sama_3449	0.88	+0.7
4,080,749	-		Sama_3449	0.88	+0.5
4,080,749	-		Sama_3449	0.88	+0.7
4,080,749	-		Sama_3449	0.88	+0.5
4,080,749	-		Sama_3449	0.88	+1.3
4,080,749	-		Sama_3449	0.88	+0.1