Experiment: acetate trihydrate and Sodium L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_002070 and TX73_002075 are separated by 127 nucleotides TX73_002075 and TX73_002080 are separated by 200 nucleotides
TX73_002070: TX73_002070 - SDR family oxidoreductase, at 437,160 to 437,996
_002070
TX73_002075: TX73_002075 - IS481-like element ISRpa3 family transposase, at 438,124 to 439,293
_002075
TX73_002080: TX73_002080 - NADPH:quinone oxidoreductase family protein, at 439,494 to 440,468
_002080
Position (kb) 438
439
440 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 437.124 kb on + strand at 437.124 kb on + strand at 437.127 kb on - strand at 437.181 kb on - strand at 437.191 kb on + strand at 437.191 kb on + strand at 437.194 kb on - strand at 437.199 kb on - strand at 437.199 kb on - strand at 437.199 kb on - strand at 437.199 kb on - strand at 437.214 kb on - strand at 437.228 kb on + strand at 437.228 kb on - strand at 437.246 kb on - strand, within TX73_002070 at 437.251 kb on + strand, within TX73_002070 at 437.251 kb on - strand, within TX73_002070 at 437.251 kb on - strand, within TX73_002070 at 437.264 kb on - strand, within TX73_002070 at 437.284 kb on + strand, within TX73_002070 at 437.294 kb on + strand, within TX73_002070 at 437.294 kb on + strand, within TX73_002070 at 437.309 kb on - strand, within TX73_002070 at 437.313 kb on + strand, within TX73_002070 at 437.342 kb on + strand, within TX73_002070 at 437.362 kb on - strand, within TX73_002070 at 437.392 kb on + strand, within TX73_002070 at 437.392 kb on + strand, within TX73_002070 at 437.400 kb on - strand, within TX73_002070 at 437.400 kb on - strand, within TX73_002070 at 437.400 kb on - strand, within TX73_002070 at 437.465 kb on + strand, within TX73_002070 at 437.477 kb on - strand, within TX73_002070 at 437.484 kb on + strand, within TX73_002070 at 437.504 kb on - strand, within TX73_002070 at 437.509 kb on + strand, within TX73_002070 at 437.522 kb on - strand, within TX73_002070 at 437.527 kb on - strand, within TX73_002070 at 437.538 kb on + strand, within TX73_002070 at 437.539 kb on - strand, within TX73_002070 at 437.539 kb on - strand, within TX73_002070 at 437.569 kb on + strand, within TX73_002070 at 437.572 kb on - strand, within TX73_002070 at 437.572 kb on - strand, within TX73_002070 at 437.579 kb on - strand, within TX73_002070 at 437.583 kb on + strand, within TX73_002070 at 437.610 kb on - strand, within TX73_002070 at 437.610 kb on - strand, within TX73_002070 at 437.624 kb on + strand, within TX73_002070 at 437.626 kb on + strand, within TX73_002070 at 437.626 kb on + strand, within TX73_002070 at 437.633 kb on + strand, within TX73_002070 at 437.633 kb on + strand, within TX73_002070 at 437.633 kb on + strand, within TX73_002070 at 437.633 kb on + strand, within TX73_002070 at 437.633 kb on + strand, within TX73_002070 at 437.633 kb on + strand, within TX73_002070 at 437.641 kb on - strand, within TX73_002070 at 437.641 kb on - strand, within TX73_002070 at 437.641 kb on - strand, within TX73_002070 at 437.641 kb on - strand, within TX73_002070 at 437.641 kb on - strand, within TX73_002070 at 437.651 kb on - strand, within TX73_002070 at 437.651 kb on - strand, within TX73_002070 at 437.707 kb on - strand, within TX73_002070 at 437.722 kb on + strand, within TX73_002070 at 437.724 kb on + strand, within TX73_002070 at 437.729 kb on + strand, within TX73_002070 at 437.729 kb on + strand, within TX73_002070 at 437.760 kb on - strand, within TX73_002070 at 437.760 kb on - strand, within TX73_002070 at 437.812 kb on + strand, within TX73_002070 at 437.821 kb on + strand, within TX73_002070 at 437.853 kb on + strand, within TX73_002070 at 437.893 kb on - strand, within TX73_002070 at 437.903 kb on + strand, within TX73_002070 at 437.936 kb on + strand at 437.944 kb on - strand at 437.955 kb on + strand at 437.981 kb on + strand at 437.994 kb on - strand at 438.013 kb on - strand at 438.045 kb on - strand at 438.082 kb on + strand at 438.130 kb on - strand at 438.158 kb on - strand at 438.170 kb on - strand at 438.181 kb on + strand at 438.207 kb on - strand at 438.239 kb on + strand at 438.390 kb on - strand, within TX73_002075 at 438.449 kb on - strand, within TX73_002075 at 438.458 kb on + strand, within TX73_002075 at 438.468 kb on - strand, within TX73_002075 at 438.492 kb on - strand, within TX73_002075 at 438.742 kb on + strand, within TX73_002075 at 438.742 kb on + strand, within TX73_002075 at 438.775 kb on + strand, within TX73_002075 at 438.775 kb on + strand, within TX73_002075 at 438.778 kb on - strand, within TX73_002075 at 438.839 kb on + strand, within TX73_002075 at 438.861 kb on - strand, within TX73_002075 at 438.882 kb on - strand, within TX73_002075 at 438.907 kb on - strand, within TX73_002075 at 438.926 kb on - strand, within TX73_002075 at 438.967 kb on + strand, within TX73_002075 at 438.975 kb on - strand, within TX73_002075 at 439.003 kb on + strand, within TX73_002075 at 439.079 kb on - strand, within TX73_002075 at 439.164 kb on - strand, within TX73_002075 at 439.223 kb on + strand at 439.232 kb on - strand at 439.258 kb on + strand at 439.266 kb on - strand at 439.286 kb on - strand at 439.297 kb on - strand at 439.297 kb on - strand at 439.324 kb on + strand at 439.327 kb on + strand at 439.354 kb on + strand at 439.354 kb on + strand at 439.354 kb on + strand at 439.360 kb on + strand at 439.362 kb on - strand at 439.362 kb on - strand at 439.362 kb on - strand at 439.372 kb on + strand at 439.380 kb on + strand at 439.662 kb on + strand, within TX73_002080 at 439.735 kb on - strand, within TX73_002080 at 439.760 kb on - strand, within TX73_002080 at 439.870 kb on - strand, within TX73_002080 at 439.938 kb on + strand, within TX73_002080 at 439.940 kb on + strand, within TX73_002080 at 439.941 kb on - strand, within TX73_002080 at 439.993 kb on - strand, within TX73_002080 at 440.102 kb on + strand, within TX73_002080 at 440.221 kb on + strand, within TX73_002080 at 440.242 kb on + strand, within TX73_002080 at 440.252 kb on + strand, within TX73_002080 at 440.285 kb on - strand, within TX73_002080 at 440.287 kb on - strand, within TX73_002080 at 440.287 kb on - strand, within TX73_002080 at 440.287 kb on - strand, within TX73_002080 at 440.287 kb on - strand, within TX73_002080
Per-strain Table
Position Strand Gene LocusTag Fraction acetate trihydrate and Sodium L-Lactate (C) remove 437,124 + -0.2 437,124 + +0.3 437,127 - -1.0 437,181 - -0.2 437,191 + -1.4 437,191 + +0.5 437,194 - -0.5 437,199 - -1.2 437,199 - +1.6 437,199 - -1.6 437,199 - -1.9 437,214 - +0.5 437,228 + +0.6 437,228 - -0.3 437,246 - TX73_002070 0.10 +0.7 437,251 + TX73_002070 0.11 -1.5 437,251 - TX73_002070 0.11 +0.5 437,251 - TX73_002070 0.11 +0.5 437,264 - TX73_002070 0.12 +1.4 437,284 + TX73_002070 0.15 -0.5 437,294 + TX73_002070 0.16 +0.2 437,294 + TX73_002070 