Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03309

Experiment: LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03308 and MPMX20_03309 are separated by 317 nucleotidesMPMX20_03309 and MPMX20_03310 are separated by 44 nucleotides MPMX20_03308: MPMX20_03308 - Cysteine synthase A, at 3,477,164 to 3,478,135 _03308 MPMX20_03309: MPMX20_03309 - Phosphocarrier protein HPr, at 3,478,453 to 3,478,710 _03309 MPMX20_03310: MPMX20_03310 - Phosphoenolpyruvate-protein phosphotransferase, at 3,478,755 to 3,480,482 _03310 Position (kb) 3478 3479Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3477.518 kb on + strand, within MPMX20_03308at 3477.628 kb on + strand, within MPMX20_03308at 3477.699 kb on + strand, within MPMX20_03308at 3477.699 kb on + strand, within MPMX20_03308at 3477.704 kb on + strand, within MPMX20_03308at 3477.712 kb on - strand, within MPMX20_03308at 3477.760 kb on - strand, within MPMX20_03308at 3477.781 kb on - strand, within MPMX20_03308at 3477.796 kb on - strand, within MPMX20_03308at 3477.820 kb on + strand, within MPMX20_03308at 3477.828 kb on - strand, within MPMX20_03308at 3477.876 kb on + strand, within MPMX20_03308at 3477.902 kb on + strand, within MPMX20_03308at 3477.947 kb on - strand, within MPMX20_03308at 3478.077 kb on - strandat 3478.089 kb on + strandat 3478.130 kb on + strandat 3478.221 kb on + strandat 3478.404 kb on + strandat 3478.412 kb on - strandat 3478.489 kb on + strand, within MPMX20_03309at 3478.490 kb on + strand, within MPMX20_03309at 3478.607 kb on + strand, within MPMX20_03309at 3478.615 kb on - strand, within MPMX20_03309at 3478.615 kb on - strand, within MPMX20_03309at 3478.623 kb on + strand, within MPMX20_03309at 3478.651 kb on + strand, within MPMX20_03309at 3478.675 kb on - strand, within MPMX20_03309at 3478.744 kb on + strandat 3478.928 kb on + strand, within MPMX20_03310at 3478.969 kb on + strand, within MPMX20_03310at 3479.045 kb on - strand, within MPMX20_03310at 3479.191 kb on + strand, within MPMX20_03310at 3479.203 kb on + strand, within MPMX20_03310at 3479.228 kb on + strand, within MPMX20_03310at 3479.246 kb on - strand, within MPMX20_03310at 3479.331 kb on - strand, within MPMX20_03310at 3479.341 kb on + strand, within MPMX20_03310at 3479.476 kb on + strand, within MPMX20_03310at 3479.558 kb on + strand, within MPMX20_03310at 3479.632 kb on - strand, within MPMX20_03310

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Per-strain Table

Position Strand Gene LocusTag Fraction LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
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3,477,518 + MPMX20_03308 0.36 -1.1
3,477,628 + MPMX20_03308 0.48 -0.9
3,477,699 + MPMX20_03308 0.55 +0.3
3,477,699 + MPMX20_03308 0.55 -0.5
3,477,704 + MPMX20_03308 0.56 +0.9
3,477,712 - MPMX20_03308 0.56 +0.3
3,477,760 - MPMX20_03308 0.61 -3.1
3,477,781 - MPMX20_03308 0.63 +0.9
3,477,796 - MPMX20_03308 0.65 -1.9
3,477,820 + MPMX20_03308 0.67 -1.1
3,477,828 - MPMX20_03308 0.68 +0.7
3,477,876 + MPMX20_03308 0.73 -0.1
3,477,902 + MPMX20_03308 0.76 +0.2
3,477,947 - MPMX20_03308 0.81 +0.3
3,478,077 - +0.1
3,478,089 + -0.9
3,478,130 + -2.1
3,478,221 + +0.2
3,478,404 + -2.7
3,478,412 - +0.4
3,478,489 + MPMX20_03309 0.14 -1.9
3,478,490 + MPMX20_03309 0.14 -2.1
3,478,607 + MPMX20_03309 0.60 -3.8
3,478,615 - MPMX20_03309 0.63 -2.4
3,478,615 - MPMX20_03309 0.63 -2.1
3,478,623 + MPMX20_03309 0.66 -0.1
3,478,651 + MPMX20_03309 0.77 -2.4
3,478,675 - MPMX20_03309 0.86 -0.9
3,478,744 + -0.1
3,478,928 + MPMX20_03310 0.10 -1.1
3,478,969 + MPMX20_03310 0.12 -2.4
3,479,045 - MPMX20_03310 0.17 -0.9
3,479,191 + MPMX20_03310 0.25 +0.3
3,479,203 + MPMX20_03310 0.26 -0.7
3,479,228 + MPMX20_03310 0.27 -0.7
3,479,246 - MPMX20_03310 0.28 -2.9
3,479,331 - MPMX20_03310 0.33 -0.1
3,479,341 + MPMX20_03310 0.34 -1.1
3,479,476 + MPMX20_03310 0.42 -0.5
3,479,558 + MPMX20_03310 0.46 -0.7
3,479,632 - MPMX20_03310 0.51 -1.0

Or see this region's nucleotide sequence