Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02877

Experiment: LB agar plate coculture with Mixed culture; Bacillus megaterium TBS_037 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02875 and MPMX20_02876 are separated by 57 nucleotidesMPMX20_02876 and MPMX20_02877 are separated by 62 nucleotidesMPMX20_02877 and MPMX20_02878 overlap by 4 nucleotidesMPMX20_02878 and MPMX20_02879 are separated by 2 nucleotidesMPMX20_02879 and MPMX20_02880 overlap by 1 nucleotides MPMX20_02875: MPMX20_02875 - hypothetical protein, at 3,030,578 to 3,031,249 _02875 MPMX20_02876: MPMX20_02876 - hypothetical protein, at 3,031,307 to 3,032,050 _02876 MPMX20_02877: MPMX20_02877 - hypothetical protein, at 3,032,113 to 3,032,496 _02877 MPMX20_02878: MPMX20_02878 - hypothetical protein, at 3,032,493 to 3,032,957 _02878 MPMX20_02879: MPMX20_02879 - hypothetical protein, at 3,032,960 to 3,033,310 _02879 MPMX20_02880: MPMX20_02880 - hypothetical protein, at 3,033,310 to 3,033,978 _02880 Position (kb) 3032 3033Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3031.124 kb on - strand, within MPMX20_02875at 3031.124 kb on - strand, within MPMX20_02875at 3031.169 kb on - strand, within MPMX20_02875at 3031.181 kb on - strand, within MPMX20_02875at 3031.214 kb on + strandat 3031.214 kb on + strandat 3031.214 kb on + strandat 3031.253 kb on - strandat 3031.253 kb on - strandat 3031.253 kb on - strandat 3031.278 kb on + strandat 3031.281 kb on - strandat 3031.281 kb on - strandat 3031.315 kb on + strandat 3031.322 kb on + strandat 3031.323 kb on - strandat 3031.323 kb on - strandat 3031.323 kb on - strandat 3031.438 kb on + strand, within MPMX20_02876at 3031.570 kb on - strand, within MPMX20_02876at 3031.608 kb on + strand, within MPMX20_02876at 3031.616 kb on - strand, within MPMX20_02876at 3031.620 kb on + strand, within MPMX20_02876at 3031.728 kb on + strand, within MPMX20_02876at 3031.740 kb on + strand, within MPMX20_02876at 3031.740 kb on + strand, within MPMX20_02876at 3031.742 kb on + strand, within MPMX20_02876at 3031.748 kb on - strand, within MPMX20_02876at 3031.899 kb on - strand, within MPMX20_02876at 3031.906 kb on + strand, within MPMX20_02876at 3031.940 kb on - strand, within MPMX20_02876at 3031.956 kb on + strand, within MPMX20_02876at 3031.956 kb on + strand, within MPMX20_02876at 3032.026 kb on + strandat 3032.197 kb on + strand, within MPMX20_02877at 3032.197 kb on - strand, within MPMX20_02877at 3032.206 kb on - strand, within MPMX20_02877at 3032.233 kb on - strand, within MPMX20_02877at 3032.239 kb on - strand, within MPMX20_02877at 3032.244 kb on - strand, within MPMX20_02877at 3032.262 kb on + strand, within MPMX20_02877at 3032.279 kb on + strand, within MPMX20_02877at 3032.325 kb on + strand, within MPMX20_02877at 3032.332 kb on + strand, within MPMX20_02877at 3032.333 kb on - strand, within MPMX20_02877at 3032.357 kb on - strand, within MPMX20_02877at 3032.366 kb on + strand, within MPMX20_02877at 3032.482 kb on + strandat 3032.482 kb on + strandat 3032.490 kb on - strandat 3032.590 kb on - strand, within MPMX20_02878at 3032.590 kb on - strand, within MPMX20_02878at 3032.592 kb on - strand, within MPMX20_02878at 3032.597 kb on - strand, within MPMX20_02878at 3032.686 kb on + strand, within MPMX20_02878at 3032.686 kb on + strand, within MPMX20_02878at 3032.720 kb on - strand, within MPMX20_02878at 3032.722 kb on + strand, within MPMX20_02878at 3032.754 kb on + strand, within MPMX20_02878at 3032.809 kb on - strand, within MPMX20_02878at 3032.809 kb on - strand, within MPMX20_02878at 3032.809 kb on - strand, within MPMX20_02878at 3032.809 kb on - strand, within MPMX20_02878at 3032.831 kb on - strand, within MPMX20_02878at 3032.831 kb on - strand, within MPMX20_02878at 3032.957 kb on + strandat 3032.966 kb on - strandat 3032.998 kb on + strand, within MPMX20_02879at 3033.042 kb on + strand, within MPMX20_02879at 3033.160 kb on - strand, within MPMX20_02879at 3033.210 kb on + strand, within MPMX20_02879at 3033.290 kb on - strandat 3033.290 kb on - strandat 3033.315 kb on - strandat 3033.315 kb on - strandat 3033.327 kb on - strandat 3033.351 kb on - strandat 3033.361 kb on - strandat 3033.361 kb on - strandat 3033.449 kb on + strand, within MPMX20_02880at 3033.463 kb on + strand, within MPMX20_02880at 3033.465 kb on + strand, within MPMX20_02880at 3033.465 kb on + strand, within MPMX20_02880at 3033.465 kb on + strand, within MPMX20_02880at 3033.465 kb on + strand, within MPMX20_02880at 3033.473 kb on - strand, within MPMX20_02880at 3033.473 kb on - strand, within MPMX20_02880at 3033.476 kb on + strand, within MPMX20_02880at 3033.482 kb on + strand, within MPMX20_02880at 3033.484 kb on - strand, within MPMX20_02880at 3033.484 kb on - strand, within MPMX20_02880at 3033.489 kb on - strand, within MPMX20_02880

