Experiment: L-Lactate (C) with 10 mM Sodium Chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_023130 and TX73_023135 are separated by 13 nucleotides TX73_023135 and TX73_023140 are separated by 80 nucleotides TX73_023140 and TX73_023145 are separated by 81 nucleotides TX73_023145 and TX73_023150 are separated by 23 nucleotides TX73_023150 and TX73_023155 are separated by 24 nucleotides
TX73_023130: TX73_023130 - hypothetical protein, at 5,030,962 to 5,031,480
_023130
TX73_023135: TX73_023135 - cadmium ABC transporter ATPase, at 5,031,494 to 5,031,673
_023135
TX73_023140: TX73_023140 - recombinase RecQ, at 5,031,754 to 5,032,293
_023140
TX73_023145: TX73_023145 - rhodanese-like domain-containing protein, at 5,032,375 to 5,032,764
_023145
TX73_023150: TX73_023150 - isoprenylcysteine carboxylmethyltransferase family protein, at 5,032,788 to 5,033,264
_023150
TX73_023155: TX73_023155 - NAD(P)/FAD-dependent oxidoreductase, at 5,033,289 to 5,034,581
_023155
Position (kb)
5032
5033 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 5031.379 kb on + strand, within TX73_023130 at 5031.387 kb on - strand, within TX73_023130 at 5031.411 kb on + strand, within TX73_023130 at 5031.426 kb on + strand, within TX73_023130 at 5031.478 kb on - strand at 5031.538 kb on + strand, within TX73_023135 at 5031.552 kb on - strand, within TX73_023135 at 5031.569 kb on - strand, within TX73_023135 at 5031.569 kb on - strand, within TX73_023135 at 5031.578 kb on - strand, within TX73_023135 at 5031.588 kb on + strand, within TX73_023135 at 5031.588 kb on - strand, within TX73_023135 at 5031.626 kb on - strand, within TX73_023135 at 5031.676 kb on + strand at 5031.684 kb on - strand at 5031.696 kb on + strand at 5031.697 kb on + strand at 5031.697 kb on + strand at 5031.697 kb on + strand at 5031.710 kb on - strand at 5031.710 kb on - strand at 5031.737 kb on + strand at 5031.741 kb on - strand at 5031.745 kb on + strand at 5031.812 kb on - strand, within TX73_023140 at 5031.877 kb on + strand, within TX73_023140 at 5031.879 kb on + strand, within TX73_023140 at 5031.880 kb on - strand, within TX73_023140 at 5031.885 kb on - strand, within TX73_023140 at 5031.887 kb on + strand, within TX73_023140 at 5031.890 kb on - strand, within TX73_023140 at 5031.900 kb on + strand, within TX73_023140 at 5031.900 kb on + strand, within TX73_023140 at 5031.948 kb on + strand, within TX73_023140 at 5031.998 kb on + strand, within TX73_023140 at 5032.011 kb on + strand, within TX73_023140 at 5032.012 kb on + strand, within TX73_023140 at 5032.041 kb on - strand, within TX73_023140 at 5032.043 kb on - strand, within TX73_023140 at 5032.068 kb on - strand, within TX73_023140 at 5032.079 kb on - strand, within TX73_023140 at 5032.088 kb on - strand, within TX73_023140 at 5032.179 kb on + strand, within TX73_023140 at 5032.203 kb on + strand, within TX73_023140 at 5032.227 kb on + strand, within TX73_023140 at 5032.232 kb on + strand, within TX73_023140 at 5032.235 kb on - strand, within TX73_023140 at 5032.240 kb on + strand at 5032.334 kb on + strand at 5032.421 kb on + strand, within TX73_023145 at 5032.471 kb on + strand, within TX73_023145 at 5032.471 kb on + strand, within TX73_023145 at 5032.471 kb on + strand, within TX73_023145 at 5032.481 kb on + strand, within TX73_023145 at 5032.486 kb on + strand, within TX73_023145 at 5032.514 kb on - strand, within TX73_023145 at 5032.545 kb on + strand, within TX73_023145 at 5032.612 kb on - strand, within TX73_023145 at 5032.614 kb on - strand, within TX73_023145 at 5032.649 kb on - strand, within TX73_023145 at 5032.687 kb on + strand, within TX73_023145 at 5032.687 kb on - strand, within TX73_023145 at 5032.693 kb on - strand, within TX73_023145 at 5032.747 kb on - strand at 5032.757 kb on - strand at 5032.771 kb on + strand at 5032.772 