Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_008405

Experiment: L-Lactate (C) with 10 mM Sodium Chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C) with 10 mM Sodium Chloride
1,816,193	+		TX73_008395	0.64	+1.2
1,816,283	+		TX73_008395	0.85	-0.7
1,816,295	-		TX73_008395	0.88	-0.7
1,816,295	-		TX73_008395	0.88	-1.6
1,816,297	+		TX73_008395	0.88	-1.4
1,816,302	+		TX73_008395	0.90	+0.2
1,816,303	-		TX73_008395	0.90	-1.8
1,816,305	-				+0.8
1,816,310	-				+0.9
1,816,310	-				+2.7
1,816,310	-				-1.3
1,816,319	+				+0.5
1,816,320	-				-1.2
1,816,327	-				+1.4
1,816,327	-				+0.6
1,816,328	+				+1.5
1,816,328	+				-1.4
1,816,328	+				-1.6
1,816,340	+				-2.0
1,816,340	+				-0.3
1,816,359	-				-0.2
1,816,380	-				+0.8
1,816,406	+				-1.1
1,816,414	-				+0.5
1,816,414	-				-1.6
1,816,414	-				-3.1
1,816,414	-				+0.4
1,816,417	+				-0.3
1,816,417	+				-0.2
1,816,417	+				-1.4
1,816,425	-				-1.6
1,816,429	+				-0.7
1,816,430	-				-1.4
1,816,451	+				+1.5
1,816,459	-				+1.5
1,816,461	+				-1.1
1,816,480	+				+0.0
1,816,504	+				+1.1
1,816,504	+				+1.6
1,816,504	+				-1.3
1,816,509	+				-2.0
1,816,512	-				-2.1
1,816,515	+				-1.8
1,816,570	-				-1.0
1,816,573	+				-0.0
1,816,583	-		TX73_008400	0.11	+0.4
1,816,624	-		TX73_008400	0.18	+0.2
1,816,629	-		TX73_008400	0.19	+0.2
1,816,694	+		TX73_008400	0.31	+1.6
1,816,699	+		TX73_008400	0.32	-1.4
1,816,704	+		TX73_008400	0.33	+0.7
1,816,704	+		TX73_008400	0.33	-1.5
1,816,704	+		TX73_008400	0.33	+1.5
1,816,712	-		TX73_008400	0.34	-0.7
1,816,741	+		TX73_008400	0.40	+1.4
1,816,749	-		TX73_008400	0.41	+0.2
1,816,751	-		TX73_008400	0.42	+1.6
1,816,802	+		TX73_008400	0.51	+0.9
1,816,810	-		TX73_008400	0.52	-0.4
1,816,820	-		TX73_008400	0.54	-0.4
1,816,895	-		TX73_008400	0.68	-0.6
1,816,903	-		TX73_008400	0.69	+1.6
1,816,915	+		TX73_008400	0.71	-0.6
1,816,935	+		TX73_008400	0.75	+1.4
1,816,957	-		TX73_008400	0.79	-0.9
1,816,961	+		TX73_008400	0.80	+0.5
1,816,969	-		TX73_008400	0.81	+0.7
1,816,969	-		TX73_008400	0.81	+1.5
1,816,969	-		TX73_008400	0.81	+1.4
1,816,978	+		TX73_008400	0.83	+0.9
1,816,981	-		TX73_008400	0.83	-0.9
1,816,997	+		TX73_008400	0.86	+0.3
1,816,998	-		TX73_008400	0.87	-1.5
1,817,019	-				-0.0
1,817,021	+				+0.2
1,817,045	+				-0.0
1,817,045	+				-0.2
1,817,055	+				+0.3
1,817,063	-				-2.8
1,817,063	-				-1.0
1,817,063	-				+0.4
1,817,065	+				-3.2
1,817,065	+				-1.8
1,817,073	+				-3.1
1,817,079	+				-0.4
1,817,088	-				+0.8
1,817,095	-				+0.4
1,817,118	+				-1.4
1,817,118	+				+0.5
1,817,150	-				-0.0