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Per-strain Table

Position Strand Gene LocusTag Fraction LB agar plate coculture with Mixed culture; Bacillus megaterium TBS_037 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
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3,031,124 - MPMX20_02875 0.81 -1.8
3,031,124 - MPMX20_02875 0.81 -1.2
3,031,169 - MPMX20_02875 0.88 -1.3
3,031,181 - MPMX20_02875 0.90 -1.4
3,031,214 + -1.0
3,031,214 + -1.5
3,031,214 + -1.0
3,031,253 - -1.5
3,031,253 - -3.3
3,031,253 - -1.3
3,031,278 + -1.5
3,031,281 - -0.8
3,031,281 - -1.7
3,031,315 + -2.9
3,031,322 + -1.1
3,031,323 - -1.2
3,031,323 - -2.2
3,031,323 - -1.6
3,031,438 + MPMX20_02876 0.18 -1.6
3,031,570 - MPMX20_02876 0.35 -1.8
3,031,608 + MPMX20_02876 0.40 -2.2
3,031,616 - MPMX20_02876 0.42 -1.4
3,031,620 + MPMX20_02876 0.42 -0.7
3,031,728 + MPMX20_02876 0.57 +0.1
3,031,740 + MPMX20_02876 0.58 -1.7
3,031,740 + MPMX20_02876 0.58 -1.3
3,031,742 + MPMX20_02876 0.58 -2.8
3,031,748 - MPMX20_02876 0.59 -1.9
3,031,899 - MPMX20_02876 0.80 -1.8
3,031,906 + MPMX20_02876 0.81 -1.2
3,031,940 - MPMX20_02876 0.85 -1.6
3,031,956 + MPMX20_02876 0.87 -1.4
3,031,956 + MPMX20_02876 0.87 -1.9
3,032,026 + -1.5
3,032,197 + MPMX20_02877 0.22 -0.3
3,032,197 - MPMX20_02877 0.22 -1.8
3,032,206 - MPMX20_02877 0.24 -1.5
3,032,233 - MPMX20_02877 0.31 -2.0
3,032,239 - MPMX20_02877 0.33 -1.5
3,032,244 - MPMX20_02877 0.34 -2.6
3,032,262 + MPMX20_02877 0.39 -1.4
3,032,279 + MPMX20_02877 0.43 -1.3
3,032,325 + MPMX20_02877 0.55 -2.0
3,032,332 + MPMX20_02877 0.57 -1.8
3,032,333 - MPMX20_02877 0.57 -1.4
3,032,357 - MPMX20_02877 0.64 -1.5
3,032,366 + MPMX20_02877 0.66 -1.5
3,032,482 + -1.4
3,032,482 + -1.5
3,032,490 - -1.5
3,032,590 - MPMX20_02878 0.21 -0.5
3,032,590 - MPMX20_02878 0.21 -1.7
3,032,592 - MPMX20_02878 0.21 -1.5
3,032,597 - MPMX20_02878 0.22 -1.5
3,032,686 + MPMX20_02878 0.42 -1.3
3,032,686 + MPMX20_02878 0.42 -1.4
3,032,720 - MPMX20_02878 0.49 -1.8
3,032,722 + MPMX20_02878 0.49 -0.5
3,032,754 + MPMX20_02878 0.56 -2.5
3,032,809 - MPMX20_02878 0.68 -1.2
3,032,809 - MPMX20_02878 0.68 -1.5
3,032,809 - MPMX20_02878 0.68 -1.4
3,032,809 - MPMX20_02878 0.68 -1.5
3,032,831 - MPMX20_02878 0.73 -1.6
3,032,831 - MPMX20_02878 0.73 -1.6
3,032,957 + -2.3
3,032,966 - -2.1
3,032,998 + MPMX20_02879 0.11 -2.4
3,033,042 + MPMX20_02879 0.23 -2.0
3,033,160 - MPMX20_02879 0.57 -2.3
3,033,210 + MPMX20_02879 0.71 -1.8
3,033,290 - -2.1
3,033,290 - -3.6
3,033,315 - -2.1
3,033,315 - -2.1
3,033,327 - -2.1
3,033,351 - -0.5
3,033,361 - -1.1
3,033,361 - -1.7
3,033,449 + MPMX20_02880 0.21 -3.8
3,033,463 + MPMX20_02880 0.23 -3.6
3,033,465 + MPMX20_02880 0.23 -2.0
3,033,465 + MPMX20_02880 0.23 -1.4
3,033,465 + MPMX20_02880 0.23 -1.6
3,033,465 + MPMX20_02880 0.23 -1.9
3,033,473 - MPMX20_02880 0.24 -2.4
3,033,473 - MPMX20_02880 0.24 -1.4
3,033,476 + MPMX20_02880 0.25 -2.9
3,033,482 + MPMX20_02880 0.26 -0.9
3,033,484 - MPMX20_02880 0.26 -2.2
3,033,484 - MPMX20_02880 0.26 -1.8
3,033,489 - MPMX20_02880 0.27 -1.2

Or see this region's nucleotide sequence