Experiment: L-Lactate (C) with 10 mM Sodium Chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_001700 and TX73_001705 overlap by 11 nucleotides TX73_001705 and TX73_001710 are separated by 51 nucleotides TX73_001710 and TX73_001715 are separated by 154 nucleotides
TX73_001700: TX73_001700 - radical SAM family heme chaperone HemW, at 354,871 to 356,028
_001700
TX73_001705: TX73_001705 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase, at 356,018 to 356,650
_001705
TX73_001710: TX73_001710 - ribonuclease PH, at 356,702 to 357,415
_001710
TX73_001715: TX73_001715 - heat-inducible transcriptional repressor HrcA, at 357,570 to 358,658
_001715
Position (kb) 356
357 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 356.015 kb on + strand at 356.015 kb on + strand at 356.017 kb on - strand at 356.023 kb on - strand at 356.031 kb on - strand at 356.034 kb on + strand at 356.036 kb on - strand at 356.051 kb on - strand at 356.094 kb on + strand, within TX73_001705 at 356.109 kb on + strand, within TX73_001705 at 356.122 kb on - strand, within TX73_001705 at 356.130 kb on - strand, within TX73_001705 at 356.135 kb on + strand, within TX73_001705 at 356.143 kb on - strand, within TX73_001705 at 356.143 kb on - strand, within TX73_001705 at 356.148 kb on + strand, within TX73_001705 at 356.148 kb on + strand, within TX73_001705 at 356.154 kb on + strand, within TX73_001705 at 356.156 kb on - strand, within TX73_001705 at 356.161 kb on + strand, within TX73_001705 at 356.169 kb on - strand, within TX73_001705 at 356.169 kb on - strand, within TX73_001705 at 356.169 kb on - strand, within TX73_001705 at 356.169 kb on - strand, within TX73_001705 at 356.181 kb on + strand, within TX73_001705 at 356.191 kb on - strand, within TX73_001705 at 356.198 kb on + strand, within TX73_001705 at 356.198 kb on + strand, within TX73_001705 at 356.202 kb on + strand, within TX73_001705 at 356.204 kb on + strand, within TX73_001705 at 356.206 kb on - strand, within TX73_001705 at 356.219 kb on + strand, within TX73_001705 at 356.219 kb on + strand, within TX73_001705 at 356.219 kb on + strand, within TX73_001705 at 356.227 kb on - strand, within TX73_001705 at 356.227 kb on - strand, within TX73_001705 at 356.237 kb on - strand, within TX73_001705 at 356.245 kb on - strand, within TX73_001705 at 356.250 kb on - strand, within TX73_001705 at 356.251 kb on + strand, within TX73_001705 at 356.253 kb on + strand, within TX73_001705 at 356.261 kb on - strand, within TX73_001705 at 356.270 kb on + strand, within TX73_001705 at 356.271 kb on - strand, within TX73_001705 at 356.315 kb on + strand, within TX73_001705 at 356.325 kb on + strand, within TX73_001705 at 356.333 kb on - strand, within TX73_001705 at 356.346 kb on - strand, within TX73_001705 at 356.359 kb on + strand, within TX73_001705 at 356.365 kb on + strand, within TX73_001705 at 356.378 kb on + strand, within TX73_001705 at 356.382 kb on + strand, within TX73_001705 at 356.387 kb on + strand, within TX73_001705 at 356.387 kb on + strand, within TX73_001705 at 356.387 kb on + strand, within TX73_001705 at 356.395 kb on - strand, within TX73_001705 at 356.395 kb on - strand, within TX73_001705 at 356.395 kb on - strand, within TX73_001705 at 356.395 kb on - strand, within TX73_001705 at 356.400 kb on + strand, within TX73_001705 at 356.431 kb on - strand, within TX73_001705 at 356.457 kb on + strand, within TX73_001705 at 356.465 kb on - strand, within TX73_001705 at 356.468 kb on + strand, within TX73_001705 at 356.470 kb on + strand, within TX73_001705 at 356.483 kb on - strand, within TX73_001705 at 356.483 kb on - strand, within TX73_001705 at 356.488 kb on - strand, within TX73_001705 at 356.488 kb on - strand, within TX73_001705 at 356.493 kb on + strand, within TX73_001705 at 356.494 kb on + strand, within TX73_001705 at 356.569 kb on - strand, within TX73_001705 at 356.577 kb on - strand, within TX73_001705 at 356.578 kb on - strand, within TX73_001705 at 356.580 kb on - strand, within TX73_001705 at 356.596 kb on + strand at 356.635 kb on - strand at 356.645 kb on + strand at 356.661 kb on + strand at 356.661 kb on + strand at 356.661 kb on + strand at 356.661 kb on + strand at 356.667 kb on - strand at 356.669 kb on - strand at 356.669 kb on - strand at 356.669 kb on - strand at 356.669 kb on - strand at 356.669 kb on - strand at 356.669 kb on - strand at 356.674 kb on - strand at 356.674 kb on - strand at 356.680 kb on + strand at 356.733 kb on - strand at 356.733 kb on - strand at 356.735 kb on - strand at 356.746 kb on - strand at 356.747 kb on + strand at 356.755 kb on - strand at 356.767 kb on + strand at 356.783 kb on - strand, within TX73_001710 at 356.790 kb on + strand, within TX73_001710 at 356.798 kb on + strand, within TX73_001710 at 356.808 kb on - strand, within TX73_001710 at 356.810 kb on + strand, within TX73_001710 at 356.810 kb on + strand, within TX73_001710 at 356.810 kb on + strand, within TX73_001710 at 356.810 kb on + strand, within TX73_001710 at 356.811 kb on - strand, within TX73_001710 at 356.813 kb on - strand, within TX73_001710 at 356.818 kb on - strand, within TX73_001710 at 356.818 kb on - strand, within TX73_001710 at 356.818 kb on - strand, within TX73_001710 at 356.818 kb on - strand, within TX73_001710 at 356.818 kb on - strand, within TX73_001710 at 356.831 kb on - strand, within TX73_001710 at 356.839 kb on - strand, within TX73_001710 at 356.839 kb on - strand, within TX73_001710 at 356.844 kb on + strand, within TX73_001710 at 356.849 kb on - strand, within TX73_001710 at 356.870 kb on - strand, within TX73_001710 at 356.878 kb on + strand, within TX73_001710 at 356.884 kb on - strand, within TX73_001710 at 356.891 kb on - strand, within TX73_001710 at 356.912 kb on + strand, within TX73_001710 at 356.920 kb on - strand, within TX73_001710 at 356.922 kb on + strand, within TX73_001710 at 356.922 kb on + strand, within TX73_001710 at 356.928 kb on - strand, within