Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02701

Experiment: LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02700 and MPMX20_02701 are separated by 67 nucleotidesMPMX20_02701 and MPMX20_02702 are separated by 201 nucleotides MPMX20_02700: MPMX20_02700 - hypothetical protein, at 2,854,622 to 2,856,154 _02700 MPMX20_02701: MPMX20_02701 - Fatty acid metabolism regulator protein, at 2,856,222 to 2,856,941 _02701 MPMX20_02702: MPMX20_02702 - Na(+)/H(+) antiporter NhaB, at 2,857,143 to 2,858,681 _02702 Position (kb) 2856 2857Strain fitness (log2 ratio) -2 -1 0 1 2at 2855.240 kb on - strand, within MPMX20_02700at 2855.246 kb on + strand, within MPMX20_02700at 2855.328 kb on + strand, within MPMX20_02700at 2855.363 kb on - strand, within MPMX20_02700at 2855.385 kb on + strand, within MPMX20_02700at 2855.388 kb on - strand, within MPMX20_02700at 2855.393 kb on - strand, within MPMX20_02700at 2855.393 kb on - strand, within MPMX20_02700at 2855.488 kb on + strand, within MPMX20_02700at 2855.528 kb on - strand, within MPMX20_02700at 2855.578 kb on + strand, within MPMX20_02700at 2855.588 kb on + strand, within MPMX20_02700at 2855.588 kb on + strand, within MPMX20_02700at 2855.596 kb on - strand, within MPMX20_02700at 2855.606 kb on - strand, within MPMX20_02700at 2855.613 kb on + strand, within MPMX20_02700at 2855.634 kb on + strand, within MPMX20_02700at 2855.642 kb on - strand, within MPMX20_02700at 2855.714 kb on + strand, within MPMX20_02700at 2855.747 kb on - strand, within MPMX20_02700at 2855.789 kb on - strand, within MPMX20_02700at 2855.817 kb on + strand, within MPMX20_02700at 2855.839 kb on - strand, within MPMX20_02700at 2855.906 kb on - strand, within MPMX20_02700at 2855.933 kb on + strand, within MPMX20_02700at 2855.951 kb on - strand, within MPMX20_02700at 2855.990 kb on - strand, within MPMX20_02700at 2856.007 kb on + strandat 2856.017 kb on - strandat 2856.017 kb on - strandat 2856.069 kb on + strandat 2856.077 kb on - strandat 2856.151 kb on + strandat 2856.162 kb on - strandat 2856.162 kb on - strandat 2856.197 kb on + strandat 2856.236 kb on - strandat 2856.318 kb on + strand, within MPMX20_02701at 2856.545 kb on + strand, within MPMX20_02701at 2856.550 kb on + strand, within MPMX20_02701at 2856.555 kb on + strand, within MPMX20_02701at 2856.572 kb on + strand, within MPMX20_02701at 2856.574 kb on + strand, within MPMX20_02701at 2856.739 kb on + strand, within MPMX20_02701at 2856.975 kb on + strandat 2856.980 kb on + strandat 2857.000 kb on + strandat 2857.010 kb on + strandat 2857.078 kb on + strandat 2857.201 kb on + strandat 2857.201 kb on + strandat 2857.201 kb on + strandat 2857.209 kb on - strandat 2857.209 kb on - strandat 2857.209 kb on - strandat 2857.209 kb on - strandat 2857.223 kb on - strandat 2857.223 kb on - strandat 2857.231 kb on - strandat 2857.246 kb on + strandat 2857.254 kb on - strandat 2857.254 kb on - strandat 2857.290 kb on + strandat 2857.290 kb on + strandat 2857.302 kb on + strand, within MPMX20_02702at 2857.302 kb on + strand, within MPMX20_02702at 2857.314 kb on + strand, within MPMX20_02702at 2857.327 kb on + strand, within MPMX20_02702at 2857.335 kb on - strand, within MPMX20_02702at 2857.337 kb on + strand, within MPMX20_02702at 2857.384 kb on + strand, within MPMX20_02702at 2857.387 kb on - strand, within MPMX20_02702at 2857.513 kb on - strand, within MPMX20_02702at 2857.605 kb on - strand, within MPMX20_02702at 2857.607 kb on - strand, within MPMX20_02702at 2857.651 kb on + strand, within MPMX20_02702at 2857.663 kb on + strand, within MPMX20_02702at 2857.682 kb on + strand, within MPMX20_02702at 2857.749 kb on - strand, within MPMX20_02702at 2857.768 kb on - strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.884 kb on + strand, within MPMX20_02702at 2857.884 kb on + strand, within MPMX20_02702at 2857.884 kb on + strand, within MPMX20_02702at 2857.914 kb on - strand, within MPMX20_02702at 2857.914 kb on - strand, within MPMX20_02702at 2857.917 kb on - strand, within MPMX20_02702at 2857.917 kb on - strand, within MPMX20_02702at 2857.917 kb on - strand, within MPMX20_02702

