Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_023385

Experiment: acetate trihydrate and Sodium L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate trihydrate and Sodium L-Lactate (C)
5,080,867	-		TX73_023375	0.55	+1.2
5,080,871	+		TX73_023375	0.56	+1.4
5,080,884	-		TX73_023375	0.58	-1.6
5,080,914	+		TX73_023375	0.62	-1.4
5,080,927	-		TX73_023375	0.64	+1.3
5,080,945	-		TX73_023375	0.66	-1.8
5,080,959	-		TX73_023375	0.68	-2.1
5,080,984	+		TX73_023375	0.72	+0.9
5,080,989	+		TX73_023375	0.73	+0.4
5,080,992	-		TX73_023375	0.73	+0.0
5,080,992	-		TX73_023375	0.73	-0.1
5,080,992	-		TX73_023375	0.73	-2.4
5,081,010	+		TX73_023375	0.76	-0.4
5,081,010	+		TX73_023375	0.76	-1.9
5,081,018	-		TX73_023375	0.77	-1.9
5,081,077	-		TX73_023375	0.86	+1.7
5,081,077	-		TX73_023375	0.86	+0.9
5,081,083	-		TX73_023375	0.86	+0.0
5,081,136	+				+2.1
5,081,136	+				-2.7
5,081,136	+				+0.4
5,081,144	-				-2.7
5,081,144	-				+2.2
5,081,179	-				-0.5
5,081,208	+				-1.2
5,081,226	+				-2.6
5,081,227	+				+1.1
5,081,235	-				+0.2
5,081,406	+				-1.8
5,081,406	+				+4.1
5,081,406	+				-2.4
5,081,415	-				-0.2
5,081,417	+				+1.2
5,081,428	+				+0.8
5,081,473	-		TX73_023380	0.25	-2.3
5,081,480	-		TX73_023380	0.27	+1.5
5,081,480	-		TX73_023380	0.27	-0.5
5,081,480	-		TX73_023380	0.27	-0.9
5,081,487	+		TX73_023380	0.30	-1.3
5,081,496	+		TX73_023380	0.33	+1.5
5,081,497	+		TX73_023380	0.34	-1.8
5,081,497	+		TX73_023380	0.34	+3.5
5,081,504	-		TX73_023380	0.36	+0.6
5,081,532	+		TX73_023380	0.47	+0.5
5,081,545	-		TX73_023380	0.52	-0.3
5,081,557	-		TX73_023380	0.57	+0.5
5,081,567	-		TX73_023380	0.61	+0.4
5,081,572	+		TX73_023380	0.62	+1.6
5,081,572	+		TX73_023380	0.62	+0.6
5,081,572	+		TX73_023380	0.62	+0.1
5,081,580	+		TX73_023380	0.66	-0.9
5,081,608	+		TX73_023380	0.76	-0.9
5,081,618	+		TX73_023380	0.80	-2.5
5,081,626	-		TX73_023380	0.83	-1.3
5,081,629	+		TX73_023380	0.84	-1.3
5,081,629	+		TX73_023380	0.84	-1.3
5,081,639	+		TX73_023380	0.88	+0.1
5,081,667	+				-1.9
5,081,675	-				+0.3
5,081,685	-				-0.7
5,081,704	+				-0.5
5,081,800	+				+1.1
5,081,820	+				-0.6
5,081,820	+				+0.8
5,081,828	-				+1.0
5,081,828	-				+0.6
5,081,851	+				+3.6
5,081,858	-				+1.7
5,081,868	-				-0.2
5,081,956	+				-0.9
5,081,962	+				-0.2
5,081,970	-				-0.4
5,082,032	+				-3.8
5,082,040	-		TX73_023385	0.10	+0.4
5,082,097	+		TX73_023385	0.13	-0.5
5,082,097	+		TX73_023385	0.13	-0.2
5,082,113	-		TX73_023385	0.14	+0.7
5,082,136	-		TX73_023385	0.15	-0.6
5,082,146	+		TX73_023385	0.16	+1.1
5,082,149	-		TX73_023385	0.16	-2.6
5,082,198	-		TX73_023385	0.18	-1.6
5,082,217	-		TX73_023385	0.19	-3.0
5,082,225	-		TX73_023385	0.20	+1.8
5,082,240	+		TX73_023385	0.21	+4.7
5,082,302	+		TX73_023385	0.24	+1.1
5,082,303	-		TX73_023385	0.24	+0.1
5,082,347	+		TX73_023385	0.26	-0.4
5,082,355	-		TX73_023385	0.27	-1.3
5,082,470	-		TX73_023385	0.33	-2.3
5,082,503	+		TX73_023385	0.34	+0.3
5,082,505	-		TX73_023385	0.34	+1.7
5,082,513	+		TX73_023385	0.35	-2.7
5,082,513	+		TX73_023385	0.35	-2.9