TX73_001710 at 356.930 kb on + strand, within TX73_001710 at 356.953 kb on + strand, within TX73_001710 at 356.953 kb on + strand, within TX73_001710 at 356.968 kb on - strand, within TX73_001710 at 356.988 kb on - strand, within TX73_001710 at 356.997 kb on - strand, within TX73_001710 at 357.015 kb on - strand, within TX73_001710 at 357.015 kb on - strand, within TX73_001710 at 357.015 kb on - strand, within TX73_001710 at 357.015 kb on - strand, within TX73_001710 at 357.020 kb on - strand, within TX73_001710 at 357.026 kb on + strand, within TX73_001710 at 357.026 kb on + strand, within TX73_001710 at 357.031 kb on - strand, within TX73_001710 at 357.035 kb on + strand, within TX73_001710 at 357.048 kb on + strand, within TX73_001710 at 357.056 kb on - strand, within TX73_001710 at 357.062 kb on - strand, within TX73_001710 at 357.064 kb on - strand, within TX73_001710 at 357.064 kb on - strand, within TX73_001710 at 357.064 kb on - strand, within TX73_001710 at 357.066 kb on + strand, within TX73_001710 at 357.071 kb on + strand, within TX73_001710 at 357.074 kb on - strand, within TX73_001710 at 357.074 kb on - strand, within TX73_001710 at 357.076 kb on + strand, within TX73_001710 at 357.091 kb on + strand, within TX73_001710 at 357.100 kb on + strand, within TX73_001710 at 357.109 kb on + strand, within TX73_001710 at 357.115 kb on - strand, within TX73_001710 at 357.117 kb on - strand, within TX73_001710 at 357.176 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.199 kb on + strand, within TX73_001710 at 357.207 kb on - strand, within TX73_001710 at 357.207 kb on - strand, within TX73_001710 at 357.207 kb on - strand, within TX73_001710 at 357.207 kb on - strand, within TX73_001710 at 357.207 kb on - strand, within TX73_001710 at 357.210 kb on - strand, within TX73_001710 at 357.212 kb on - strand, within TX73_001710 at 357.244 kb on + strand, within TX73_001710 at 357.245 kb on + strand, within TX73_001710 at 357.251 kb on + strand, within TX73_001710 at 357.251 kb on + strand, within TX73_001710 at 357.253 kb on - strand, within TX73_001710 at 357.259 kb on - strand, within TX73_001710 at 357.259 kb on - strand, within TX73_001710 at 357.259 kb on - strand, within TX73_001710 at 357.267 kb on - strand, within TX73_001710 at 357.270 kb on + strand, within TX73_001710 at 357.283 kb on + strand, within TX73_001710 at 357.283 kb on + strand, within TX73_001710 at 357.289 kb on + strand, within TX73_001710 at 357.289 kb on + strand, within TX73_001710 at 357.289 kb on + strand, within TX73_001710 at 357.299 kb on + strand, within TX73_001710 at 357.299 kb on + strand, within TX73_001710 at 357.299 kb on + strand, within TX73_001710 at 357.301 kb on + strand, within TX73_001710 at 357.304 kb on + strand, within TX73_001710 at 357.304 kb on + strand, within TX73_001710 at 357.304 kb on + strand, within TX73_001710 at 357.304 kb on + strand, within TX73_001710 at 357.304 kb on + strand, within TX73_001710 at 357.304 