Experiment: ER101
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06095 and BWI76_RS06100 are separated by 200 nucleotides BWI76_RS06100 and BWI76_RS06105 are separated by 117 nucleotides BWI76_RS06105 and BWI76_RS06110 are separated by 18 nucleotides
BWI76_RS06095: BWI76_RS06095 - D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH, at 1,281,598 to 1,282,758
_RS06095
BWI76_RS06100: BWI76_RS06100 - isochorismatase family protein, at 1,282,959 to 1,283,492
_RS06100
BWI76_RS06105: BWI76_RS06105 - microcin B17 transporter, at 1,283,610 to 1,284,830
_RS06105
BWI76_RS06110: BWI76_RS06110 - hypothetical protein, at 1,284,849 to 1,285,955
_RS06110
Position (kb)
1283
1284
1285 Strain fitness (log2 ratio)
-1
0
1
2 at 1282.682 kb on + strand at 1282.716 kb on + strand at 1282.990 kb on - strand at 1283.110 kb on + strand, within BWI76_RS06100 at 1283.274 kb on + strand, within BWI76_RS06100 at 1283.407 kb on - strand, within BWI76_RS06100 at 1283.413 kb on + strand, within BWI76_RS06100 at 1283.427 kb on + strand, within BWI76_RS06100 at 1283.486 kb on + strand at 1283.542 kb on + strand at 1283.573 kb on - strand at 1283.601 kb on - strand at 1283.665 kb on + strand at 1283.723 kb on - strand at 1283.836 kb on - strand, within BWI76_RS06105 at 1283.963 kb on + strand, within BWI76_RS06105 at 1284.006 kb on - strand, within BWI76_RS06105 at 1284.006 kb on - strand, within BWI76_RS06105 at 1284.064 kb on - strand, within BWI76_RS06105 at 1284.210 kb on + strand, within BWI76_RS06105 at 1284.389 kb on + strand, within BWI76_RS06105 at 1284.402 kb on - strand, within BWI76_RS06105 at 1284.461 kb on - strand, within BWI76_RS06105 at 1284.466 kb on - strand, within BWI76_RS06105 at 1284.510 kb on - strand, within BWI76_RS06105 at 1284.512 kb on + strand, within BWI76_RS06105 at 1284.660 kb on - strand, within BWI76_RS06105 at 1284.722 kb on + strand at 1284.780 kb on - strand at 1284.793 kb on + strand at 1284.840 kb on + strand at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.274 kb on - strand, within BWI76_RS06110 at 1285.482 kb on + strand, within BWI76_RS06110
Per-strain Table
Position Strand Gene LocusTag Fraction ER101 remove 1,282,682 + +0.5 1,282,716 + +0.5 1,282,990 - -0.2 1,283,110 + BWI76_RS06100 0.28 +0.3 1,283,274 + BWI76_RS06100 0.59 -0.5 1,283,407 - BWI76_RS06100 0.84 -0.4 1,283,413 + BWI76_RS06100 0.85 -0.4 1,283,427 + BWI76_RS06100 0.88 -0.5 1,283,486 + -1.5 1,283,542 + +1.7 1,283,573 - +0.2 1,283,601 - +1.4 1,283,665 + +1.3 1,283,723 - +0.2 1,283,836 - BWI76_RS06105 0.19 -0.7 1,283,963 + BWI76_RS06105 0.29 +0.7 1,284,006 - BWI76_RS06105 0.32 +1.1 1,284,006 - BWI76_RS06105 0.32 +0.3 1,284,064 - BWI76_RS06105 0.37 +0.4 1,284,210 + BWI76_RS06105 0.49 +0.8 1,284,389 + BWI76_RS06105 0.64 +0.4 1,284,402 - BWI76_RS06105 0.65 +0.9 1,284,461 - BWI76_RS06105 0.70 -0.1 1,284,466 - BWI76_RS06105 0.70 +0.8 1,284,510 - BWI76_RS06105 0.74 +0.8 1,284,512 + BWI76_RS06105 0.74 +0.4 1,284,660 - BWI76_RS06105 0.86 -0.2 1,284,722 + +1.1 1,284,780 - +0.3 1,284,793 + -0.9 1,284,840 + +0.5 1,285,266 + BWI76_RS06110 0.38 -0.2 1,285,266 + BWI76_RS06110 0.38 +2.7 1,285,266 + BWI76_RS06110 0.38 -1.0 1,285,266 + BWI76_RS06110 0.38 +0.9 1,285,274 - BWI76_RS06110 0.38 +0.3 1,285,482 + BWI76_RS06110 0.57 +1.8
Or see this region's nucleotide sequence