Experiment: KP4_E4_R2_1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02900 and BWI76_RS02905 are separated by 22 nucleotides BWI76_RS02905 and BWI76_RS02910 are separated by 45 nucleotides
BWI76_RS02900: BWI76_RS02900 - 6-phosphogluconolactonase, at 591,631 to 592,782
_RS02900
BWI76_RS02905: BWI76_RS02905 - transcriptional regulator, at 592,805 to 594,715
_RS02905
BWI76_RS02910: BWI76_RS02910 - hypothetical protein, at 594,761 to 595,153
_RS02910
Position (kb) 592
593
594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 591.855 kb on - strand, within BWI76_RS02900 at 592.046 kb on + strand, within BWI76_RS02900 at 592.049 kb on - strand, within BWI76_RS02900 at 592.327 kb on + strand, within BWI76_RS02900 at 592.349 kb on + strand, within BWI76_RS02900 at 592.357 kb on - strand, within BWI76_RS02900 at 592.463 kb on - strand, within BWI76_RS02900 at 592.475 kb on + strand, within BWI76_RS02900 at 592.486 kb on + strand, within BWI76_RS02900 at 592.494 kb on - strand, within BWI76_RS02900 at 592.509 kb on + strand, within BWI76_RS02900 at 592.548 kb on + strand, within BWI76_RS02900 at 592.591 kb on + strand, within BWI76_RS02900 at 592.728 kb on + strand at 592.728 kb on + strand at 592.769 kb on - strand at 592.776 kb on + strand at 592.776 kb on + strand at 592.837 kb on + strand at 592.951 kb on - strand at 592.956 kb on - strand at 593.019 kb on + strand, within BWI76_RS02905 at 593.176 kb on - strand, within BWI76_RS02905 at 593.233 kb on - strand at 593.255 kb on - strand, within BWI76_RS02905 at 593.257 kb on + strand, within BWI76_RS02905 at 593.362 kb on - strand, within BWI76_RS02905 at 593.409 kb on + strand at 593.869 kb on + strand, within BWI76_RS02905 at 593.912 kb on - strand, within BWI76_RS02905 at 593.940 kb on + strand, within BWI76_RS02905 at 594.030 kb on - strand, within BWI76_RS02905 at 594.110 kb on - strand, within BWI76_RS02905 at 594.117 kb on + strand, within BWI76_RS02905 at 594.125 kb on - strand, within BWI76_RS02905 at 594.206 kb on - strand, within BWI76_RS02905 at 594.345 kb on + strand, within BWI76_RS02905 at 594.355 kb on + strand, within BWI76_RS02905 at 594.415 kb on + strand, within BWI76_RS02905 at 594.423 kb on - strand, within BWI76_RS02905 at 594.435 kb on - strand, within BWI76_RS02905 at 594.468 kb on + strand, within BWI76_RS02905 at 594.476 kb on - strand, within BWI76_RS02905 at 594.560 kb on - strand at 594.585 kb on + strand at 594.661 kb on - strand at 594.676 kb on + strand at 594.676 kb on + strand at 594.684 kb on - strand at 594.782 kb on - strand at 594.797 kb on + strand at 594.828 kb on + strand, within BWI76_RS02910 at 594.881 kb on + strand, within BWI76_RS02910 at 594.928 kb on + strand, within BWI76_RS02910 at 594.971 kb on - strand, within BWI76_RS02910 at 594.983 kb on - strand, within BWI76_RS02910 at 594.998 kb on - strand, within BWI76_RS02910 at 595.026 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.060 kb on + strand, within BWI76_RS02910 at 595.061 kb on + strand, within BWI76_RS02910 at 595.063 kb on - strand, within BWI76_RS02910 at 595.063 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.068 kb on - strand, within BWI76_RS02910 at 595.070 kb on + strand, within BWI76_RS02910 at 595.070 kb on + strand, within BWI76_RS02910 at 595.070 kb on + strand, within BWI76_RS02910 at 595.073 kb on - strand, within BWI76_RS02910 at 595.073 kb on - strand, within BWI76_RS02910 at 595.073 kb on - strand, within BWI76_RS02910 at 595.073 kb on - strand, within BWI76_RS02910 at 595.075 kb on + strand, within BWI76_RS02910 at 595.078 