Experiment: L-Lactate (C) with 10 mM Sodium Chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_010405 and TX73_010410 are separated by 10 nucleotides TX73_010410 and TX73_010415 overlap by 8 nucleotides TX73_010415 and TX73_010420 are separated by 25 nucleotides TX73_010420 and TX73_010425 are separated by 166 nucleotides
TX73_010405: TX73_010405 - beta-ketoacyl-ACP synthase, at 2,274,170 to 2,275,450
_010405
TX73_010410: TX73_010410 - beta-ketoacyl-ACP synthase, at 2,275,461 to 2,276,669
_010410
TX73_010415: TX73_010415 - beta-hydroxyacyl-ACP dehydratase, at 2,276,662 to 2,277,132
_010415
TX73_010420: TX73_010420 - acyl carrier protein, at 2,277,158 to 2,277,439
_010420
TX73_010425: TX73_010425 - hypothetical protein, at 2,277,606 to 2,277,959
_010425
Position (kb)
2275
2276
2277 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2275.479 kb on - strand at 2276.718 kb on - strand, within TX73_010415 at 2276.720 kb on - strand, within TX73_010415 at 2276.720 kb on - strand, within TX73_010415 at 2276.735 kb on - strand, within TX73_010415 at 2276.839 kb on - strand, within TX73_010415 at 2276.849 kb on - strand, within TX73_010415 at 2276.882 kb on - strand, within TX73_010415 at 2276.895 kb on - strand, within TX73_010415 at 2276.895 kb on - strand, within TX73_010415 at 2276.895 kb on - strand, within TX73_010415 at 2276.970 kb on - strand, within TX73_010415 at 2276.975 kb on + strand, within TX73_010415 at 2276.989 kb on - strand, within TX73_010415 at 2277.048 kb on - strand, within TX73_010415 at 2277.048 kb on - strand, within TX73_010415 at 2277.135 kb on - strand at 2277.540 kb on + strand at 2277.540 kb on + strand at 2277.540 kb on + strand at 2277.548 kb on - strand at 2277.581 kb on - strand at 2277.604 kb on + strand at 2277.614 kb on + strand at 2277.633 kb on + strand at 2277.636 kb on - strand at 2277.640 kb on + strand at 2277.657 kb on + strand, within TX73_010425 at 2277.657 kb on + strand, within TX73_010425 at 2277.657 kb on + strand, within TX73_010425 at 2277.657 kb on + strand, within TX73_010425 at 2277.665 kb on - strand, within TX73_010425
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) with 10 mM Sodium Chloride remove 2,275,479 - +1.8 2,276,718 - TX73_010415 0.12 +1.3 2,276,720 - TX73_010415 0.12 -0.7 2,276,720 - TX73_010415 0.12 +0.4 2,276,735 - TX73_010415 0.15 -0.8 2,276,839 - TX73_010415 0.38 +0.5 2,276,849 - TX73_010415 0.40 +1.3 2,276,882 - TX73_010415 0.47 +2.4 2,276,895 - TX73_010415 0.49 +0.8 2,276,895 - TX73_010415 0.49 -2.2 2,276,895 - TX73_010415 0.49 +2.6 2,276,970 - TX73_010415 0.65 -1.4 2,276,975 + TX73_010415 0.66 -0.4 2,276,989 - TX73_010415 0.69 +2.4 2,277,048 - TX73_010415 0.82 +0.1 2,277,048 - TX73_010415 0.82 +2.1 2,277,135 - +1.2 2,277,540 + -0.8 2,277,540 + +0.9 2,277,540 + -0.4 2,277,548 - +0.1 2,277,581 - -2.5 2,277,604 + +1.5 2,277,614 + +1.0 2,277,633 + -1.4 2,277,636 - -2.0 2,277,640 + -1.4 2,277,657 + TX73_010425 0.14 -0.8 2,277,657 + TX73_010425 0.14 -1.0 2,277,657 + TX73_010425 0.14 -1.2 2,277,657 + TX73_010425 0.14 -2.1 2,277,665 - TX73_010425 0.17 -0.2
Or see this region's nucleotide sequence