Experiment: acetate trihydrate and Sodium L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_025120 and TX73_025125 are separated by 167 nucleotides TX73_025125 and TX73_025130 are separated by 365 nucleotides
TX73_025120: TX73_025120 - peptide-methionine (S)-S-oxide reductase MsrA, at 5,456,886 to 5,457,542
_025120
TX73_025125: TX73_025125 - hypothetical protein, at 5,457,710 to 5,458,027
_025125
TX73_025130: TX73_025130 - 30S ribosomal protein S20, at 5,458,393 to 5,458,659
_025130
Position (kb) 5458
5459 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5457.396 kb on - strand, within TX73_025120 at 5457.396 kb on - strand, within TX73_025120 at 5457.398 kb on - strand, within TX73_025120 at 5457.398 kb on - strand, within TX73_025120 at 5457.400 kb on + strand, within TX73_025120 at 5457.405 kb on + strand, within TX73_025120 at 5457.405 kb on + strand, within TX73_025120 at 5457.405 kb on + strand, within TX73_025120 at 5457.408 kb on - strand, within TX73_025120 at 5457.412 kb on - strand, within TX73_025120 at 5457.413 kb on - strand, within TX73_025120 at 5457.413 kb on - strand, within TX73_025120 at 5457.420 kb on - strand, within TX73_025120 at 5457.498 kb on - strand at 5457.599 kb on + strand at 5457.610 kb on - strand at 5457.613 kb on + strand at 5457.628 kb on - strand at 5457.660 kb on + strand at 5457.666 kb on - strand at 5457.666 kb on - strand at 5457.668 kb on - strand at 5457.689 kb on + strand at 5457.697 kb on - strand at 5457.723 kb on + strand at 5457.731 kb on - strand at 5457.749 kb on + strand, within TX73_025125 at 5457.753 kb on + strand, within TX73_025125 at 5457.763 kb on + strand, within TX73_025125 at 5457.763 kb on + strand, within TX73_025125 at 5457.782 kb on - strand, within TX73_025125 at 5457.787 kb on - strand, within TX73_025125 at 5457.787 kb on - strand, within TX73_025125 at 5457.795 kb on - strand, within TX73_025125 at 5457.813 kb on + strand, within TX73_025125 at 5457.816 kb on - strand, within TX73_025125 at 5457.821 kb on - strand, within TX73_025125 at 5457.821 kb on - strand, within TX73_025125 at 5457.821 kb on - strand, within TX73_025125 at 5457.831 kb on - strand, within TX73_025125 at 5457.835 kb on - strand, within TX73_025125 at 5457.835 kb on - strand, within TX73_025125 at 5457.845 kb on + strand, within TX73_025125 at 5457.850 kb on + strand, within TX73_025125 at 5457.850 kb on + strand, within TX73_025125 at 5457.863 kb on - strand, within TX73_025125 at 5457.876 kb on + strand, within TX73_025125 at 5457.881 kb on + strand, within TX73_025125 at 5457.886 kb on + strand, within TX73_025125 at 5457.886 kb on + strand, within TX73_025125 at 5457.886 kb on + strand, within TX73_025125 at 5457.886 kb on + strand, within TX73_025125 at 5457.889 kb on - strand, within TX73_025125 at 5457.894 kb on - strand, within TX73_025125 at 5457.917 kb on + strand, within TX73_025125 at 5457.920 kb on - strand, within TX73_025125 at 5457.943 kb on - strand, within TX73_025125 at 