Experiment: acetate trihydrate and Sodium L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_003325 and TX73_003330 overlap by 1 nucleotides TX73_003330 and TX73_003335 are separated by 95 nucleotides TX73_003335 and TX73_003340 are separated by 377 nucleotides
TX73_003325: TX73_003325 - flagellar filament capping protein FliD, at 709,544 to 711,259
_003325
TX73_003330: TX73_003330 - flagellar protein FliS, at 711,259 to 711,651
_003330
TX73_003335: TX73_003335 - hypothetical protein, at 711,747 to 712,046
_003335
TX73_003340: TX73_003340 - FlgD immunoglobulin-like domain containing protein, at 712,424 to 713,092
_003340
Position (kb) 711
712
713 Strain fitness (log2 ratio) -2
-1
0
1
2 at 710.837 kb on - strand, within TX73_003325 at 710.858 kb on + strand, within TX73_003325 at 710.866 kb on - strand, within TX73_003325 at 710.868 kb on + strand, within TX73_003325 at 710.962 kb on - strand, within TX73_003325 at 710.962 kb on - strand, within TX73_003325 at 710.968 kb on - strand, within TX73_003325 at 710.991 kb on + strand, within TX73_003325 at 711.230 kb on + strand at 711.327 kb on + strand, within TX73_003330 at 711.428 kb on - strand, within TX73_003330 at 711.432 kb on - strand, within TX73_003330 at 711.463 kb on - strand, within TX73_003330 at 711.504 kb on + strand, within TX73_003330 at 711.554 kb on - strand, within TX73_003330 at 711.614 kb on + strand at 711.624 kb on - strand at 711.738 kb on - strand at 711.745 kb on + strand at 711.745 kb on + strand at 711.745 kb on + strand at 711.753 kb on - strand at 711.768 kb on + strand at 711.826 kb on - strand, within TX73_003335 at 711.874 kb on - strand, within TX73_003335 at 711.878 kb on + strand, within TX73_003335 at 711.881 kb on - strand, within TX73_003335 at 711.987 kb on - strand, within TX73_003335 at 712.017 kb on + strand at 712.086 kb on + strand at 712.292 kb on + strand at 712.337 kb on - strand at 712.385 kb on + strand at 712.473 kb on - strand at 712.796 kb on - strand, within TX73_003340 at 712.855 kb on - strand, within TX73_003340 at 712.922 kb on + strand, within TX73_003340 at 712.922 kb on + strand, within TX73_003340 at 712.934 kb on + strand, within TX73_003340 at 712.982 kb on - strand, within TX73_003340 at 713.015 kb on + strand, within TX73_003340 at 713.036 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate trihydrate and Sodium L-Lactate (C) remove 710,837 - TX73_003325 0.75 +0.7 710,858 + TX73_003325 0.77 +1.2 710,866 - TX73_003325 0.77 -1.0 710,868 + TX73_003325 0.77 -0.9 710,962 - TX73_003325 0.83 +1.0 710,962 - TX73_003325 0.83 -0.8 710,968 - TX73_003325 0.83 +1.0 710,991 + TX73_003325 0.84 +0.2 711,230 + +0.6 711,327 + TX73_003330 0.17 +0.8 711,428 - TX73_003330 0.43 +0.3 711,432 - TX73_003330 0.44 +1.5 711,463 - TX73_003330 0.52 +1.9 711,504 + TX73_003330 0.62 -2.1 711,554 - TX73_003330 0.75 +0.8 711,614 + +0.2 711,624 - +1.0 711,738 - +0.9 711,745 + +0.1 711,745 + +1.5 711,745 + -0.1 711,753 - +0.7 711,768 + -1.4 711,826 - TX73_003335 0.26 -1.7 711,874 - TX73_003335 0.42 -0.2 711,878 + TX73_003335 0.44 -1.2 711,881 - TX73_003335 0.45 -1.0 711,987 - TX73_003335 0.80 -0.3 712,017 + -1.0 712,086 + -0.7 712,292 + +2.5 712,337 - +0.1 712,385 + +1.7 712,473 - +2.3 712,796 - TX73_003340 0.56 -1.7 712,855 - TX73_003340 0.64 -1.8 712,922 + TX73_003340 0.74 -0.2 712,922 + TX73_003340 0.74 -0.4 712,934 + TX73_003340 0.76 -2.2 712,982 - TX73_003340 0.83 -0.8 713,015 + TX73_003340 0.88 -0.3 713,036 - +1.3
Or see this region's nucleotide sequence