Experiment: ER72
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03440 and BWI76_RS03445 are separated by 144 nucleotides BWI76_RS03445 and BWI76_RS03450 are separated by 566 nucleotides
BWI76_RS03440: BWI76_RS03440 - MFS transporter, at 707,547 to 708,998
_RS03440
BWI76_RS03445: BWI76_RS03445 - hypothetical protein, at 709,143 to 710,792
_RS03445
BWI76_RS03450: BWI76_RS03450 - MFS transporter, at 711,359 to 712,723
_RS03450
Position (kb) 709
710
711 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 708.190 kb on - strand, within BWI76_RS03440 at 708.287 kb on - strand, within BWI76_RS03440 at 708.304 kb on + strand, within BWI76_RS03440 at 708.517 kb on + strand, within BWI76_RS03440 at 708.550 kb on + strand, within BWI76_RS03440 at 708.599 kb on + strand, within BWI76_RS03440 at 708.599 kb on + strand, within BWI76_RS03440 at 708.643 kb on + strand, within BWI76_RS03440 at 708.674 kb on - strand, within BWI76_RS03440 at 708.748 kb on + strand, within BWI76_RS03440 at 708.779 kb on + strand, within BWI76_RS03440 at 708.809 kb on + strand, within BWI76_RS03440 at 708.908 kb on + strand at 708.913 kb on + strand at 708.921 kb on - strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.924 kb on + strand at 708.931 kb on + strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.932 kb on - strand at 708.936 kb on + strand at 708.940 kb on - strand at 708.941 kb on - strand at 708.960 kb on - strand at 709.005 kb on - strand at 709.005 kb on - strand at 709.019 kb on - strand at 709.021 kb on + strand at 709.021 kb on + strand at 709.029 kb on - strand at 709.040 kb on - strand at 709.042 kb on + strand at 709.042 kb on + strand at 709.045 kb on - strand at 709.045 kb on - strand at 709.052 kb on + strand at 709.055 kb on - strand at 709.055 kb on - strand at 709.216 kb on - strand at 709.226 kb on + strand at 709.230 kb on + strand at 709.236 kb on + strand at 709.244 kb on + strand at 709.249 kb on + strand at 709.249 kb on + strand at 709.249 kb on + strand at 709.257 kb on - strand at 709.267 kb on + strand at 709.275 kb on - strand at 709.306 kb on + strand at 709.319 kb on - strand, within BWI76_RS03445 at 709.465 kb on + strand, within BWI76_RS03445 at 709.465 kb on + strand, within BWI76_RS03445 at 709.473 kb on - strand, within BWI76_RS03445 at 709.473 kb on - strand, within BWI76_RS03445 at 709.483 kb on - strand, within BWI76_RS03445 at 709.707 kb on + strand, within BWI76_RS03445 at 709.710 kb on - strand, within BWI76_RS03445 at 709.755 kb on - strand, within BWI76_RS03445 at 709.945 kb on - strand, within BWI76_RS03445 at 709.952 kb on + strand, within BWI76_RS03445 at 710.012 kb on - strand, within BWI76_RS03445 at 710.132 kb on + strand, within BWI76_RS03445 at 710.389 kb on + strand, within BWI76_RS03445 at 710.447 kb on - strand, within BWI76_RS03445 at 710.616 kb on + strand, within BWI76_RS03445 at 710.621 kb on + strand, within BWI76_RS03445 at 710.627 kb on + strand, within BWI76_RS03445 at 710.667 kb on - strand at 710.806 kb on + strand at 710.857 kb on - strand at 711.058 kb on - strand at 711.302 kb on + strand at 711.388 kb on - strand at 711.439 kb on + strand at 711.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ER72 remove 708,190 - BWI76_RS03440 0.44 -0.4 708,287 - BWI76_RS03440 0.51 +2.3 708,304 + BWI76_RS03440 0.52 +0.1 708,517 + BWI76_RS03440 0.67 +1.6 708,550 + BWI76_RS03440 0.69 +0.5 708,599 + BWI76_RS03440 0.72 +0.4 708,599 + BWI76_RS03440 0.72 +2.3 708,643 + BWI76_RS03440 0.75 -0.4 708,674 - BWI76_RS03440 0.78 -0.1 708,748 + BWI76_RS03440 0.83 +0.6 708,779 + BWI76_RS03440 0.85 +3.3 708,809 + BWI76_RS03440 0.87 -1.2 708,908 + +0.0 708,913 + +0.8 708,921 - +1.2 708,924 + -0.1 708,924 + -2.0 708,924 + +0.1 708,924 + -0.2 708,924 + +0.5 708,924 + +1.6 708,924 + +0.3 708,924 + +2.3 708,924 + +2.0 708,924 + -0.6 708,931 + -0.3 708,932 - -0.0 708,932 - +0.2 708,932 - -1.1 708,932 - -0.2 708,932 - +1.7 708,932 - -0.2 708,932 - -0.5 708,932 - -0.2 708,932 - +4.3 708,936 + -1.9 708,940 - -0.6 708,941 - -0.1 708,960 - +0.3 709,005 - +2.0 709,005 - -0.4 709,019 - -1.7 709,021 + -0.3 709,021 + +1.0 709,029 - +1.1 709,040 - -0.9 709,042 + +1.5 709,042 + +0.3 709,045 - -0.4 709,045 - -0.0 709,052 + +1.6 709,055 - -0.1 709,055 - +2.3 709,216 - +1.5 709,226 + -1.0 709,230 + +2.3 709,236 + +1.4 709,244 + -0.7 709,249 + +3.9 709,249 + -0.9 709,249 + +0.3 709,257 - -0.1 709,267 + -1.3 709,275 - +0.1 709,306 + -1.1 709,319 - BWI76_RS03445 0.11 -0.2 709,465 + BWI76_RS03445 0.20 +0.5 709,465 + BWI76_RS03445 0.20 +1.4 709,473 - BWI76_RS03445 0.20 +0.0 709,473 - BWI76_RS03445 0.20 -0.5 709,483 - BWI76_RS03445 0.21 +3.9 709,707 + BWI76_RS03445 0.34 +0.9 709,710 - BWI76_RS03445 0.34 +1.2 709,755 - BWI76_RS03445 0.37 +1.0 709,945 - BWI76_RS03445 0.49 -0.8 709,952 + BWI76_RS03445 0.49 +0.5 710,012 - BWI76_RS03445 0.53 +1.0 710,132 + BWI76_RS03445 0.60 -0.1 710,389 + BWI76_RS03445 0.76 +3.1 710,447 - BWI76_RS03445 0.79 +0.8 710,616 + BWI76_RS03445 0.89 -1.5 710,621 + BWI76_RS03445 0.90 +0.5 710,627 + BWI76_RS03445 0.90 -0.3 710,667 - +0.3 710,806 + -0.8 710,857 - -1.8 711,058 - -0.2 711,302 + -0.7 711,388 - +0.3 711,439 + +0.0 711,461 - +0.6
Or see this region's nucleotide sequence