Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_022100

Experiment: L-Lactate (C) with 10 mM Sodium Chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C) with 10 mM Sodium Chloride
4,812,212	-		TX73_022095	0.54	+1.0
4,812,212	-		TX73_022095	0.54	+0.3
4,812,212	-		TX73_022095	0.54	+1.4
4,812,212	-		TX73_022095	0.54	+0.5
4,812,212	-		TX73_022095	0.54	+0.6
4,812,291	+		TX73_022095	0.58	-2.6
4,812,343	-		TX73_022095	0.61	+0.4
4,812,356	+		TX73_022095	0.62	+1.1
4,812,393	-		TX73_022095	0.64	+0.2
4,812,398	-		TX73_022095	0.64	+0.4
4,812,408	+		TX73_022095	0.65	+0.6
4,812,414	-		TX73_022095	0.65	+1.3
4,812,414	-		TX73_022095	0.65	+1.0
4,812,414	-		TX73_022095	0.65	+4.3
4,812,455	-		TX73_022095	0.68	+1.9
4,812,456	-		TX73_022095	0.68	+0.6
4,812,470	+		TX73_022095	0.68	-0.1
4,812,470	+		TX73_022095	0.68	+1.7
4,812,475	+		TX73_022095	0.69	-1.8
4,812,475	+		TX73_022095	0.69	-2.7
4,812,478	-		TX73_022095	0.69	+0.7
4,812,550	+		TX73_022095	0.73	+2.1
4,812,594	-		TX73_022095	0.75	-0.8
4,812,616	+		TX73_022095	0.77	+0.4
4,812,667	-		TX73_022095	0.79	-0.6
4,812,682	-		TX73_022095	0.80	+0.0
4,812,692	-		TX73_022095	0.81	+0.6
4,812,726	+		TX73_022095	0.83	-1.8
4,812,726	+		TX73_022095	0.83	-1.2
4,812,726	+		TX73_022095	0.83	-0.1
4,812,734	-		TX73_022095	0.83	-1.0
4,812,734	-		TX73_022095	0.83	+0.8
4,812,742	+		TX73_022095	0.83	+0.7
4,812,759	+		TX73_022095	0.84	-0.4
4,812,783	+		TX73_022095	0.86	+1.5
4,812,795	+		TX73_022095	0.86	-1.4
4,812,796	-		TX73_022095	0.86	+1.1
4,812,803	-		TX73_022095	0.87	-0.7
4,812,803	-		TX73_022095	0.87	-0.7
4,812,852	+		TX73_022095	0.90	+0.3
4,812,863	-				+0.9
4,812,878	+				+1.7
4,812,886	-				-1.6
4,812,886	-				+0.4
4,812,908	-				-0.7
4,812,978	+				-0.1
4,812,985	+				+1.8
4,812,985	+				-0.1
4,812,985	+				-0.1
4,812,985	+				+1.1
4,812,985	+				-0.2
4,812,985	+				-1.5
4,812,985	+				+1.4
4,812,986	-				+1.8
4,812,991	-				-2.2
4,812,993	-				-0.2
4,812,995	-				-3.7
4,813,019	-				+1.0
4,813,032	+				-1.0
4,813,040	-				+0.9
4,813,040	-				-0.0
4,813,040	-				+0.9
4,813,067	+				+1.1
4,813,075	-				+0.3
4,813,089	+				+1.3
4,813,092	-				+2.2
4,813,092	-				+1.4
4,813,092	-				-0.3
4,813,108	+				+2.1
4,813,111	-				-2.9
4,813,116	-				+0.5
4,813,116	-				+1.3
4,813,132	-				-1.6
4,813,132	-				-1.0
4,813,165	+				+1.1
4,813,223	+				-0.5
4,813,231	-				-0.4
4,813,247	+				+0.5
4,813,291	+				+2.5
4,813,346	+				+0.4
4,813,346	+				+1.4
4,813,408	+		TX73_022100	0.14	+1.5
4,813,415	-		TX73_022100	0.14	-0.2
4,813,436	-		TX73_022100	0.16	-1.6
4,813,487	+		TX73_022100	0.19	+0.9
4,813,490	-		TX73_022100	0.19	+2.1
4,813,495	-		TX73_022100	0.20	+1.4
4,813,549	+		TX73_022100	0.23	+1.4
4,813,551	+		TX73_022100	0.24	+0.4
4,813,596	-		TX73_022100	0.27	-1.7
4,813,597	-		TX73_022100	0.27	+0.4
4,813,597	-		TX73_022100	0.27	+1.1
4,813,623	+		TX73_022100	0.29	-0.6
4,813,650	-		TX73_022100	0.30	-1.6
4,813,665	-		TX73_022100	0.31	+1.1
4,813,676	+		TX73_022100	0.32	-0.7
4,813,680	+		TX73_022100	0.32	+1.8
4,813,689	-		TX73_022100	0.33	-0.7
4,813,741	-		TX73_022100	0.37	-1.8
4,813,793	-		TX73_022100	0.40	-0.5
4,813,880	+		TX73_022100	0.46	+3.0
4,813,885	+		TX73_022100	0.47	-1.9
4,813,898	+		TX73_022100	0.47	+0.5
4,813,898	+		TX73_022100	0.47	-1.3
4,813,917	+		TX73_022100	0.49	+0.2
4,813,932	-		TX73_022100	0.50	+0.2
4,813,962	-		TX73_022100	0.52	+1.3
4,813,983	-		TX73_022100	0.53	-0.1
