Experiment: L-Lactate (C) with 10 mM Sodium Chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_009260 and TX73_009265 are separated by 169 nucleotides TX73_009265 and TX73_009270 overlap by 113 nucleotides
TX73_009260: TX73_009260 - putative DNA modification/repair radical SAM protein, at 2,020,276 to 2,021,526
_009260
TX73_009265: TX73_009265 - DNA repair protein, at 2,021,696 to 2,022,481
_009265
TX73_009270: TX73_009270 - DNA polymerase Y family protein, at 2,022,369 to 2,023,970
_009270
Position (kb)
2021
2022
2023 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2020.720 kb on - strand, within TX73_009260 at 2020.800 kb on - strand, within TX73_009260 at 2020.801 kb on + strand, within TX73_009260 at 2021.078 kb on + strand, within TX73_009260 at 2021.097 kb on + strand, within TX73_009260 at 2021.163 kb on - strand, within TX73_009260 at 2021.165 kb on - strand, within TX73_009260 at 2021.197 kb on + strand, within TX73_009260 at 2021.207 kb on + strand, within TX73_009260 at 2021.255 kb on - strand, within TX73_009260 at 2021.324 kb on + strand, within TX73_009260 at 2021.325 kb on - strand, within TX73_009260 at 2021.345 kb on + strand, within TX73_009260 at 2021.350 kb on + strand, within TX73_009260 at 2021.353 kb on - strand, within TX73_009260 at 2021.353 kb on - strand, within TX73_009260 at 2021.355 kb on + strand, within TX73_009260 at 2021.411 kb on + strand at 2021.417 kb on - strand at 2021.423 kb on - strand at 2021.424 kb on - strand at 2021.434 kb on - strand at 2021.434 kb on - strand at 2021.439 kb on - strand at 2021.455 kb on + strand at 2021.456 kb on - strand at 2021.500 kb on + strand at 2021.581 kb on - strand at 2021.594 kb on - strand at 2021.602 kb on - strand at 2021.607 kb on - strand at 2021.687 kb on + strand at 2021.692 kb on + strand at 2021.734 kb on - strand at 2021.760 kb on + strand at 2021.796 kb on - strand, within TX73_009265 at 2021.813 kb on + strand, within TX73_009265 at 2021.823 kb on + strand, within TX73_009265 at 2021.823 kb on - strand, within TX73_009265 at 2021.823 kb on - strand, within TX73_009265 at 2021.829 kb on - strand, within TX73_009265 at 2021.830 kb on + strand, within TX73_009265 at 2021.838 kb on - strand, within TX73_009265 at 2021.854 kb on + strand, within TX73_009265 at 2021.986 kb on + strand, within TX73_009265 at 2022.016 kb on + strand, within TX73_009265 at 2022.021 kb on + strand, within TX73_009265 at 2022.024 kb on - strand, within TX73_009265 at 2022.037 kb on + strand, within TX73_009265 at 2022.082 kb on + strand, within TX73_009265 at 2022.082 kb on + strand, within TX73_009265 at 2022.082 kb on + strand, within TX73_009265 at 2022.090 kb on - strand, within TX73_009265 at 2022.134 kb on - strand, within TX73_009265 at 2022.153 kb on + strand, within TX73_009265 at 2022.171 kb on + strand, within TX73_009265 at 2022.226 kb on + strand, within TX73_009265 at 2022.229 kb on - strand, within TX73_009265 at 2022.234 kb on - strand, within TX73_009265 at 2022.234 kb on - strand, within TX73_009265 at 2022.286 kb on - strand, within TX73_009265 at 2022.291 kb on - strand, within TX73_009265 at 2022.309 kb on + strand, within TX73_009265 at 2022.309 kb on + strand, within TX73_009265 at 2022.397 kb on - strand at 2022.430 kb on - strand at 2022.430 kb on - strand at 2022.466 kb on - strand at 2022.484 kb on - strand at 2022.555 kb on + strand, within TX73_009270 at 2022.581 kb on - strand, within TX73_009270 at 2022.596 kb on - strand, within TX73_009270 at 2022.608 kb on + strand, within TX73_009270 at 2022.614 kb on - strand, within TX73_009270 at 2022.621 kb on - strand, within TX73_009270 at 2022.642 kb on - strand, within TX73_009270 at 2022.665 kb on + strand, within TX73_009270 at 2022.675 kb on + strand, within TX73_009270 at 2022.817 kb on + strand, within TX73_009270 at 2022.839 kb on + strand, within TX73_009270 at 2022.893 kb on - strand, within TX73_009270 at 2022.989 kb on + strand, within TX73_009270 at 2022.995 kb on - strand, within TX73_009270 at 2023.043 kb on + strand, within TX73_009270 at 2023.043 kb on + strand, within TX73_009270 at 2023.051 kb on - strand, within TX73_009270 at 2023.073 kb on - strand, within TX73_009270 at 2023.073 kb on - strand, within TX73_009270 at 2023.119 kb on + strand, within TX73_009270 at 2023.135 kb on - strand, within TX73_009270 at 2023.162 kb on + strand, within TX73_009270 at 2023.205 kb on + strand, within TX73_009270 at 2023.292 kb on - strand, within TX73_009270 at 2023.325 kb on + strand, within TX73_009270 at 2023.325 kb on + strand, within TX73_009270 at 2023.330 kb on + strand, within TX73_009270 at 2023.333 kb on - strand, within TX73_009270 at 2023.468 kb on - strand, within TX73_009270
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) with 10 mM Sodium Chloride remove 2,020,720 - TX73_009260 0.35 -0.2 2,020,800 - TX73_009260 0.42 -0.6 2,020,801 + TX73_009260 0.42 -1.3 2,021,078 + TX73_009260 0.64 -1.0 2,021,097 + TX73_009260 0.66 +1.0 2,021,163 - TX73_009260 0.71 -2.1 2,021,165 - TX73_009260 0.71 -1.1 2,021,197 + TX73_009260 0.74 +0.2 2,021,207 + TX73_009260 0.74 -1.4 2,021,255 - TX73_009260 0.78 +0.4 2,021,324 + TX73_009260 0.84 -1.0 2,021,325 - TX73_009260 0.84 -1.0 2,021,345 + TX73_009260 0.85 -1.0 2,021,350 + TX73_009260 0.86 +0.7 2,021,353 - TX73_009260 0.86 +0.1 2,021,353 - TX73_009260 0.86 -0.6 2,021,355 + TX73_009260 0.86 -1.4 2,021,411 + -1.3 2,021,417 - +0.5 2,021,423 - -0.7 2,021,424 - +0.7 2,021,434 - -0.5 2,021,434 - +0.9 2,021,439 - +0.8 2,021,455 + -0.6 2,021,456 - -1.0 2,021,500 + +1.7 2,021,581 - +0.4 2,021,594 - +1.8 2,021,602 - -2.5 2,021,607 - -0.1 2,021,687 + -1.0 2,021,692 + +0.3 2,021,734 - -2.1 2,021,760 + -0.0 2,021,796 - TX73_009265 0.13 +0.2 2,021,813 + TX73_009265 0.15 -0.6 2,021,823 + TX73_009265 0.16 -0.5 2,021,823 - TX73_009265 0.16 +0.6 2,021,823 - TX73_009265 0.16 -2.6 2,021,829 - TX73_009265 0.17 -0.2 2,021,830 + TX73_009265 0.17 -0.0 2,021,838 - TX73_009265 0.18 +2.5 2,021,854 + TX73_009265 0.20 -1.7 2,021,986 + TX73_009265 0.37 +0.2 2,022,016 + TX73_009265 0.41 -2.2 2,022,021 + TX73_009265 0.41 +0.1 2,022,024 - TX73_009265 0.42 -0.3 2,022,037 + TX73_009265 0.43 -1.0 2,022,082 + TX73_009265 0.49 +1.6 2,022,082 + TX73_009265 0.49 +0.5 2,022,082 + TX73_009265 0.49 +0.1 2,022,090 - TX73_009265 0.50 -1.8 2,022,134 - TX73_009265 0.56 -0.4 2,022,153 + TX73_009265 0.58 -1.0 2,022,171 + TX73_009265 0.60 -0.4 2,022,226 + TX73_009265 0.67 +1.3 2,022,229 - TX73_009265 0.68 -1.7 2,022,234 - TX73_009265 0.68 +1.4 2,022,234 - TX73_009265 0.68 -0.4 2,022,286 - TX73_009265 0.75 +0.7 2,022,291 - TX73_009265 0.76 -0.9 2,022,309 + TX73_009265 0.78 -1.2 2,022,309 + TX73_009265 0.78 +0.8 2,022,397 - +1.1 2,022,430 - +0.2 2,022,430 - +0.0 2,022,466 - +2.5 2,022,484 - -1.2 2,022,555 + TX73_009270 0.12 +0.7 2,022,581 - TX73_009270 0.13 -0.5 2,022,596 - TX73_009270 0.14 -0.0 2,022,608 + TX73_009270 0.15 +1.5 2,022,614 - TX73_009270 0.15 -0.7 2,022,621 - TX73_009270 0.16 +0.0 2,022,642 - TX73_009270 0.17 +2.0 2,022,665 + TX73_009270 0.18 -0.4 2,022,675 + TX73_009270 0.19 +1.2 2,022,817 + TX73_009270 0.28 +1.3 2,022,839 + TX73_009270 0.29 -0.5 2,022,893 - TX73_009270 0.33 +1.6 2,022,989 + TX73_009270 0.39 +1.7 2,022,995 - TX73_009270 0.39 +0.5 2,023,043 + TX73_009270 0.42 +1.8 2,023,043 + TX73_009270 0.42 -0.0 2,023,051 - TX73_009270 0.43 -1.5 2,023,073 - TX73_009270 0.44 -1.0 2,023,073 - TX73_009270 0.44 +0.7 2,023,119 + TX73_009270 0.47 +0.0 2,023,135 - TX73_009270 0.48 -2.4 2,023,162 + TX73_009270 0.50 -0.6 2,023,205 + TX73_009270 0.52 -0.5 2,023,292 - TX73_009270 0.58 -1.4 2,023,325 + TX73_009270 0.60 -2.0 2,023,325 + TX73_009270 0.60 +1.2 2,023,330 + TX73_009270 0.60 +0.6 2,023,333 - TX73_009270 0.60 -0.7 2,023,468 - TX73_009270 0.69 +2.5
Or see this region's nucleotide sequence