5,082,513	+		TX73_023385	0.35	+1.0
5,082,521	-		TX73_023385	0.35	-0.3
5,082,521	-		TX73_023385	0.35	+0.2
5,082,521	-		TX73_023385	0.35	+1.7
5,082,602	+		TX73_023385	0.39	-0.4
5,082,614	-		TX73_023385	0.40	+0.2
5,082,646	-		TX73_023385	0.42	-0.2
5,082,786	+		TX73_023385	0.49	+1.8
5,082,794	-		TX73_023385	0.50	-2.7
5,082,802	-		TX73_023385	0.50	-0.1
5,082,846	-		TX73_023385	0.52	+0.9
5,082,848	+		TX73_023385	0.52	+1.5
5,082,861	+		TX73_023385	0.53	+2.7
5,082,865	-		TX73_023385	0.53	+2.0
5,082,893	+		TX73_023385	0.55	-0.4
5,082,923	+		TX73_023385	0.56	-1.5
5,082,981	-		TX73_023385	0.59	-0.5
5,082,986	+		TX73_023385	0.60	-1.3
5,083,025	-		TX73_023385	0.62	-1.1
5,083,135	+		TX73_023385	0.67	-1.8
5,083,160	+		TX73_023385	0.69	-2.4
5,083,271	+		TX73_023385	0.74	-2.9
5,083,303	-		TX73_023385	0.76	-4.2
5,083,310	-		TX73_023385	0.77	-1.8
5,083,324	-		TX73_023385	0.77	-2.0
5,083,328	+		TX73_023385	0.77	+1.0
5,083,352	+		TX73_023385	0.79	+1.9
5,083,365	-		TX73_023385	0.79	-1.5
5,083,385	-		TX73_023385	0.80	-1.1
5,083,486	-		TX73_023385	0.86	-2.1
5,083,536	+		TX73_023385	0.88	+0.5
5,083,628	-				+0.6
5,083,665	-				+0.5
5,083,717	+				-1.6
5,083,717	+				+2.5
5,083,717	+				+2.3
5,083,725	-				+1.7
5,083,725	-				+9.7
5,083,730	+				-1.1
5,083,752	-				+1.6
5,083,770	+				+3.3
5,083,770	+				-2.1
5,083,786	-				+0.2
5,083,814	-				-1.7
5,083,819	+				+0.0
5,083,840	-				+0.4
5,083,857	+				+2.2
5,083,862	+				+1.7
5,083,867	+				+0.8
5,083,876	+				+0.6
5,083,925	+				+1.1
5,083,960	-				-1.0
5,083,973	+				-2.8
5,084,020	+		TX73_023390	0.11	+1.0
5,084,053	-		TX73_023390	0.15	+0.2
5,084,072	+		TX73_023390	0.18	-0.9
5,084,082	+		TX73_023390	0.19	-2.3
5,084,090	-		TX73_023390	0.20	-1.6
5,084,107	+		TX73_023390	0.22	+0.7
5,084,118	-		TX73_023390	0.24	-4.3
5,084,159	-		TX73_023390	0.29	+1.0
5,084,164	-		TX73_023390	0.30	-2.8
5,084,177	+		TX73_023390	0.32	-3.5
5,084,177	+		TX73_023390	0.32	+0.8
5,084,185	-		TX73_023390	0.33	-2.1
5,084,185	-		TX73_023390	0.33	-0.1
5,084,186	-		TX73_023390	0.33	-2.9
5,084,226	+		TX73_023390	0.38	-2.1
5,084,231	+		TX73_023390	0.39	+1.2
5,084,294	+		TX73_023390	0.48	+0.4
5,084,302	-		TX73_023390	0.49	+1.3
5,084,331	+		TX73_023390	0.52	+0.2
5,084,338	-		TX73_023390	0.53	+0.1
5,084,356	+		TX73_023390	0.56	+2.7
5,084,364	-		TX73_023390	0.57	-0.8
5,084,396	+		TX73_023390	0.61	+0.4
5,084,399	-		TX73_023390	0.62	+1.3
5,084,414	+		TX73_023390	0.64	+1.0
5,084,440	+		TX73_023390	0.67	+0.0
5,084,454	+		TX73_023390	0.69	+2.2
5,084,476	+		TX73_023390	0.72	-0.2
5,084,483	+		TX73_023390	0.73	+1.4
5,084,528	+		TX73_023390	0.79	-3.5
5,084,528	+		TX73_023390	0.79	-2.1
5,084,533	+		TX73_023390	0.80	+0.2
5,084,536	-		TX73_023390	0.80	+0.9
5,084,536	-		TX73_023390	0.80	+0.7
5,084,538	+		TX73_023390	0.80	-2.2
5,084,538	+		TX73_023390	0.80	+0.7
5,084,538	+		TX73_023390	0.80	-0.1
5,084,546	-		TX73_023390	0.81	-1.4
5,084,573	+		TX73_023390	0.85	-0.8
5,084,678	-				-1.6
5,084,700	-				+1.0
5,084,745	+				-0.4
5,084,745	+				+1.1
5,084,753	-				+0.9