4,813,984	+		TX73_022100	0.53	+1.2
4,813,992	-		TX73_022100	0.54	+2.2
4,814,008	-		TX73_022100	0.55	-0.9
4,814,040	-		TX73_022100	0.57	-1.7
4,814,058	-		TX73_022100	0.58	-0.6
4,814,091	+		TX73_022100	0.61	+3.0
4,814,096	+		TX73_022100	0.61	+2.4
4,814,132	+		TX73_022100	0.64	-1.3
4,814,140	-		TX73_022100	0.64	-0.2
4,814,176	+		TX73_022100	0.67	-0.5
4,814,229	-		TX73_022100	0.70	-0.6
4,814,266	+		TX73_022100	0.73	+1.6
4,814,266	+		TX73_022100	0.73	+2.7
4,814,266	+		TX73_022100	0.73	-0.4
4,814,266	+		TX73_022100	0.73	-1.6
4,814,266	+		TX73_022100	0.73	-0.6
4,814,266	+		TX73_022100	0.73	+0.4
4,814,266	+		TX73_022100	0.73	-0.4
4,814,267	+		TX73_022100	0.73	+0.1
4,814,269	-		TX73_022100	0.73	+1.5
4,814,274	-		TX73_022100	0.73	-2.0
4,814,274	-		TX73_022100	0.73	-1.9
4,814,274	-		TX73_022100	0.73	+0.7
4,814,274	-		TX73_022100	0.73	+0.8
4,814,274	-		TX73_022100	0.73	-1.5
4,814,274	-		TX73_022100	0.73	-0.5
4,814,274	-		TX73_022100	0.73	+0.7
4,814,274	-		TX73_022100	0.73	+1.7
4,814,279	-		TX73_022100	0.74	+0.4
4,814,279	-		TX73_022100	0.74	-0.4
4,814,292	+		TX73_022100	0.75	-1.3
4,814,300	-		TX73_022100	0.75	+1.8
4,814,300	-		TX73_022100	0.75	-1.5
4,814,300	-		TX73_022100	0.75	-2.1
4,814,312	+		TX73_022100	0.76	+2.0
4,814,383	+		TX73_022100	0.81	-0.5
4,814,402	-		TX73_022100	0.82	+2.4
4,814,403	+		TX73_022100	0.82	+0.3
4,814,411	-		TX73_022100	0.83	+1.3
4,814,411	-		TX73_022100	0.83	+0.9
4,814,439	+		TX73_022100	0.85	+2.8
4,814,447	-		TX73_022100	0.85	-1.7
4,814,512	-		TX73_022100	0.90	+0.1
4,814,527	+				-3.0
4,814,599	+				+2.8
4,814,674	-				+3.5
4,814,688	-				-0.8
4,814,707	+				+0.9
4,814,725	+				+0.3
4,814,725	+				-1.3
4,814,728	-				-1.2
4,814,731	-				+2.3
4,814,765	+				-1.0
4,814,765	+				+1.7
4,814,765	+				+0.1
4,814,765	+				+0.6
4,814,765	+				+0.2
4,814,773	-				+0.9
4,814,773	-				+0.7
4,814,773	-				-1.2
4,814,819	-				-0.2
4,814,835	-				-0.0
4,814,882	+				+0.4
4,814,942	+				-0.6
4,814,950	-				-1.3
4,814,955	-				-1.2
4,814,955	-				+0.2
4,814,970	+				+0.8
4,814,996	+				+0.3
4,815,054	+				-0.0
4,815,054	+				-1.5
4,815,054	+				-0.7
4,815,054	+				+0.3
4,815,054	+				+1.2
4,815,062	-				+0.3
4,815,062	-				-1.0
4,815,062	-				-0.2
4,815,062	-				-0.8
4,815,082	+				+1.2
4,815,116	-		TX73_022105	0.11	+0.9
4,815,131	+		TX73_022105	0.12	+1.6
4,815,131	+		TX73_022105	0.12	-0.5
4,815,139	-		TX73_022105	0.12	+0.1
4,815,141	+		TX73_022105	0.12	-2.1
4,815,143	+		TX73_022105	0.12	-1.2
4,815,146	-		TX73_022105	0.13	-0.1
4,815,149	-		TX73_022105	0.13	-0.9
4,815,151	-		TX73_022105	0.13	+0.9
4,815,198	-		TX73_022105	0.16	+1.3
4,815,241	-		TX73_022105	0.18	+0.6
4,815,241	-		TX73_022105	0.18	-0.0
4,815,259	-		TX73_022105	0.19	+2.0
4,815,273	-		TX73_022105	0.20	-0.6
4,815,278	+		TX73_022105	0.20	+1.2
4,815,336	+		TX73_022105	0.24	-2.2
4,815,360	+		TX73_022105	0.25	-2.0
4,815,368	-		TX73_022105	0.26	-0.6
4,815,407	+		TX73_022105	0.28	-1.8
4,815,409	-		TX73_022105	0.28	+0.2
4,815,409	-		TX73_022105	0.28	-1.6
4,815,415	-		TX73_022105	0.28	+0.3
4,815,476	+		TX73_022105	0.32	+1.6
4,815,482	+		TX73_022105	0.32	+1.6
4,815,503	-		TX73_022105	0.34	-1.1
4,815,545	-		TX73_022105	0.36	-0.6
4,815,545	-		TX73_022105	0.36	-2.7
4,815,587	+		TX73_022105	0.39	+0.1
4,815,587	+		TX73_022105	0.39	+0.3
4,815,603	+		TX73_022105	0.40	+1.0
4,815,613	-		TX73_022105	0.40	-0.8
4,815,613	-		TX73_022105	0.40	-0.3
4,815,660	+		TX73_022105	0.43	+0.2