Experiment: LB agar plate coculture with Mixed culture; Bacillus zanthoxyli TBS_046 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01773 and MPMX20_01774 are separated by 154 nucleotides MPMX20_01774 and MPMX20_01775 are separated by 89 nucleotides MPMX20_01775 and MPMX20_01776 are separated by 121 nucleotides MPMX20_01776 and MPMX20_01777 are separated by 2 nucleotides
MPMX20_01773: MPMX20_01773 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 1,865,795 to 1,866,529
_01773
MPMX20_01774: MPMX20_01774 - Acyl carrier protein, at 1,866,684 to 1,866,920
_01774
MPMX20_01775: MPMX20_01775 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 1,867,010 to 1,868,251
_01775
MPMX20_01776: MPMX20_01776 - Aminodeoxychorismate lyase, at 1,868,373 to 1,869,182
_01776
MPMX20_01777: MPMX20_01777 - Endolytic murein transglycosylase, at 1,869,185 to 1,870,207
_01777
Position (kb)
1867
1868
1869 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1867.031 kb on - strand at 1867.031 kb on - strand at 1867.118 kb on - strand at 1867.213 kb on + strand, within MPMX20_01775 at 1867.221 kb on - strand, within MPMX20_01775 at 1867.280 kb on - strand, within MPMX20_01775 at 1867.349 kb on - strand, within MPMX20_01775 at 1867.365 kb on + strand, within MPMX20_01775 at 1867.370 kb on + strand, within MPMX20_01775 at 1867.371 kb on - strand, within MPMX20_01775 at 1867.503 kb on + strand, within MPMX20_01775 at 1867.503 kb on + strand, within MPMX20_01775 at 1867.623 kb on - strand, within MPMX20_01775 at 1867.713 kb on - strand, within MPMX20_01775 at 1867.736 kb on - strand, within MPMX20_01775 at 1867.773 kb on + strand, within MPMX20_01775 at 1867.813 kb on + strand, within MPMX20_01775 at 1867.869 kb on - strand, within MPMX20_01775 at 1867.917 kb on - strand, within MPMX20_01775 at 1867.929 kb on - strand, within MPMX20_01775 at 1867.964 kb on + strand, within MPMX20_01775 at 1868.067 kb on + strand, within MPMX20_01775 at 1868.075 kb on - strand, within MPMX20_01775 at 1868.075 kb on - strand, within MPMX20_01775 at 1868.094 kb on - strand, within MPMX20_01775 at 1868.134 kb on - strand at 1868.146 kb on - strand at 1868.175 kb on + strand at 1868.175 kb on + strand at 1868.183 kb on + strand at 1868.183 kb on + strand at 1868.184 kb on + strand at 1868.185 kb on + strand at 1868.192 kb on - strand at 1868.194 kb on + strand at 1868.250 kb on + strand at 1868.315 kb on - strand at 1868.352 kb on - strand at 1868.354 kb on - strand at 1868.389 kb on + strand at 1868.389 kb on + strand at 1868.420 kb on - strand at 1868.420 kb on - strand at 1868.455 kb on - strand, within MPMX20_01776 at 1868.511 kb on + strand, within MPMX20_01776 at 1868.514 kb on - strand, within MPMX20_01776 at 1868.688 kb on - strand, within MPMX20_01776 at 1868.719 kb on + strand, within MPMX20_01776 at 1868.719 kb on + strand, within MPMX20_01776 at 1868.719 kb on + strand, within MPMX20_01776 at 1868.727 kb on - strand, within MPMX20_01776 at 1868.727 kb on - strand, within MPMX20_01776 at 1868.771 kb on + strand, within MPMX20_01776 at 1868.793 kb on + strand, within MPMX20_01776 at 1868.793 kb on - strand, within MPMX20_01776 at 1868.803 kb on + strand, within MPMX20_01776 at 1868.803 kb on + strand, within MPMX20_01776 at 1868.803 kb on + strand, within MPMX20_01776 at 1869.009 kb on + strand, within MPMX20_01776 at 1869.058 kb on - strand, within MPMX20_01776 at 1869.114 kb on + strand at 1869.122 kb on - strand at 1869.168 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB agar plate coculture with Mixed culture; Bacillus zanthoxyli TBS_046 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct remove 1,867,031 - -1.1 1,867,031 - +0.0 1,867,118 - +0.5 1,867,213 + MPMX20_01775 0.16 -2.4 1,867,221 - MPMX20_01775 0.17 -0.6 1,867,280 - MPMX20_01775 0.22 -3.4 1,867,349 - MPMX20_01775 0.27 +0.9 1,867,365 + MPMX20_01775 0.29 -1.0 1,867,370 + MPMX20_01775 0.29 -1.0 1,867,371 - MPMX20_01775 0.29 -0.7 1,867,503 + MPMX20_01775 0.40 -2.1 1,867,503 + MPMX20_01775 0.40 -0.3 1,867,623 - MPMX20_01775 0.49 -0.7 1,867,713 - MPMX20_01775 0.57 -1.7 1,867,736 - MPMX20_01775 0.58 -0.4 1,867,773 + MPMX20_01775 0.61 -1.2 1,867,813 + MPMX20_01775 0.65 -0.4 1,867,869 - MPMX20_01775 0.69 -2.5 1,867,917 - MPMX20_01775 0.73 +1.1 1,867,929 - MPMX20_01775 0.74 +1.2 1,867,964 + MPMX20_01775 0.77 -2.3 1,868,067 + MPMX20_01775 0.85 -0.5 1,868,075 - MPMX20_01775 0.86 -0.9 1,868,075 - MPMX20_01775 0.86 -1.3 1,868,094 - MPMX20_01775 0.87 -2.2 1,868,134 - -0.2 1,868,146 - -2.4 1,868,175 + -0.9 1,868,175 + -1.0 1,868,183 + -1.7 1,868,183 + -3.4 1,868,184 + -0.0 1,868,185 + -1.4 1,868,192 - +0.5 1,868,194 + -0.7 1,868,250 + +0.1 1,868,315 - +0.4 1,868,352 - +1.2 1,868,354 - +0.2 1,868,389 + -0.3 1,868,389 + +0.9 1,868,420 - -0.5 1,868,420 - -0.6 1,868,455 - MPMX20_01776 0.10 -0.0 1,868,511 + MPMX20_01776 0.17 +1.1 1,868,514 - MPMX20_01776 0.17 +0.2 1,868,688 - MPMX20_01776 0.39 +0.0 1,868,719 + MPMX20_01776 0.43 +0.1 1,868,719 + MPMX20_01776 0.43 +0.1 1,868,719 + MPMX20_01776 0.43 +0.5 1,868,727 - MPMX20_01776 0.44 +0.1 1,868,727 - MPMX20_01776 0.44 +2.1 1,868,771 + MPMX20_01776 0.49 +1.7 1,868,793 + MPMX20_01776 0.52 +0.0 1,868,793 - MPMX20_01776 0.52 +0.1 1,868,803 + MPMX20_01776 0.53 +0.2 1,868,803 + MPMX20_01776 0.53 -0.3 1,868,803 + MPMX20_01776 0.53 -0.1 1,869,009 + MPMX20_01776 0.79 +0.6 1,869,058 - MPMX20_01776 0.85 -0.1 1,869,114 + -0.1 1,869,122 - -1.5 1,869,168 + -0.1
Or see this region's nucleotide sequence