kb on - strand, within BWI76_RS02910 at 595.104 kb on - strand, within BWI76_RS02910 at 595.104 kb on - strand, within BWI76_RS02910 at 595.110 kb on - strand, within BWI76_RS02910 at 595.110 kb on - strand, within BWI76_RS02910 at 595.115 kb on + strand at 595.115 kb on - strand at 595.123 kb on - strand at 595.123 kb on - strand at 595.123 kb on - strand at 595.130 kb on + strand at 595.131 kb on + strand at 595.138 kb on + strand at 595.138 kb on + strand at 595.138 kb on + strand at 595.138 kb on + strand at 595.146 kb on - strand at 595.146 kb on - strand at 595.146 kb on - strand at 595.148 kb on + strand at 595.151 kb on + strand at 595.155 kb on + strand at 595.155 kb on + strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.156 kb on - strand at 595.157 kb on - strand at 595.160 kb on + strand at 595.163 kb on - strand at 595.165 kb on + strand at 595.169 kb on - strand at 595.169 kb on - strand at 595.179 kb on - strand at 595.187 kb on - strand at 595.194 kb on - strand at 595.200 kb on + strand at 595.200 kb on + strand at 595.208 kb on - strand at 595.208 kb on - strand at 595.251 kb on - strand at 595.251 kb on - strand at 595.251 kb on - strand at 595.261 kb on - strand at 595.305 kb on + strand at 595.315 kb on + strand at 595.334 kb on + strand at 595.334 kb on - strand at 595.340 kb on - strand at 595.444 kb on + strand at 595.444 kb on + strand at 595.444 kb on + strand at 595.444 kb on + strand at 595.444 kb on + strand at 595.452 kb on - strand at 595.452 kb on - strand at 595.500 kb on + strand at 595.508 kb on - strand at 595.508 kb on - strand at 595.545 kb on + strand at 595.545 kb on + strand at 595.545 kb on + strand at 595.546 kb on + strand at 595.546 kb on + strand at 595.546 kb on + strand at 595.546 kb on + strand at 595.546 kb on + strand at 595.546 kb on + strand at 595.546 kb on + strand at 595.554 kb on - strand at 595.554 kb on - strand at 595.554 kb on - strand at 595.598 kb on - strand at 595.623 kb on + strand at 595.623 kb on + strand at 595.623 kb on + strand at 595.623 kb on + strand at 595.680 kb on + strand at 595.680 kb on + strand at 595.680 kb on + strand at 595.680 kb on + strand at 595.680 kb on + strand at 595.680 kb on + strand at 595.680 kb on + strand at 595.690 kb on + strand at 595.698 kb on - strand at 595.700 kb on + strand at 595.700 kb on + strand at 595.700 kb on + strand at 595.700 kb on + strand at 595.700 kb on + strand at 595.700 kb on + strand at 595.708 kb on - strand at 595.708 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KP4_E4_R2_1 remove 591,855 - BWI76_RS02900 0.19 -2.2 592,046 + BWI76_RS02900 0.36 +0.1 592,049 - BWI76_RS02900 0.36 -2.0 592,327 + BWI76_RS02900 0.60 +1.1 592,349 + BWI76_RS02900 0.62 -0.2 592,357 - BWI76_RS02900 0.63 -0.9 592,463 - BWI76_RS02900 0.72 +2.1 592,475 + BWI76_RS02900 0.73 -1.7 592,486 + BWI76_RS02900 0.74 +0.6 592,494 - BWI76_RS02900 0.75 +0.6 592,509 + BWI76_RS02900 0.76 +0.1 592,548 + BWI76_RS02900 0.80 +4.2 592,591 + BWI76_RS02900 0.83 -0.4 592,728 + +0.4 592,728 + -2.4 592,769 - -0.2 592,776 + +0.7 592,776 + -0.3 592,837 + -0.4 592,951 - +1.2 592,956 - -3.4 593,019 + BWI76_RS02905 0.11 +0.1 593,176 - BWI76_RS02905 0.19 -0.3 593,233 - +0.5 593,255 - BWI76_RS02905 0.24 -0.2 593,257 + BWI76_RS02905 0.24 -3.0 593,362 - BWI76_RS02905 0.29 -1.8 593,409 + +2.1 593,869 + BWI76_RS02905 0.56 +2.1 593,912 - BWI76_RS02905 0.58 +0.1 593,940 + BWI76_RS02905 0.59 -0.4 594,030 - BWI76_RS02905 0.64 -1.3 594,110 - BWI76_RS02905 0.68 -0.1 594,117 + BWI76_RS02905 0.69 +2.7 594,125 - BWI76_RS02905 0.69 -0.9 594,206 - BWI76_RS02905 0.73 -2.7 594,345 + BWI76_RS02905 0.81 -1.6 594,355 + BWI76_RS02905 0.81 -0.2 594,415 + BWI76_RS02905 0.84 -1.0 594,423 - BWI76_RS02905 0.85 +1.0 594,435 - BWI76_RS02905 0.85 -0.5 594,468 + BWI76_RS02905 0.87 -0.8 594,476 - BWI76_RS02905 0.87 -0.8 594,560 - +0.2 594,585 + -1.1 594,661 - -0.3 594,676 + -0.1 594,676 + -1.6 594,684 - +0.6 594,782 - -0.6 594,797 + -0.1 594,828 + BWI76_RS02910 0.17 -1.0 594,881 + BWI76_RS02910 0.31 +0.4 594,928 + BWI76_RS02910 0.42 +3.1 594,971 - BWI76_RS02910 0.53 +1.8 594,983 - BWI76_RS02910 0.56 -0.9 594,998 - BWI76_RS02910 0.60 -1.7 595,026 + BWI76_RS02910 0.67 -1.2 595,060 + BWI76_RS02910 0.76 -2.0 595,060 + BWI76_RS02910 0.76 -1.9 595,060 + BWI76_RS02910 0.76 -2.2 595,060 + +2.1 595,060 + BWI76_RS02910 0.76 -0.8 595,060 + BWI76_RS02910 0.76 -1.2 595,060 + BWI76_RS02910 0.76 +1.0 595,060 + BWI76_RS02910 0.76 +3.4 595,060 + BWI76_RS02910 0.76 +3.2 595,060 + BWI76_RS02910 0.76 +0.4 595,060 + BWI76_RS02910 0.76 +5.4 595,060 + BWI76_RS02910 0.76 +0.3 595,060 + BWI76_RS02910 0.76 +3.1 595,061 + BWI76_RS02910 0.76 +1.1 595,063 - BWI76_RS02910 0.77 +0.4 595,063 - BWI76_RS02910 0.77 +0.4 595,068 - BWI76_RS02910 0.78 -1.2 595,068 - BWI76_RS02910 0.78 +2.1 595,068 - BWI76_RS02910 0.78 +1.2 595,068 - BWI76_RS02910 0.78 -0.0 595,068 - BWI76_RS02910 0.78 +3.7 595,068 - BWI76_RS02910 0.78 -0.4 595,068 - BWI76_RS02910 0.78 +2.1 595,068 - BWI76_RS02910 0.78 +0.1 595,068 - BWI76_RS02910 0.78 +0.3 595,068 - BWI76_RS02910 0.78 -0.5 595,068 - BWI76_RS02910 0.78 -0.1 595,068 - BWI76_RS02910 0.78 -3.4 595,068 - BWI76_RS02910 0.78 -0.6 595,068 - BWI76_RS02910 0.78 -0.2 595,068 - BWI76_RS02910 0.78 -2.1 595,070 + BWI76_RS02910 0.79 +0.3 595,070 + BWI76_RS02910 0.79 -1.1 595,070 + BWI76_RS02910 0.79 +1.4 595,073 - BWI76_RS02910 0.79 -1.5 595,073 - BWI76_RS02910 0.79 -2.4 595,073 - BWI76_RS02910 0.79 +1.1 595,073 - BWI76_RS02910 0.79 +0.3 595,075 + BWI76_RS02910 0.80 -0.2 595,078 - BWI76_RS02910 0.81 +0.1 595,104 - BWI76_RS02910 0.87 +2.1 595,104 - BWI76_RS02910 0.87 +0.8 595,110 - BWI76_RS02910 0.89 -0.4 595,110 - BWI76_RS02910 0.89 -1.0 595,115 + +0.5 595,115 - -1.5 595,123 - +0.8 595,123 - +1.3 595,123 - -1.8 595,130 + -2.3 595,131 + +0.8 595,138 + -0.8 595,138 + +0.7 595,138 + -1.7 595,138 + -0.3 595,146 - -0.5 595,146 - +0.8 595,146 - -0.6 595,148 + -0.2 595,151 + -0.5 595,155 + +0.2 595,155 + +0.1 595,156 - -1.1 595,156 - +1.9 595,156 - -0.1 595,156 - +0.5 595,156 - -0.2 595,156 - -1.4 595,156 - +0.9 595,156 - +3.1 595,156 - +1.0 595,156 - +0.9 595,156 - -1.1 595,157 - +0.8 595,160 + -1.1 595,163 - +0.4 595,165 + -0.7 595,169 - -0.2 595,169 - -1.2 595,179 - +2.9 595,187 - -0.3 595,194 - -1.1 595,200 + +1.3 595,200 + +0.6 595,208 - +0.5 595,208 - +1.5 595,251 - +2.1 595,251 - -1.6 595,251 - -0.8 595,261 - -1.4 595,305 + -0.2 595,315 + -0.8 595,334 + +2.1 595,334 - +3.7 595,340 - +3.9 595,444 + +1.2 595,444 + -1.0 595,444 + -1.2 595,444 + -1.3 595,444 + -0.0 595,452 - -2.2 595,452 - +0.5 595,500 + +2.1 595,508 - +0.5 595,508 - +1.3 595,545 + -1.7 595,545 + -0.5 595,545 + +0.7 595,546 + +1.0 595,546 + -2.5 595,546 + +2.1 595,546 + -2.1 595,546 + +1.4 595,546 + -0.6 595,546 + +0.9 595,554 - -1.8 595,554 - +2.8 595,554 - +0.2 595,598 - -2.2 595,623 + +0.4 595,623 + -0.4 595,623 + +0.0 595,623 + -0.6 595,680 + +0.7 595,680 + +1.1 595,680 + -0.9 595,680 + -0.2 595,680 + -0.1 595,680 + -0.5 595,680 + +0.5 595,690 + -0.1 595,698 - +0.9 595,700 + +1.2 595,700 + -0.4 595,700 + +0.7 595,700 + +0.5 595,700 + -1.4 595,700 + -0.4 595,708 - +2.1 595,708 - +0.6
Or see this region's nucleotide sequence