Experiment: ER30
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03930 and BWI76_RS03935 are separated by 179 nucleotides BWI76_RS03935 and BWI76_RS03940 are separated by 139 nucleotides
BWI76_RS03930: BWI76_RS03930 - MFS transporter, at 811,514 to 812,875
_RS03930
BWI76_RS03935: BWI76_RS03935 - GntR family transcriptional regulator, at 813,055 to 813,969
_RS03935
BWI76_RS03940: BWI76_RS03940 - alcohol dehydrogenase, at 814,109 to 815,131
_RS03940
Position (kb) 813
814 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 812.059 kb on + strand, within BWI76_RS03930 at 812.212 kb on + strand, within BWI76_RS03930 at 812.351 kb on - strand, within BWI76_RS03930 at 812.358 kb on + strand, within BWI76_RS03930 at 812.366 kb on - strand, within BWI76_RS03930 at 812.366 kb on - strand, within BWI76_RS03930 at 812.432 kb on - strand, within BWI76_RS03930 at 812.509 kb on + strand, within BWI76_RS03930 at 812.511 kb on + strand, within BWI76_RS03930 at 812.519 kb on - strand, within BWI76_RS03930 at 812.560 kb on + strand, within BWI76_RS03930 at 812.570 kb on - strand, within BWI76_RS03930 at 812.578 kb on - strand, within BWI76_RS03930 at 812.578 kb on - strand, within BWI76_RS03930 at 812.599 kb on - strand at 812.604 kb on + strand, within BWI76_RS03930 at 812.604 kb on + strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.612 kb on - strand, within BWI76_RS03930 at 812.624 kb on + strand, within BWI76_RS03930 at 812.634 kb on + strand, within BWI76_RS03930 at 812.647 kb on - strand, within BWI76_RS03930 at 812.656 kb on + strand, within BWI76_RS03930 at 812.664 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.665 kb on - strand, within BWI76_RS03930 at 812.689 kb on - strand, within BWI76_RS03930 at 812.692 kb on + strand, within BWI76_RS03930 at 812.692 kb on + strand, within BWI76_RS03930 at 812.692 kb on + strand, within BWI76_RS03930 at 812.693 kb on + strand, within BWI76_RS03930 at 812.700 kb on - strand, within BWI76_RS03930 at 812.701 kb on - strand, within BWI76_RS03930 at 812.703 kb on - strand, within BWI76_RS03930 at 812.722 kb on - strand, within BWI76_RS03930 at 812.798 kb on - strand at 812.875 kb on + strand at 812.890 kb on - strand at 812.921 kb on + strand at 812.921 kb on + strand at 812.921 kb on + strand at 812.921 kb on + strand at 812.929 kb on - strand at 812.929 kb on - strand at 812.945 kb on - strand at 812.999 kb on + strand at 813.007 kb on - strand at 813.007 kb on - strand at 813.021 kb on - strand at 813.040 kb on + strand at 813.059 kb on - strand at 813.059 kb on - strand at 813.067 kb on + strand at 813.076 kb on - strand at 813.078 kb on + strand at 813.078 kb on + strand at 813.084 kb on - strand at 813.086 kb on + strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.086 kb on - strand at 813.107 kb on + strand at 813.110 kb on + strand at 813.110 kb on + strand at 813.112 kb on + strand at 813.112 kb on + strand at 813.118 kb on - strand at 813.119 kb on + strand at 813.119 kb on + strand