Experiment: LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00806 and MPMX20_00807 are separated by 123 nucleotides MPMX20_00807 and MPMX20_00808 are separated by 14 nucleotides
MPMX20_00806: MPMX20_00806 - Pyruvate dehydrogenase complex repressor, at 843,462 to 844,226
_00806
MPMX20_00807: MPMX20_00807 - Pyruvate dehydrogenase E1 component, at 844,350 to 847,013
_00807
MPMX20_00808: MPMX20_00808 - Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, at 847,028 to 848,923
_00808
Position (kb) 844
845
846
847
848 Strain fitness (log2 ratio) -2
-1
0
1 at 843.359 kb on + strand at 843.385 kb on - strand at 843.761 kb on + strand, within MPMX20_00806 at 843.805 kb on - strand, within MPMX20_00806 at 843.812 kb on + strand, within MPMX20_00806 at 843.812 kb on + strand, within MPMX20_00806 at 843.820 kb on - strand, within MPMX20_00806 at 843.822 kb on + strand, within MPMX20_00806 at 843.822 kb on + strand, within MPMX20_00806 at 843.822 kb on + strand, within MPMX20_00806 at 843.859 kb on + strand, within MPMX20_00806 at 843.966 kb on + strand, within MPMX20_00806 at 843.976 kb on + strand, within MPMX20_00806 at 844.022 kb on + strand, within MPMX20_00806 at 844.112 kb on - strand, within MPMX20_00806 at 844.269 kb on + strand at 844.407 kb on - strand at 844.407 kb on - strand at 844.407 kb on - strand at 844.443 kb on - strand at 844.773 kb on + strand, within MPMX20_00807 at 844.816 kb on - strand, within MPMX20_00807 at 845.008 kb on + strand, within MPMX20_00807 at 845.008 kb on + strand, within MPMX20_00807 at 845.016 kb on - strand, within MPMX20_00807 at 845.016 kb on - strand, within MPMX20_00807 at 845.208 kb on + strand, within MPMX20_00807 at 845.236 kb on - strand, within MPMX20_00807 at 845.280 kb on - strand, within MPMX20_00807 at 845.343 kb on + strand, within MPMX20_00807 at 845.693 kb on + strand, within MPMX20_00807 at 846.044 kb on - strand, within MPMX20_00807 at 846.044 kb on - strand, within MPMX20_00807 at 846.134 kb on + strand, within MPMX20_00807 at 846.160 kb on + strand, within MPMX20_00807 at 846.261 kb on + strand, within MPMX20_00807 at 846.584 kb on - strand, within MPMX20_00807 at 846.601 kb on - strand, within MPMX20_00807 at 846.607 kb on + strand, within MPMX20_00807 at 846.620 kb on - strand, within MPMX20_00807 at 846.620 kb on - strand, within MPMX20_00807 at 846.620 kb on - strand, within MPMX20_00807 at 846.722 kb on + strand, within MPMX20_00807 at 846.904 kb on - strand at 847.015 kb on - strand at 847.054 kb on + strand at 847.137 kb on - strand at 847.794 kb on + strand, within MPMX20_00808
Per-strain Table
Position Strand Gene LocusTag Fraction LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct remove 843,359 + +1.3 843,385 - -2.3 843,761 + MPMX20_00806 0.39 -0.1 843,805 - MPMX20_00806 0.45 +0.9 843,812 + MPMX20_00806 0.46 -1.1 843,812 + MPMX20_00806 0.46 -1.3 843,820 - MPMX20_00806 0.47 +0.9 843,822 + MPMX20_00806 0.47 -0.0 843,822 + MPMX20_00806 0.47 -0.1 843,822 + MPMX20_00806 0.47 +0.5 843,859 + MPMX20_00806 0.52 +1.4 843,966 + MPMX20_00806 0.66 -1.2 843,976 + MPMX20_00806 0.67 +0.6 844,022 + MPMX20_00806 0.73 -0.1 844,112 - MPMX20_00806 0.85 -1.7 844,269 + -0.8 844,407 - -1.1 844,407 - -1.5 844,407 - -0.7 844,443 - -1.1 844,773 + MPMX20_00807 0.16 -0.1 844,816 - MPMX20_00807 0.17 -2.3 845,008 + MPMX20_00807 0.25 -0.5 845,008 + MPMX20_00807 0.25 -1.9 845,016 - MPMX20_00807 0.25 -2.5 845,016 - MPMX20_00807 0.25 +0.9 845,208 + MPMX20_00807 0.32 -0.1 845,236 - MPMX20_00807 0.33 -1.7 845,280 - MPMX20_00807 0.35 -0.1 845,343 + MPMX20_00807 0.37 -1.9 845,693 + MPMX20_00807 0.50 -1.1 846,044 - MPMX20_00807 0.64 -1.1 846,044 - MPMX20_00807 0.64 -0.6 846,134 + MPMX20_00807 0.67 -0.1 846,160 + MPMX20_00807 0.68 -0.7 846,261 + MPMX20_00807 0.72 +0.1 846,584 - MPMX20_00807 0.84 -1.1 846,601 - MPMX20_00807 0.84 -2.5 846,607 + MPMX20_00807 0.85 -0.7 846,620 - MPMX20_00807 0.85 -0.1 846,620 - MPMX20_00807 0.85 -2.1 846,620 - MPMX20_00807 0.85 +0.9 846,722 + MPMX20_00807 0.89 -0.6 846,904 - -0.4 847,015 - -1.7 847,054 + -1.9 847,137 - +0.1 847,794 + MPMX20_00808 0.40 -1.1
Or see this region's nucleotide sequence