0.16 -1.3 437,309 - TX73_002070 0.18 -3.6 437,313 + TX73_002070 0.18 -0.9 437,342 + TX73_002070 0.22 -1.9 437,362 - TX73_002070 0.24 +0.1 437,392 + TX73_002070 0.28 -0.2 437,392 + TX73_002070 0.28 -1.0 437,400 - TX73_002070 0.29 -0.4 437,400 - TX73_002070 0.29 -0.4 437,400 - TX73_002070 0.29 -2.0 437,465 + TX73_002070 0.36 -1.3 437,477 - TX73_002070 0.38 +0.6 437,484 + TX73_002070 0.39 -0.2 437,504 - TX73_002070 0.41 -0.3 437,509 + TX73_002070 0.42 -2.0 437,522 - TX73_002070 0.43 -2.3 437,527 - TX73_002070 0.44 -0.5 437,538 + TX73_002070 0.45 +0.1 437,539 - TX73_002070 0.45 -1.1 437,539 - TX73_002070 0.45 -1.4 437,569 + TX73_002070 0.49 +0.6 437,572 - TX73_002070 0.49 +1.0 437,572 - TX73_002070 0.49 -3.1 437,579 - TX73_002070 0.50 -2.3 437,583 + TX73_002070 0.51 -3.1 437,610 - TX73_002070 0.54 -2.2 437,610 - TX73_002070 0.54 -0.6 437,624 + TX73_002070 0.55 +0.2 437,626 + TX73_002070 0.56 +1.3 437,626 + TX73_002070 0.56 -1.2 437,633 + TX73_002070 0.57 +1.6 437,633 + TX73_002070 0.57 +0.0 437,633 + TX73_002070 0.57 +1.3 437,633 + TX73_002070 0.57 +0.4 437,633 + TX73_002070 0.57 -0.2 437,633 + TX73_002070 0.57 -3.2 437,641 - TX73_002070 0.57 -0.3 437,641 - TX73_002070 0.57 +1.8 437,641 - TX73_002070 0.57 -0.7 437,641 - TX73_002070 0.57 -1.4 437,641 - TX73_002070 0.57 +0.5 437,651 - TX73_002070 0.59 +0.8 437,651 - TX73_002070 0.59 -1.4 437,707 - TX73_002070 0.65 +1.2 437,722 + TX73_002070 0.67 -0.2 437,724 + TX73_002070 0.67 +0.6 437,729 + TX73_002070 0.68 +0.7 437,729 + TX73_002070 0.68 -1.1 437,760 - TX73_002070 0.72 -0.1 437,760 - TX73_002070 0.72 -0.4 437,812 + TX73_002070 0.78 -1.5 437,821 + TX73_002070 0.79 -1.6 437,853 + TX73_002070 0.83 +0.4 437,893 - TX73_002070 0.88 -0.6 437,903 + TX73_002070 0.89 +0.4 437,936 + -0.1 437,944 - +1.0 437,955 + +0.2 437,981 + +0.7 437,994 - +0.7 438,013 - +0.8 438,045 - +0.1 438,082 + -2.2 438,130 - +1.7 438,158 - +0.3 438,170 - +0.9 438,181 + +0.7 438,207 - +0.9 438,239 + -0.5 438,390 - TX73_002075 0.23 +0.9 438,449 - TX73_002075 0.28 +1.2 438,458 + TX73_002075 0.29 -0.1 438,468 - TX73_002075 0.29 -0.1 438,492 - TX73_002075 0.31 -0.9 438,742 + TX73_002075 0.53 +0.6 438,742 + TX73_002075 0.53 +0.8 438,775 + TX73_002075 0.56 +0.1 438,775 + TX73_002075 0.56 -1.0 438,778 - TX73_002075 0.56 +0.5 438,839 + TX73_002075 0.61 +0.9 438,861 - TX73_002075 0.63 +0.4 438,882 - TX73_002075 0.65 -1.0 438,907 - TX73_002075 0.67 -0.1 438,926 - TX73_002075 0.69 +0.8 438,967 + TX73_002075 0.72 +0.7 438,975 - TX73_002075 0.73 +1.1 439,003 + TX73_002075 0.75 +1.9 439,079 - TX73_002075 0.82 +1.3 439,164 - TX73_002075 0.89 -0.0 439,223 + -0.6 439,232 - -0.8 439,258 + +0.8 439,266 - +0.8 439,286 - +1.8 439,297 - -1.2 439,297 - +1.6 439,324 + -1.3 439,327 + +1.4 439,354 + -0.8 439,354 + -0.8 439,354 + +1.1 439,360 + -0.9 439,362 - -2.1 439,362 - -1.6 439,362 - +0.6 439,372 + -1.7 439,380 + +0.6 439,662 + TX73_002080 0.17 -0.1 439,735 - TX73_002080 0.25 -1.6 439,760 - TX73_002080 0.27 -1.8 439,870 - TX73_002080 0.39 -0.2 439,938 + TX73_002080 0.46 -0.4 439,940 + TX73_002080 0.46 -0.2 439,941 - TX73_002080 0.46 -0.2 439,993 - TX73_002080 0.51 -2.1 440,102 + TX73_002080 0.62 +0.9 440,221 + TX73_002080 0.75 -0.3 440,242 + TX73_002080 0.77 +0.0 440,252 + TX73_002080 0.78 +1.3 440,285 - TX73_002080 0.81 +1.9 440,287 - TX73_002080 0.81 -1.7 440,287 - TX73_002080 0.81 -1.1 440,287 - TX73_002080 0.81 +0.5 440,287 - TX73_002080 0.81 -0.4
Or see this region's nucleotide sequence