at 813.119 kb on + strand at 813.119 kb on + strand at 813.120 kb on - strand at 813.129 kb on + strand at 813.129 kb on + strand at 813.129 kb on - strand at 813.132 kb on - strand at 813.135 kb on + strand at 813.155 kb on + strand, within BWI76_RS03935 at 813.213 kb on + strand, within BWI76_RS03935 at 813.213 kb on + strand, within BWI76_RS03935 at 813.401 kb on + strand, within BWI76_RS03935 at 813.409 kb on - strand, within BWI76_RS03935 at 813.439 kb on + strand, within BWI76_RS03935 at 813.448 kb on + strand, within BWI76_RS03935 at 813.448 kb on + strand, within BWI76_RS03935 at 813.456 kb on - strand, within BWI76_RS03935 at 813.500 kb on + strand, within BWI76_RS03935 at 813.508 kb on - strand, within BWI76_RS03935 at 813.508 kb on - strand, within BWI76_RS03935 at 813.508 kb on - strand, within BWI76_RS03935 at 813.510 kb on + strand, within BWI76_RS03935 at 813.513 kb on - strand, within BWI76_RS03935 at 813.605 kb on - strand, within BWI76_RS03935 at 813.753 kb on + strand, within BWI76_RS03935 at 813.781 kb on - strand, within BWI76_RS03935 at 813.782 kb on + strand, within BWI76_RS03935 at 813.801 kb on - strand, within BWI76_RS03935 at 813.845 kb on - strand, within BWI76_RS03935 at 813.853 kb on + strand, within BWI76_RS03935 at 813.860 kb on + strand, within BWI76_RS03935 at 813.883 kb on + strand at 813.883 kb on + strand at 813.883 kb on + strand at 813.891 kb on - strand at 813.891 kb on - strand at 813.891 kb on - strand at 813.925 kb on + strand at 813.930 kb on + strand at 813.930 kb on + strand at 813.930 kb on + strand at 813.930 kb on + strand at 813.930 kb on + strand at 813.931 kb on + strand at 813.935 kb on + strand at 813.938 kb on - strand at 813.938 kb on - strand at 813.938 kb on - strand at 813.938 kb on - strand at 813.938 kb on - strand at 813.938 kb on - strand at 813.938 kb on - strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.964 kb on + strand at 813.970 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.972 kb on - strand at 813.975 kb on - strand at 814.035 kb on - strand at 814.053 kb on + strand at 814.068 kb on - strand at 814.078 kb on + strand at 814.114 kb on + strand at 814.132 kb on - strand at 814.137 kb on - strand at 814.243 kb on + strand, within BWI76_RS03940 at 814.245 kb on + strand, within BWI76_RS03940 at 814.265 kb on + strand, within BWI76_RS03940 at 814.308 kb on + strand, within BWI76_RS03940 at 814.356 kb on + strand, within BWI76_RS03940 at 814.361 kb on + strand, within BWI76_RS03940 at 814.369 kb on - strand at 814.391 kb on + strand, within BWI76_RS03940 at 814.391 kb on + strand, within BWI76_RS03940 at 814.391 kb on + strand, within BWI76_RS03940 at 814.392 kb on - strand, within BWI76_RS03940 at 814.398 kb on - strand, within BWI76_RS03940 at 814.399 kb on - strand, within BWI76_RS03940 at 814.399 kb on - strand, within BWI76_RS03940 at 814.399 kb on - strand, within BWI76_RS03940 at 814.399 kb on - strand, within BWI76_RS03940 at 814.399 kb on - strand, within BWI76_RS03940 at 814.399 kb on - strand, within BWI76_RS03940 at 814.401 kb on + strand, within BWI76_RS03940 at 814.409 kb on - strand, within BWI76_RS03940 at 814.472 kb on - strand, within BWI76_RS03940 at 814.540 kb on + strand, within BWI76_RS03940 at 814.549 kb on - strand, within BWI76_RS03940 at 814.630 kb on - strand, within BWI76_RS03940 at 814.640 kb on - strand, within BWI76_RS03940 at 814.692 kb on + strand, within BWI76_RS03940 at 814.700 kb on - strand, within BWI76_RS03940 at 814.702 kb on + strand, within BWI76_RS03940 at 814.737 kb on + strand, within BWI76_RS03940 at 814.745 kb on - strand, within BWI76_RS03940 at 814.781 kb on + strand, within BWI76_RS03940 at 814.835 kb on + strand, within BWI76_RS03940 at 814.894 kb on + strand, within BWI76_RS03940 at 814.902 kb on - strand, within BWI76_RS03940 at 814.902 kb on - strand, within BWI76_RS03940 at 814.902 kb on - strand, within BWI76_RS03940
Per-strain Table
Position Strand Gene LocusTag Fraction ER30 remove 812,059 + BWI76_RS03930 0.40 +0.3 812,212 + BWI76_RS03930 0.51 +0.0 812,351 - BWI76_RS03930 0.61 +1.5 812,358 + BWI76_RS03930 0.62 +0.2 812,366 - BWI76_RS03930 0.63 -0.9 812,366 - BWI76_RS03930 0.63 -0.8 812,432 - BWI76_RS03930 0.67 -0.0 812,509 + BWI76_RS03930 0.73 +0.8 812,511 + BWI76_RS03930 0.73 -0.7 812,519 - BWI76_RS03930 0.74 -0.2 812,560 + BWI76_RS03930 0.77 -0.0 812,570 - BWI76_RS03930 0.78 +0.3 812,578 - BWI76_RS03930 0.78 -1.1 812,578 - BWI76_RS03930 0.78 -0.4 812,599 - +4.3 812,604 + BWI76_RS03930 0.80 -0.4 812,604 + BWI76_RS03930 0.80 +0.1 812,612 - BWI76_RS03930 0.81 +2.0 812,612 - BWI76_RS03930 0.81 -0.4 812,612 - BWI76_RS03930 0.81 -0.1 812,612 - BWI76_RS03930 0.81 +3.0 812,612 - BWI76_RS03930 0.81 -0.1 812,624 + BWI76_RS03930 0.81 -0.4 812,634 + BWI76_RS03930 0.82 -0.4 812,647 - BWI76_RS03930 0.83 +0.4 812,656 + BWI76_RS03930 0.84 -2.3 812,664 - BWI76_RS03930 0.84 +0.7 812,665 - BWI76_RS03930 0.85 -0.9 812,665 - BWI76_RS03930 0.85 -0.8 812,665 - BWI76_RS03930 0.85 -0.5 812,665 - BWI76_RS03930 0.85 -0.0 812,665 - BWI76_RS03930 0.85 -0.9 812,665 - BWI76_RS03930 0.85 +0.6 812,665 - BWI76_RS03930 0.85 -1.1 812,689 - BWI76_RS03930 0.86 +2.0 812,692 + BWI76_RS03930 0.86 -1.2 812,692 + BWI76_RS03930 0.86 +0.5 812,692 + BWI76_RS03930 0.86 -0.8 812,693 + BWI76_RS03930 0.87 -1.7 812,700 - BWI76_RS03930 0.87 +0.4 812,701 - BWI76_RS03930 0.87 +1.6 812,703 - BWI76_RS03930 0.87 +0.1 812,722 - BWI76_RS03930 0.89 +0.1 812,798 - +0.5 812,875 + -0.1 812,890 - +0.1 812,921 + -1.7 812,921 + -0.3 812,921 + -0.6 812,921 + -1.1 812,929 - -0.5 812,929 - +0.2 812,945 - -0.4 812,999 + +2.0 813,007 - +1.0 813,007 - -1.2 813,021 - -0.4 813,040 + -1.0 813,059 - +0.5 813,059 - +0.8 813,067 + -0.3 813,076 - +2.0 813,078 + +1.8 813,078 + +0.0 813,084 - -0.6 813,086 + +0.0 813,086 - -1.7 813,086 - -1.1 813,086 - -1.8 813,086 - +0.8 813,086 - +0.5 813,107 + +0.2 813,110 + +2.8 813,110 + +0.2 813,112 + +1.0 813,112 + -1.8 813,118 - +1.7 813,119 + +1.4 813,119 + +0.4 813,119 + -0.6 813,119 + +0.1 813,120 - +3.6 813,129 + -1.6 813,129 + +1.5 813,129 - -1.7 813,132 - -1.2 813,135 + +0.7 813,155 + BWI76_RS03935 0.11 -1.0 813,213 + BWI76_RS03935 0.17 +1.2 813,213 + BWI76_RS03935 0.17 +0.2 813,401 + BWI76_RS03935 0.38 +4.0 813,409 - BWI76_RS03935 0.39 +1.2 813,439 + BWI76_RS03935 0.42 +0.4 813,448 + BWI76_RS03935 0.43 -1.1 813,448 + BWI76_RS03935 0.43 -0.3 813,456 - BWI76_RS03935 0.44 -0.3 813,500 + BWI76_RS03935 0.49 +3.6 813,508 - BWI76_RS03935 0.50 +1.0 813,508 - BWI76_RS03935 0.50 +1.1 813,508 - BWI76_RS03935 0.50 -0.2 813,510 + BWI76_RS03935 0.50 -0.9 813,513 - BWI76_RS03935 0.50 +2.7 813,605 - BWI76_RS03935 0.60 +0.1 813,753 + BWI76_RS03935 0.76 +0.9 813,781 - BWI76_RS03935 0.79 +1.7 813,782 + BWI76_RS03935 0.79 +1.2 813,801 - BWI76_RS03935 0.82 +0.6 813,845 - BWI76_RS03935 0.86 +0.0 813,853 + BWI76_RS03935 0.87 +2.0 813,860 + BWI76_RS03935 0.88 +0.9 813,883 + -0.8 813,883 + -0.6 813,883 + +0.1 813,891 - -0.3 813,891 - +1.8 813,891 - -0.7 813,925 + +1.5 813,930 + +1.8 813,930 + +1.1 813,930 + -0.1 813,930 + -1.0 813,930 + -0.6 813,931 + +4.8 813,935 + +2.0 813,938 - -0.6 813,938 - +0.8 813,938 - -0.4 813,938 - -1.0 813,938 - +3.2 813,938 - -0.5 813,938 - -0.4 813,964 + -0.0 813,964 + +0.6 813,964 + +1.5 813,964 + +0.2 813,964 + -0.0 813,964 + -1.3 813,964 + +0.9 813,964 + -0.0 813,964 + +0.1 813,964 + +0.0 813,970 - -0.5 813,972 - -0.4 813,972 - -0.3 813,972 - -0.4 813,972 - -3.0 813,972 - -0.2 813,972 - -2.2 813,972 - +0.1 813,972 - +1.5 813,972 - +0.7 813,972 - -0.9 813,972 - +1.0 813,972 - +1.4 813,972 - -0.6 813,972 - +1.5 813,972 - +0.4 813,972 - -0.6 813,972 - -1.3 813,975 - +1.0 814,035 - -0.3 814,053 + -0.8 814,068 - +2.8 814,078 + +0.5 814,114 + -6.0 814,132 - +1.1 814,137 - -0.2 814,243 + BWI76_RS03940 0.13 +0.4 814,245 + BWI76_RS03940 0.13 +0.6 814,265 + BWI76_RS03940 0.15 +2.6 814,308 + BWI76_RS03940 0.19 -1.0 814,356 + BWI76_RS03940 0.24 -0.3 814,361 + BWI76_RS03940 0.25 +1.6 814,369 - -0.6 814,391 + BWI76_RS03940 0.28 -1.1 814,391 + BWI76_RS03940 0.28 -0.3 814,391 + BWI76_RS03940 0.28 +0.3 814,392 - BWI76_RS03940 0.28 -0.3 814,398 - BWI76_RS03940 0.28 +1.1 814,399 - BWI76_RS03940 0.28 -2.1 814,399 - BWI76_RS03940 0.28 -1.0 814,399 - BWI76_RS03940 0.28 +1.1 814,399 - BWI76_RS03940 0.28 +0.4 814,399 - BWI76_RS03940 0.28 -0.2 814,399 - BWI76_RS03940 0.28 +0.7 814,401 + BWI76_RS03940 0.29 +1.6 814,409 - BWI76_RS03940 0.29 +0.6 814,472 - BWI76_RS03940 0.35 -0.3 814,540 + BWI76_RS03940 0.42 +1.0 814,549 - BWI76_RS03940 0.43 -2.1 814,630 - BWI76_RS03940 0.51 +0.1 814,640 - BWI76_RS03940 0.52 -0.2 814,692 + BWI76_RS03940 0.57 -0.5 814,700 - BWI76_RS03940 0.58 -0.6 814,702 + BWI76_RS03940 0.58 -1.2 814,737 + BWI76_RS03940 0.61 +0.2 814,745 - BWI76_RS03940 0.62 +0.2 814,781 + BWI76_RS03940 0.66 +2.0 814,835 + BWI76_RS03940 0.71 -0.1 814,894 + BWI76_RS03940 0.77 +0.7 814,902 - BWI76_RS03940 0.78 +1.1 814,902 - BWI76_RS03940 0.78 -0.8 814,902 - BWI76_RS03940 0.78 -0.2
Or see this region's nucleotide sequence