Experiment: LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00738 and MPMX20_00739 are separated by 454 nucleotides MPMX20_00739 and MPMX20_00740 are separated by 18 nucleotides
MPMX20_00738: MPMX20_00738 - 4-hydroxy-tetrahydrodipicolinate reductase, at 761,869 to 762,690
_00738
MPMX20_00739: MPMX20_00739 - Carbamoyl-phosphate synthase small chain, at 763,145 to 764,293
_00739
MPMX20_00740: MPMX20_00740 - Carbamoyl-phosphate synthase large chain, at 764,312 to 767,536
_00740
Position (kb) 763
764
765 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 763.157 kb on + strand at 763.206 kb on - strand at 763.331 kb on + strand, within MPMX20_00739 at 763.435 kb on + strand, within MPMX20_00739 at 763.443 kb on - strand, within MPMX20_00739 at 763.456 kb on + strand, within MPMX20_00739 at 763.488 kb on + strand, within MPMX20_00739 at 763.539 kb on - strand, within MPMX20_00739 at 763.555 kb on - strand, within MPMX20_00739 at 763.598 kb on + strand, within MPMX20_00739 at 763.608 kb on + strand, within MPMX20_00739 at 763.616 kb on - strand, within MPMX20_00739 at 763.650 kb on + strand, within MPMX20_00739 at 763.653 kb on + strand, within MPMX20_00739 at 763.856 kb on - strand, within MPMX20_00739 at 763.875 kb on + strand, within MPMX20_00739 at 763.985 kb on + strand, within MPMX20_00739 at 763.990 kb on - strand, within MPMX20_00739 at 764.069 kb on + strand, within MPMX20_00739 at 764.077 kb on - strand, within MPMX20_00739 at 764.153 kb on + strand, within MPMX20_00739 at 764.173 kb on + strand, within MPMX20_00739 at 764.283 kb on - strand at 764.410 kb on - strand at 764.444 kb on + strand at 764.452 kb on - strand at 764.452 kb on - strand at 764.452 kb on - strand at 764.454 kb on + strand at 764.454 kb on + strand at 764.462 kb on - strand at 764.567 kb on + strand at 764.594 kb on + strand at 764.602 kb on - strand at 764.631 kb on + strand at 764.695 kb on - strand, within MPMX20_00740 at 764.759 kb on - strand, within MPMX20_00740 at 764.863 kb on - strand, within MPMX20_00740 at 764.903 kb on - strand, within MPMX20_00740 at 764.910 kb on + strand, within MPMX20_00740 at 765.068 kb on + strand, within MPMX20_00740 at 765.260 kb on - strand, within MPMX20_00740
Per-strain Table
Position Strand Gene LocusTag Fraction LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct remove 763,157 + +1.1 763,206 - -3.2 763,331 + MPMX20_00739 0.16 -1.8 763,435 + MPMX20_00739 0.25 +1.5 763,443 - MPMX20_00739 0.26 -2.1 763,456 + MPMX20_00739 0.27 -3.7 763,488 + MPMX20_00739 0.30 -1.7 763,539 - MPMX20_00739 0.34 -3.4 763,555 - MPMX20_00739 0.36 -3.1 763,598 + MPMX20_00739 0.39 +0.3 763,608 + MPMX20_00739 0.40 -0.5 763,616 - MPMX20_00739 0.41 -2.3 763,650 + MPMX20_00739 0.44 -1.1 763,653 + MPMX20_00739 0.44 -0.5 763,856 - MPMX20_00739 0.62 -0.9 763,875 + MPMX20_00739 0.64 -0.7 763,985 + MPMX20_00739 0.73 -0.6 763,990 - MPMX20_00739 0.74 -1.0 764,069 + MPMX20_00739 0.80 -2.1 764,077 - MPMX20_00739 0.81 -1.5 764,153 + MPMX20_00739 0.88 -2.3 764,173 + MPMX20_00739 0.89 -0.1 764,283 - -1.2 764,410 - -1.9 764,444 + -1.7 764,452 - -2.3 764,452 - +0.6 764,452 - +1.2 764,454 + -0.1 764,454 + -0.9 764,462 - -0.0 764,567 + -1.7 764,594 + -0.9 764,602 - -1.8 764,631 + -1.5 764,695 - MPMX20_00740 0.12 -0.9 764,759 - MPMX20_00740 0.14 -1.1 764,863 - MPMX20_00740 0.17 -2.1 764,903 - MPMX20_00740 0.18 -2.5 764,910 + MPMX20_00740 0.19 -1.1 765,068 + MPMX20_00740 0.23 -0.2 765,260 - MPMX20_00740 0.29 -0.5
Or see this region's nucleotide sequence