5457.954 kb on + strand, within TX73_025125 at 5457.960 kb on - strand, within TX73_025125 at 5457.965 kb on - strand, within TX73_025125 at 5457.965 kb on - strand, within TX73_025125 at 5457.965 kb on - strand, within TX73_025125 at 5457.984 kb on + strand, within TX73_025125 at 5457.984 kb on + strand, within TX73_025125 at 5457.992 kb on - strand, within TX73_025125 at 5458.017 kb on - strand at 5458.026 kb on + strand at 5458.033 kb on - strand at 5458.034 kb on - strand at 5458.034 kb on - strand at 5458.040 kb on + strand at 5458.052 kb on + strand at 5458.063 kb on + strand at 5458.063 kb on + strand at 5458.063 kb on + strand at 5458.071 kb on - strand at 5458.071 kb on - strand at 5458.071 kb on - strand at 5458.076 kb on - strand at 5458.092 kb on + strand at 5458.098 kb on - strand at 5458.098 kb on - strand at 5458.107 kb on + strand at 5458.109 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.119 kb on + strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.127 kb on - strand at 5458.129 kb on + strand at 5458.130 kb on + strand at 5458.130 kb on + strand at 5458.130 kb on + strand at 5458.130 kb on + strand at 5458.137 kb on - strand at 5458.138 kb on - strand at 5458.138 kb on - strand at 5458.138 kb on - strand at 5458.138 kb on - strand at 5458.138 kb on - strand at 5458.138 kb on - strand at 5458.138 kb on - strand at 5458.138 kb on - strand at 5458.160 kb on + strand at 5458.363 kb on + strand at 5458.645 kb on - strand at 5458.671 kb on + strand at 5458.681 kb on + strand at 5458.681 kb on + strand at 5458.724 kb on + strand at 5458.724 kb on + strand at 5458.724 kb on + strand at 5458.737 kb on + strand at 5458.737 kb on + strand at 5458.737 kb on + strand at 5458.745 kb on - strand at 5458.774 kb on + strand at 5458.784 kb on - strand at 5458.934 kb on + strand at 5458.936 kb on + strand at 5458.971 kb on - strand at 5458.978 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.990 kb on + strand at 5458.998 kb on - strand at 5458.998 kb on - strand at 5458.998 kb on - strand at 5458.998 kb on - strand at 5458.998 kb on - strand at 5458.998 kb on - strand at 5459.037 kb on - strand at 5459.042 kb on - strand at 5459.072 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate trihydrate and Sodium L-Lactate (C) remove 5,457,396 - TX73_025120 0.78 -1.0 5,457,396 - TX73_025120 0.78 -1.6 5,457,398 - TX73_025120 0.78 +0.9 5,457,398 - TX73_025120 0.78 -0.5 5,457,400 + TX73_025120 0.78 -0.2 5,457,405 + TX73_025120 0.79 +0.5 5,457,405 + TX73_025120 0.79 -0.1 5,457,405 + TX73_025120 0.79 -0.6 5,457,408 - TX73_025120 0.79 +0.9 5,457,412 - TX73_025120 0.80 +1.9 5,457,413 - TX73_025120 0.80 -0.1 5,457,413 - TX73_025120 0.80 -0.3 5,457,420 - TX73_025120 0.81 +0.4 5,457,498 - +0.4 5,457,599 + -0.0 5,457,610 - -0.5 5,457,613 + +0.4 5,457,628 - -1.9 5,457,660 + +0.5 5,457,666 - -1.2 5,457,666 - -0.1 5,457,668 - -0.1 5,457,689 + -2.4 5,457,697 - -0.4 5,457,723 + +0.7 5,457,731 - -0.1 5,457,749 + TX73_025125 0.12 +3.3 5,457,753 + TX73_025125 0.14 -0.1 5,457,763 + TX73_025125 0.17 -0.3 5,457,763 + TX73_025125 0.17 -1.0 5,457,782 - TX73_025125 0.23 -0.4 5,457,787 - TX73_025125 0.24 +4.2 5,457,787 - TX73_025125 0.24 -1.7 5,457,795 - TX73_025125 0.27 -0.1 5,457,813 + TX73_025125 0.32 +0.3 5,457,816 - TX73_025125 0.33 +0.1 5,457,821 - TX73_025125 0.35 -0.1 5,457,821 - TX73_025125 0.35 +0.1 5,457,821 - TX73_025125 0.35 +0.5 5,457,831 - TX73_025125 0.38 +3.2 5,457,835 - TX73_025125 0.39 +2.1 5,457,835 - TX73_025125 0.39 +2.4 5,457,845 + TX73_025125 0.42 +1.9 5,457,850 + TX73_025125 0.44 +3.0 5,457,850 + TX73_025125 0.44 +0.4 5,457,863 - TX73_025125 0.48 +0.4 5,457,876 + TX73_025125 0.52 +0.1 5,457,881 + TX73_025125 0.54 +1.7 5,457,886 + TX73_025125 0.55 +3.1 5,457,886 + TX73_025125 0.55 -0.6 5,457,886 + TX73_025125 0.55 -0.3 5,457,886 + TX73_025125 0.55 +0.1 5,457,889 - TX73_025125 0.56 -0.9 5,457,894 - TX73_025125 0.58 +1.9 5,457,917 + TX73_025125 0.65 +1.4 5,457,920 - TX73_025125 0.66 -0.9 5,457,943 - TX73_025125 0.73 -1.2 5,457,954 + TX73_025125 0.77 +2.4 5,457,960 - TX73_025125 0.79 +2.1 5,457,965 - TX73_025125 0.80 +3.2 5,457,965 - TX73_025125 0.80 +0.1 5,457,965 - TX73_025125 0.80 +0.1 5,457,984 + TX73_025125 0.86 -0.9 5,457,984 + TX73_025125 0.86 +0.6 5,457,992 - TX73_025125 0.89 -0.9 5,458,017 - +1.7 5,458,026 + -1.1 5,458,033 - -0.6 5,458,034 - -0.2 5,458,034 - +0.7 5,458,040 + +0.0 5,458,052 + +1.0 5,458,063 + -0.0 5,458,063 + +0.8 5,458,063 + -1.1 5,458,071 - +1.7 5,458,071 - -1.4 5,458,071 - -0.7 5,458,076 - +0.4 5,458,092 + +0.2 5,458,098 - -0.6 5,458,098 - -0.3 5,458,107 + -0.9 5,458,109 + +0.6 5,458,119 + +0.0 5,458,119 + +2.2 5,458,119 + -0.8 5,458,119 + -0.4 5,458,119 + +0.9 5,458,119 + -0.7 5,458,119 + +1.5 5,458,119 + -0.3 5,458,119 + +1.6 5,458,119 + -1.0 5,458,119 + +0.3 5,458,127 - -2.5 5,458,127 - -1.2 5,458,127 - +0.7 5,458,127 - +0.0 5,458,127 - -0.7 5,458,127 - -1.2 5,458,127 - -1.5 5,458,127 - +0.5 5,458,127 - -3.2 5,458,127 - -0.1 5,458,127 - +0.8 5,458,127 - -1.9 5,458,127 - +0.1 5,458,127 - -1.2 5,458,127 - -1.1 5,458,127 - -1.5 5,458,129 + +0.5 5,458,130 + -1.3 5,458,130 + -1.3 5,458,130 + -3.3 5,458,130 + -1.1 5,458,137 - -1.5 5,458,138 - -1.7 5,458,138 - +0.1 5,458,138 - -0.9 5,458,138 - -0.8 5,458,138 - +0.1 5,458,138 - +1.2 5,458,138 - -0.8 5,458,138 - -0.3 5,458,160 + +0.4 5,458,363 + +0.6 5,458,645 - -1.3 5,458,671 + +0.3 5,458,681 + +0.6 5,458,681 + +0.0 5,458,724 + -0.3 5,458,724 + +0.7 5,458,724 + +1.2 5,458,737 + -0.0 5,458,737 + -0.5 5,458,737 + -1.1 5,458,745 - +0.5 5,458,774 + +0.4 5,458,784 - -1.7 5,458,934 + -0.8 5,458,936 + +0.4 5,458,971 - +0.7 5,458,978 + +0.6 5,458,990 + +0.5 5,458,990 + +1.4 5,458,990 + -1.0 5,458,990 + +0.4 5,458,990 + -3.1 5,458,990 + -2.0 5,458,990 + +0.3 5,458,990 + -2.0 5,458,990 + -0.4 5,458,990 + +0.2 5,458,998 - -0.8 5,458,998 - -2.4 5,458,998 - +0.0 5,458,998 - -0.3 5,458,998 - -0.2 5,458,998 - +0.6 5,459,037 - -0.4 5,459,042 - +0.6 5,459,072 + +0.9
Or see this region's nucleotide sequence