Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02305

Experiment: LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02304 and MPMX20_02305 are separated by 275 nucleotidesMPMX20_02305 and MPMX20_02306 are separated by 156 nucleotides MPMX20_02304: MPMX20_02304 - hypothetical protein, at 2,424,293 to 2,425,333 _02304 MPMX20_02305: MPMX20_02305 - hypothetical protein, at 2,425,609 to 2,425,863 _02305 MPMX20_02306: MPMX20_02306 - hypothetical protein, at 2,426,020 to 2,426,985 _02306 Position (kb) 2425 2426Strain fitness (log2 ratio) -2 -1 0 1 2at 2424.686 kb on - strand, within MPMX20_02304at 2424.715 kb on - strand, within MPMX20_02304at 2424.743 kb on - strand, within MPMX20_02304at 2424.794 kb on - strand, within MPMX20_02304at 2424.809 kb on - strand, within MPMX20_02304at 2424.809 kb on - strand, within MPMX20_02304at 2424.815 kb on - strand, within MPMX20_02304at 2424.815 kb on - strand, within MPMX20_02304at 2424.831 kb on - strand, within MPMX20_02304at 2424.831 kb on - strand, within MPMX20_02304at 2424.831 kb on - strand, within MPMX20_02304at 2424.831 kb on - strand, within MPMX20_02304at 2424.850 kb on - strand, within MPMX20_02304at 2424.850 kb on - strand, within MPMX20_02304at 2424.850 kb on - strand, within MPMX20_02304at 2424.879 kb on - strand, within MPMX20_02304at 2424.893 kb on - strand, within MPMX20_02304at 2425.064 kb on + strand, within MPMX20_02304at 2425.117 kb on - strand, within MPMX20_02304at 2425.166 kb on - strand, within MPMX20_02304at 2425.191 kb on - strand, within MPMX20_02304at 2425.191 kb on - strand, within MPMX20_02304at 2425.196 kb on - strand, within MPMX20_02304at 2425.198 kb on - strand, within MPMX20_02304at 2425.208 kb on + strand, within MPMX20_02304at 2425.254 kb on + strandat 2425.267 kb on + strandat 2425.267 kb on + strandat 2425.267 kb on + strandat 2425.267 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.277 kb on + strandat 2425.280 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.287 kb on + strandat 2425.292 kb on + strandat 2425.321 kb on + strandat 2425.321 kb on + strandat 2425.321 kb on + strandat 2425.321 kb on + strandat 2425.335 kb on + strandat 2425.335 kb on + strandat 2425.335 kb on + strandat 2425.339 kb on + strandat 2425.451 kb on - strandat 2425.603 kb on - strandat 2425.649 kb on - strand, within MPMX20_02305at 2425.721 kb on - strand, within MPMX20_02305at 2425.724 kb on - strand, within MPMX20_02305at 2425.724 kb on - strand, within MPMX20_02305at 2425.724 kb on - strand, within MPMX20_02305at 2425.729 kb on - strand, within MPMX20_02305at 2425.860 kb on + strandat 2425.906 kb on + strandat 2425.910 kb on + strandat 2425.927 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
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2,424,686 - MPMX20_02304 0.38 +0.2
2,424,715 - MPMX20_02304 0.41 -0.9
2,424,743 - MPMX20_02304 0.43 -0.4
2,424,794 - MPMX20_02304 0.48 +0.2
2,424,809 - MPMX20_02304 0.50 +0.7
2,424,809 - MPMX20_02304 0.50 +0.0
2,424,815 - MPMX20_02304 0.50 -0.5
2,424,815 - MPMX20_02304 0.50 -0.6
2,424,831 - MPMX20_02304 0.52 -0.2
2,424,831 - MPMX20_02304 0.52 -0.4
2,424,831 - MPMX20_02304 0.52 +0.6
2,424,831 - MPMX20_02304 0.52 -1.5
2,424,850 - MPMX20_02304 0.54 +1.4
2,424,850 - MPMX20_02304 0.54 -1.4
2,424,850 - MPMX20_02304 0.54 -0.9
2,424,879 - MPMX20_02304 0.56 +2.2
2,424,893 - MPMX20_02304 0.58 -2.4
2,425,064 + MPMX20_02304 0.74 +1.1
2,425,117 - MPMX20_02304 0.79 +2.0
2,425,166 - MPMX20_02304 0.84 -1.5
2,425,191 - MPMX20_02304 0.86 +1.4
2,425,191 - MPMX20_02304 0.86 -0.5
2,425,196 - MPMX20_02304 0.87 +1.4
2,425,198 - MPMX20_02304 0.87 +0.1
2,425,208 + MPMX20_02304 0.88 +0.0
2,425,254 + -0.2
2,425,267 + -0.8
2,425,267 + -0.8
2,425,267 + +0.2
2,425,267 + +1.4
2,425,277 + +0.8
2,425,277 + -1.2
2,425,277 + +0.8
2,425,277 + -0.2
2,425,277 + +0.1
2,425,277 + +0.0
2,425,277 + -2.2
2,425,277 + -0.2
2,425,277 + +0.8
2,425,277 + -2.2
2,425,280 + -0.8
2,425,287 + +0.8
2,425,287 + +0.4
2,425,287 + -0.1
2,425,287 + +0.8
2,425,287 + +0.8
2,425,287 + -0.3
2,425,287 + +0.8
2,425,287 + +1.4
2,425,287 + +1.8
2,425,287 + -0.3
2,425,287 + -1.6
2,425,287 + -0.8
2,425,287 + -0.6
2,425,287 + -0.6
2,425,287 + -0.6
2,425,287 + +0.4
2,425,287 + -0.2
2,425,287 + -1.9
2,425,287 + +0.2
2,425,292 + -1.0
2,425,321 + -0.2
2,425,321 + -0.2
2,425,321 + -0.2
2,425,321 + -0.6
2,425,335 + -1.6
2,425,335 + -1.2
2,425,335 + -0.8
2,425,339 + -1.9
2,425,451 - -0.5
2,425,603 - -1.3
2,425,649 - MPMX20_02305 0.16 -0.5
2,425,721 - MPMX20_02305 0.44 -0.9
2,425,724 - MPMX20_02305 0.45 -0.4
2,425,724 - MPMX20_02305 0.45 -0.5
2,425,724 - MPMX20_02305 0.45 -2.6
2,425,729 - MPMX20_02305 0.47 -1.6
2,425,860 + -0.7
2,425,906 + -0.6
2,425,910 + +2.1
2,425,927 + +0.1

Or see this region's nucleotide sequence