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Per-strain Table

Position Strand Gene LocusTag Fraction LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
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2,855,240 - MPMX20_02700 0.40 -0.9
2,855,246 + MPMX20_02700 0.41 -0.2
2,855,328 + MPMX20_02700 0.46 -0.3
2,855,363 - MPMX20_02700 0.48 +1.1
2,855,385 + MPMX20_02700 0.50 -0.4
2,855,388 - MPMX20_02700 0.50 -2.3
2,855,393 - MPMX20_02700 0.50 +0.4
2,855,393 - MPMX20_02700 0.50 -0.2
2,855,488 + MPMX20_02700 0.56 -0.2
2,855,528 - MPMX20_02700 0.59 -0.6
2,855,578 + MPMX20_02700 0.62 -1.3
2,855,588 + MPMX20_02700 0.63 -0.0
2,855,588 + MPMX20_02700 0.63 -0.4
2,855,596 - MPMX20_02700 0.64 +0.4
2,855,606 - MPMX20_02700 0.64 +0.3
2,855,613 + MPMX20_02700 0.65 -0.5
2,855,634 + MPMX20_02700 0.66 -1.3
2,855,642 - MPMX20_02700 0.67 +0.7
2,855,714 + MPMX20_02700 0.71 -2.2
2,855,747 - MPMX20_02700 0.73 -0.0
2,855,789 - MPMX20_02700 0.76 +0.0
2,855,817 + MPMX20_02700 0.78 -1.0
2,855,839 - MPMX20_02700 0.79 +0.2
2,855,906 - MPMX20_02700 0.84 -1.0
2,855,933 + MPMX20_02700 0.86 +0.2
2,855,951 - MPMX20_02700 0.87 -0.5
2,855,990 - MPMX20_02700 0.89 -1.3
2,856,007 + -0.2
2,856,017 - -0.4
2,856,017 - +0.2
2,856,069 + -0.4
2,856,077 - -0.0
2,856,151 + +0.2
2,856,162 - -2.1
2,856,162 - +0.4
2,856,197 + +0.8
2,856,236 - -1.1
2,856,318 + MPMX20_02701 0.13 -0.8
2,856,545 + MPMX20_02701 0.45 +0.8
2,856,550 + MPMX20_02701 0.46 -2.2
2,856,555 + MPMX20_02701 0.46 -2.5
2,856,572 + MPMX20_02701 0.49 +0.3
2,856,574 + MPMX20_02701 0.49 -1.5
2,856,739 + MPMX20_02701 0.72 -2.0
2,856,975 + -1.6
2,856,980 + +0.6
2,857,000 + -0.8
2,857,010 + -1.2
2,857,078 + -0.8
2,857,201 + +2.6
2,857,201 + -0.7
2,857,201 + -0.8
2,857,209 - -0.8
2,857,209 - -0.7
2,857,209 - +0.3
2,857,209 - -2.6
2,857,223 - +0.6
2,857,223 - +0.0
2,857,231 - +1.7
2,857,246 + -0.1
2,857,254 - -1.2
2,857,254 - -0.6
2,857,290 + -0.8
2,857,290 + +0.7
2,857,302 + MPMX20_02702 0.10 +0.1
2,857,302 + MPMX20_02702 0.10 -0.3
2,857,314 + MPMX20_02702 0.11 -0.1
2,857,327 + MPMX20_02702 0.12 +0.6
2,857,335 - MPMX20_02702 0.12 -0.6
2,857,337 + MPMX20_02702 0.13 +0.4
2,857,384 + MPMX20_02702 0.16 -0.7
2,857,387 - MPMX20_02702 0.16 -0.6
2,857,513 - MPMX20_02702 0.24 +0.2
2,857,605 - MPMX20_02702 0.30 +0.5
2,857,607 - MPMX20_02702 0.30 -0.4
2,857,651 + MPMX20_02702 0.33 +0.1
2,857,663 + MPMX20_02702 0.34 +0.6
2,857,682 + MPMX20_02702 0.35 +0.2
2,857,749 - MPMX20_02702 0.39 +0.4
2,857,768 - MPMX20_02702 0.41 +0.1
2,857,770 + MPMX20_02702 0.41 +0.1
2,857,770 + MPMX20_02702 0.41 +0.1
2,857,770 + MPMX20_02702 0.41 +0.6
2,857,770 + MPMX20_02702 0.41 +0.6
2,857,884 + MPMX20_02702 0.48 -0.2
2,857,884 + MPMX20_02702 0.48 +0.4
2,857,884 + MPMX20_02702 0.48 +0.8
2,857,914 - MPMX20_02702 0.50 -0.7
2,857,914 - MPMX20_02702 0.50 +0.4
2,857,917 - MPMX20_02702 0.50 +0.9
2,857,917 - MPMX20_02702 0.50 -1.2
2,857,917 - MPMX20_02702 0.50 -0.4

Or see this region's nucleotide sequence