kb on + strand, within TX73_001710 at 357.304 kb on + strand, within TX73_001710 at 357.311 kb on - strand, within TX73_001710 at 357.312 kb on - strand, within TX73_001710 at 357.312 kb on - strand, within TX73_001710 at 357.312 kb on - strand, within TX73_001710 at 357.312 kb on - strand, within TX73_001710 at 357.312 kb on - strand, within TX73_001710 at 357.312 kb on - strand, within TX73_001710 at 357.315 kb on + strand, within TX73_001710 at 357.325 kb on + strand, within TX73_001710 at 357.331 kb on + strand, within TX73_001710 at 357.332 kb on + strand, within TX73_001710 at 357.345 kb on + strand at 357.348 kb on - strand at 357.351 kb on - strand at 357.356 kb on - strand at 357.379 kb on + strand at 357.407 kb on + strand at 357.430 kb on - strand at 357.457 kb on - strand at 357.459 kb on + strand at 357.459 kb on + strand at 357.460 kb on - strand at 357.467 kb on - strand at 357.492 kb on - strand at 357.492 kb on - strand at 357.492 kb on - strand at 357.498 kb on - strand at 357.499 kb on + strand at 357.504 kb on + strand at 357.504 kb on + strand at 357.504 kb on + strand at 357.504 kb on + strand at 357.512 kb on - strand at 357.512 kb on - strand at 357.512 kb on - strand at 357.512 kb on - strand at 357.512 kb on - strand at 357.512 kb on - strand at 357.512 kb on - strand at 357.518 kb on + strand at 357.519 kb on + strand at 357.530 kb on + strand at 357.538 kb on - strand at 357.538 kb on - strand at 357.562 kb on - strand at 357.562 kb on - strand at 357.566 kb on - strand at 357.574 kb on - strand at 357.578 kb on + strand at 357.592 kb on + strand at 357.599 kb on - strand at 357.607 kb on + strand at 357.610 kb on - strand at 357.613 kb on + strand at 357.613 kb on + strand at 357.618 kb on + strand at 357.621 kb on - strand at 357.626 kb on - strand at 357.630 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) with 10 mM Sodium Chloride remove 356,015 + +2.5 356,015 + +0.2 356,017 - -2.1 356,023 - +0.2 356,031 - +0.8 356,034 + -1.2 356,036 - +2.3 356,051 - -0.7 356,094 + TX73_001705 0.12 -1.1 356,109 + TX73_001705 0.14 +1.0 356,122 - TX73_001705 0.16 +1.2 356,130 - TX73_001705 0.18 -0.2 356,135 + TX73_001705 0.18 +0.8 356,143 - TX73_001705 0.20 -1.2 356,143 - TX73_001705 0.20 -0.0 356,148 + TX73_001705 0.21 +1.3 356,148 + TX73_001705 0.21 +1.4 356,154 + TX73_001705 0.21 -0.9 356,156 - TX73_001705 0.22 -2.0 356,161 + TX73_001705 0.23 +1.0 356,169 - TX73_001705 0.24 -1.0 356,169 - TX73_001705 0.24 -0.2 356,169 - TX73_001705 0.24 +1.1 356,169 - TX73_001705 0.24 +1.6 356,181 + TX73_001705 0.26 -0.5 356,191 - TX73_001705 0.27 -1.5 356,198 + TX73_001705 0.28 +0.8 356,198 + TX73_001705 0.28 +1.1 356,202 + TX73_001705 0.29 +0.7 356,204 + TX73_001705 0.29 +0.6 356,206 - TX73_001705 0.30 -0.9 356,219 + TX73_001705 0.32 -1.3 356,219 + TX73_001705 0.32 +1.1 356,219 + TX73_001705 0.32 +0.6 356,227 - TX73_001705 0.33 +0.8 356,227 - TX73_001705 0.33 +4.5 356,237 - TX73_001705 0.35 +0.1 356,245 - TX73_001705 