kb on - strand at 5032.865 kb on - strand, within TX73_023150 at 5032.905 kb on + strand, within TX73_023150 at 5032.919 kb on + strand, within TX73_023150 at 5032.937 kb on - strand, within TX73_023150 at 5032.977 kb on - strand, within TX73_023150 at 5033.017 kb on - strand, within TX73_023150 at 5033.017 kb on - strand, within TX73_023150 at 5033.073 kb on + strand, within TX73_023150 at 5033.088 kb on + strand, within TX73_023150 at 5033.088 kb on + strand, within TX73_023150 at 5033.098 kb on + strand, within TX73_023150 at 5033.205 kb on + strand, within TX73_023150 at 5033.348 kb on - strand at 5033.383 kb on + strand at 5033.436 kb on + strand, within TX73_023155 at 5033.483 kb on - strand, within TX73_023155 at 5033.542 kb on + strand, within TX73_023155 at 5033.550 kb on - strand, within TX73_023155 at 5033.692 kb on - strand, within TX73_023155 at 5033.736 kb on - strand, within TX73_023155 at 5033.736 kb on - strand, within TX73_023155 at 5033.741 kb on - strand, within TX73_023155
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) with 10 mM Sodium Chloride remove 5,031,379 + TX73_023130 0.80 -1.5 5,031,387 - TX73_023130 0.82 +1.0 5,031,411 + TX73_023130 0.87 +0.8 5,031,426 + TX73_023130 0.89 +1.5 5,031,478 - -2.1 5,031,538 + TX73_023135 0.24 +0.8 5,031,552 - TX73_023135 0.32 -1.0 5,031,569 - TX73_023135 0.42 +1.1 5,031,569 - TX73_023135 0.42 -1.4 5,031,578 - TX73_023135 0.47 -1.6 5,031,588 + TX73_023135 0.52 +1.0 5,031,588 - TX73_023135 0.52 -2.3 5,031,626 - TX73_023135 0.73 +1.0 5,031,676 + +1.0 5,031,684 - +0.7 5,031,696 + +1.2 5,031,697 + +0.4 5,031,697 + -0.9 5,031,697 + +0.6 5,031,710 - -0.5 5,031,710 - -1.9 5,031,737 + +0.8 5,031,741 - +0.4 5,031,745 + +1.4 5,031,812 - TX73_023140 0.11 -1.2 5,031,877 + TX73_023140 0.23 +0.9 5,031,879 + TX73_023140 0.23 -1.6 5,031,880 - TX73_023140 0.23 -1.9 5,031,885 - TX73_023140 0.24 -1.4 5,031,887 + TX73_023140 0.25 +0.3 5,031,890 - TX73_023140 0.25 -1.5 5,031,900 + TX73_023140 0.27 +2.3 5,031,900 + TX73_023140 0.27 -1.6 5,031,948 + TX73_023140 0.36 -0.8 5,031,998 + TX73_023140 0.45 +1.0 5,032,011 + TX73_023140 0.48 -1.2 5,032,012 + TX73_023140 0.48 +0.1 5,032,041 - TX73_023140 0.53 -0.8 5,032,043 - TX73_023140 0.54 -0.4 5,032,068 - TX73_023140 0.58 -1.4 5,032,079 - TX73_023140 0.60 +3.4 5,032,088 - TX73_023140 0.62 +0.2 5,032,179 + TX73_023140 0.79 -3.9 5,032,203 + TX73_023140 0.83 +2.2 5,032,227 + TX73_023140 0.88 -1.2 5,032,232 + TX73_023140 0.89 +0.5 5,032,235 - TX73_023140 0.89 -3.0 5,032,240 + -1.4 5,032,334 + -0.4 5,032,421 + TX73_023145 0.12 -0.4 5,032,471 + TX73_023145 0.25 +3.3 5,032,471 + TX73_023145 0.25 -1.2 5,032,471 + TX73_023145 0.25 -2.3 5,032,481 + TX73_023145 0.27 -1.4 5,032,486 + TX73_023145 0.28 +0.7 5,032,514 - TX73_023145 0.36 +2.6 5,032,545 + TX73_023145 0.44 -1.6 5,032,612 - TX73_023145 0.61 +0.5 5,032,614 - TX73_023145 0.61 -1.7 5,032,649 - TX73_023145 0.70 +1.0 5,032,687 + TX73_023145 0.80 +2.9 5,032,687 - TX73_023145 0.80 +0.7 5,032,693 - TX73_023145 0.82 -1.7 5,032,747 - +1.7 5,032,757 - +1.6 5,032,771 + -2.5 5,032,772 - -1.8 5,032,865 - TX73_023150 0.16 -0.7 5,032,905 + TX73_023150 0.25 -0.5 5,032,919 + TX73_023150 0.27 +1.8 5,032,937 - TX73_023150 0.31 -1.5 5,032,977 - TX73_023150 0.40 -1.0 5,033,017 - TX73_023150 0.48 -2.3 5,033,017 - TX73_023150 0.48 -0.0 5,033,073 + TX73_023150 0.60 -1.7 5,033,088 + TX73_023150 0.63 +1.5 5,033,088 + TX73_023150 0.63 +1.6 5,033,098 + TX73_023150 0.65 +2.0 5,033,205 + TX73_023150 0.87 -2.8 5,033,348 - -2.5 5,033,383 + +0.3 5,033,436 + TX73_023155 0.11 +1.8 5,033,483 - TX73_023155 0.15 +1.0 5,033,542 + TX73_023155 0.20 -1.1 5,033,550 - TX73_023155 0.20 +1.0 5,033,692 - TX73_023155 0.31 +0.3 5,033,736 - TX73_023155 0.35 -2.1 5,033,736 - TX73_023155 0.35 +0.8 5,033,741 - TX73_023155 0.35 +0.5
Or see this region's nucleotide sequence