0.36 -0.5 356,250 - TX73_001705 0.37 -0.9 356,251 + TX73_001705 0.37 +0.9 356,253 + TX73_001705 0.37 +0.4 356,261 - TX73_001705 0.38 +0.4 356,270 + TX73_001705 0.40 -1.4 356,271 - TX73_001705 0.40 -1.2 356,315 + TX73_001705 0.47 -2.4 356,325 + TX73_001705 0.48 +1.2 356,333 - TX73_001705 0.50 -0.2 356,346 - TX73_001705 0.52 -1.3 356,359 + TX73_001705 0.54 -0.9 356,365 + TX73_001705 0.55 +2.8 356,378 + TX73_001705 0.57 +1.8 356,382 + TX73_001705 0.58 -0.1 356,387 + TX73_001705 0.58 +0.2 356,387 + TX73_001705 0.58 -1.7 356,387 + TX73_001705 0.58 +2.7 356,395 - TX73_001705 0.60 -2.0 356,395 - TX73_001705 0.60 -0.2 356,395 - TX73_001705 0.60 +1.1 356,395 - TX73_001705 0.60 -0.7 356,400 + TX73_001705 0.60 -1.1 356,431 - TX73_001705 0.65 -0.7 356,457 + TX73_001705 0.69 +1.0 356,465 - TX73_001705 0.71 +1.1 356,468 + TX73_001705 0.71 +2.1 356,470 + TX73_001705 0.71 +1.5 356,483 - TX73_001705 0.73 +0.4 356,483 - TX73_001705 0.73 +1.8 356,488 - TX73_001705 0.74 -1.6 356,488 - TX73_001705 0.74 -0.2 356,493 + TX73_001705 0.75 -1.4 356,494 + TX73_001705 0.75 +0.7 356,569 - TX73_001705 0.87 -2.1 356,577 - TX73_001705 0.88 +1.4 356,578 - TX73_001705 0.88 -0.2 356,580 - TX73_001705 0.89 +0.2 356,596 + +0.7 356,635 - +0.3 356,645 + -1.1 356,661 + +1.2 356,661 + -2.8 356,661 + +2.0 356,661 + +0.9 356,667 - +1.9 356,669 - +1.5 356,669 - -1.6 356,669 - +0.3 356,669 - -0.7 356,669 - +2.2 356,669 - +1.4 356,674 - -2.2 356,674 - -1.9 356,680 + -0.5 356,733 - +0.6 356,733 - +0.6 356,735 - -0.7 356,746 - +1.6 356,747 + +1.0 356,755 - +1.8 356,767 + +1.5 356,783 - TX73_001710 0.11 +1.8 356,790 + TX73_001710 0.12 +1.4 356,798 + TX73_001710 0.13 -0.8 356,808 - TX73_001710 0.15 +0.4 356,810 + TX73_001710 0.15 +1.7 356,810 + TX73_001710 0.15 +1.0 356,810 + TX73_001710 0.15 +0.9 356,810 + TX73_001710 0.15 +0.7 356,811 - TX73_001710 0.15 -0.6 356,813 - TX73_001710 0.16 -0.9 356,818 - TX73_001710 0.16 +0.2 356,818 - TX73_001710 0.16 -1.2 356,818 - TX73_001710 0.16 -0.8 356,818 - TX73_001710 0.16 -0.6 356,818 - TX73_001710 0.16 -1.0 356,831 - TX73_001710 0.18 +0.5 356,839 - TX73_001710 0.19 -1.2 356,839 - TX73_001710 0.19 +0.9 356,844 + TX73_001710 0.20 +0.2 356,849 - TX73_001710 0.21 +0.4 356,870 - TX73_001710 0.24 -1.4 356,878 + TX73_001710 0.25 +2.0 356,884 - TX73_001710 0.25 +0.7 356,891 - TX73_001710 0.26 +0.1 356,912 + TX73_001710 0.29 +2.3 356,920 - TX73_001710 0.31 -1.9 356,922 + TX73_001710 0.31 +1.9 356,922 + TX73_001710 0.31 +1.9 356,928 - TX73_001710 0.32 -0.1 356,930 + TX73_001710 0.32 +0.0 356,953 + TX73_001710 0.35 -2.0 356,953 + TX73_001710 0.35 +0.3 356,968 - TX73_001710 0.37 +3.1 356,988 - TX73_001710 0.40 -0.1 356,997 - TX73_001710 0.41 -1.6 357,015 - TX73_001710 0.44 +1.0 357,015 - TX73_001710 0.44 -0.6 357,015 - TX73_001710 0.44 +1.2 357,015 - TX73_001710 0.44 +2.3 357,020 - TX73_001710 0.45 -2.5 357,026 + TX73_001710 0.45 -0.5 357,026 + TX73_001710 0.45 +0.3 357,031 - TX73_001710 0.46 +0.7 357,035 + TX73_001710 0.47 -0.5 357,048 + TX73_001710 0.48 -0.6 357,056 - TX73_001710 0.50 +1.2 357,062 - TX73_001710 0.50 -1.8 357,064 - TX73_001710 0.51 +1.3 357,064 - TX73_001710 0.51 -0.7 357,064 - TX73_001710 0.51 -0.2 357,066 + TX73_001710 0.51 +0.3 357,071 + TX73_001710 0.52 -0.2 357,074 - TX73_001710 0.52 -0.4 357,074 - TX73_001710 0.52 -0.9 357,076 + TX73_001710 0.52 +0.4 357,091 + TX73_001710 0.54 -0.5 357,100 + TX73_001710 0.56 +1.4 357,109 + TX73_001710 0.57 -1.4 357,115 - TX73_001710 0.58 -1.0 357,117 - TX73_001710 0.58 -0.8 357,176 + TX73_001710 0.66 +1.2 357,199 + TX73_001710 0.70 -0.8 357,199 + TX73_001710 0.70 +2.5 357,199 + TX73_001710 0.70 -0.8 357,199 + TX73_001710 0.70 +1.0 357,199 + TX73_001710 0.70 +0.5 357,199 + TX73_001710 0.70 -0.3 357,199 + TX73_001710 0.70 +1.6 357,199 + TX73_001710 0.70 +0.3 357,199 + TX73_001710 0.70 +0.8 357,207 - TX73_001710 0.71 -0.1 357,207 - TX73_001710 0.71 +0.9 357,207 - TX73_001710 0.71 -0.4 357,207 - TX73_001710 0.71 +1.1 357,207 - TX73_001710 0.71 -0.1 357,210 - TX73_001710 0.71 +0.3 357,212 - TX73_001710 0.71 -1.1 357,244 + TX73_001710 0.76 +0.9 357,245 + TX73_001710 0.76 +1.4 357,251 + TX73_001710 0.77 +0.3 357,251 + TX73_001710 0.77 -1.9 357,253 - TX73_001710 0.77 -0.9 357,259 - TX73_001710 0.78 -0.8 357,259 - TX73_001710 0.78 -0.5 357,259 - TX73_001710 0.78 +1.1 357,267 - TX73_001710 0.79 -2.4 357,270 + TX73_001710 0.80 +0.9 357,283 + TX73_001710 0.81 -1.6 357,283 + TX73_001710 0.81 -1.7 357,289 + TX73_001710 0.82 +0.4 357,289 + TX73_001710 0.82 +1.4 357,289 + TX73_001710 0.82 +1.4 357,299 + TX73_001710 0.84 -0.5 357,299 + TX73_001710 0.84 -1.7 357,299 + TX73_001710 0.84 -1.4 357,301 + TX73_001710 0.84 -2.8 357,304 + TX73_001710 0.84 -1.6 357,304 + TX73_001710 0.84 +0.2 357,304 + TX73_001710 0.84 -0.1 357,304 + TX73_001710 0.84 -0.1 357,304 + TX73_001710 0.84 -3.1 357,304 + TX73_001710 0.84 +0.3 357,304 + TX73_001710 0.84 +0.1 357,311 - TX73_001710 0.85 +0.5 357,312 - TX73_001710 0.85 +1.2 357,312 - TX73_001710 0.85 +1.0 357,312 - TX73_001710 0.85 +0.5 357,312 - TX73_001710 0.85 +1.4 357,312 - TX73_001710 0.85 -0.6 357,312 - TX73_001710 0.85 +1.5 357,315 + TX73_001710 0.86 -0.2 357,325 + TX73_001710 0.87 -3.0 357,331 + TX73_001710 0.88 +0.5 357,332 + TX73_001710 0.88 -0.1 357,345 + -2.4 357,348 - +0.9 357,351 - +0.2 357,356 - -0.6 357,379 + -2.0 357,407 + -1.4 357,430 - +0.3 357,457 - -0.2 357,459 + +1.0 357,459 + -0.2 357,460 - -1.7 357,467 - +0.9 357,492 - -0.2 357,492 - +0.9 357,492 - -2.0 357,498 - -0.3 357,499 + -0.8 357,504 + -1.7 357,504 + +1.3 357,504 + +0.5 357,504 + -2.4 357,512 - -1.2 357,512 - -1.3 357,512 - +1.1 357,512 - -0.0 357,512 - +0.1 357,512 - -1.3 357,512 - -1.3 357,518 + -0.3 357,519 + +0.3 357,530 + -1.1 357,538 - +2.5 357,538 - -1.2 357,562 - -0.5 357,562 - +0.9 357,566 - +0.3 357,574 - -1.8 357,578 + +0.4 357,592 + -1.8 357,599 - +0.6 357,607 + -3.3 357,610 - +0.8 357,613 + +1.7 357,613 + -0.6 357,618 + -0.4 357,621 - -2.0 357,626 - -3.0 357,630 - +0.1
Or see this region's nucleotide sequence