1,817,183	-		TX73_008405	0.12	+1.1
1,817,190	+		TX73_008405	0.13	-1.6
1,817,190	+		TX73_008405	0.13	+1.7
1,817,198	-		TX73_008405	0.13	-2.4
1,817,198	-		TX73_008405	0.13	-0.1
1,817,213	-		TX73_008405	0.15	+1.3
1,817,241	+		TX73_008405	0.18	-0.4
1,817,241	+		TX73_008405	0.18	+2.3
1,817,266	-		TX73_008405	0.21	-0.9
1,817,271	+		TX73_008405	0.21	+3.1
1,817,279	-		TX73_008405	0.22	+1.3
1,817,279	-		TX73_008405	0.22	+1.8
1,817,321	-		TX73_008405	0.26	+1.7
1,817,439	-		TX73_008405	0.39	-1.4
1,817,441	+		TX73_008405	0.39	+0.4
1,817,458	+		TX73_008405	0.41	+2.4
1,817,505	+		TX73_008405	0.46	+1.2
1,817,516	-		TX73_008405	0.47	+1.4
1,817,538	-		TX73_008405	0.49	-0.0
1,817,546	-		TX73_008405	0.50	-1.1
1,817,576	+		TX73_008405	0.53	-0.3
1,817,582	-		TX73_008405	0.54	+0.0
1,817,590	-		TX73_008405	0.55	+1.3
1,817,634	+		TX73_008405	0.59	-1.0
1,817,649	+		TX73_008405	0.61	-0.2
1,817,657	-		TX73_008405	0.62	+0.7
1,817,662	+		TX73_008405	0.62	+2.2
1,817,674	-		TX73_008405	0.64	+2.7
1,817,680	+		TX73_008405	0.64	+1.2
1,817,688	-		TX73_008405	0.65	+0.6
1,817,694	-		TX73_008405	0.66	-1.3
1,817,726	-		TX73_008405	0.69	-0.7
1,817,728	-		TX73_008405	0.69	+1.2
1,817,758	+		TX73_008405	0.72	-1.3
1,817,758	+		TX73_008405	0.72	+1.3
1,817,765	+		TX73_008405	0.73	-2.4
1,817,765	+		TX73_008405	0.73	-0.2
1,817,765	+		TX73_008405	0.73	-1.5
1,817,766	-		TX73_008405	0.73	+2.0
1,817,773	-		TX73_008405	0.74	-0.1
1,817,773	-		TX73_008405	0.74	-0.2
1,817,773	-		TX73_008405	0.74	+1.6
1,817,786	+		TX73_008405	0.75	+0.2
1,817,801	+		TX73_008405	0.77	-0.6
1,817,854	-		TX73_008405	0.83	+0.1
1,817,859	-		TX73_008405	0.83	-0.6
1,817,866	-		TX73_008405	0.84	-0.3
1,817,899	-		TX73_008405	0.87	-0.7
1,817,950	+				-1.2
1,817,960	+				+1.3
1,817,960	+				+1.5
1,817,961	-				-2.5
1,817,968	-				+0.7
1,817,968	-				-0.1
1,817,978	-				-0.8
1,817,994	+				-0.4
1,818,018	-				-1.7
1,818,057	-				+0.9
1,818,078	+				-1.6
1,818,128	-				+0.2
1,818,134	+				-1.0
1,818,147	-				-1.8
1,818,150	+				+1.5
1,818,152	-				-2.2
1,818,158	-				-0.8
1,818,176	+				+1.1
1,818,176	+				-2.5
1,818,179	-				+2.0
1,818,184	-				+1.0
1,818,205	+				+2.2
1,818,213	-				-0.1
1,818,215	+				+2.8
1,818,232	+				+0.3
1,818,265	+		TX73_008410	0.24	+0.7
1,818,283	-		TX73_008410	0.33	-0.4
1,818,283	-		TX73_008410	0.33	+0.1
1,818,288	+		TX73_008410	0.36	+0.7
1,818,297	-		TX73_008410	0.40	-0.2
1,818,325	-		TX73_008410	0.54	+0.6
1,818,351	+		TX73_008410	0.67	-0.0
1,818,370	+		TX73_008410	0.77	-1.9
1,818,370	+		TX73_008410	0.77	+0.7
1,818,370	-		TX73_008410	0.77	-0.6
1,818,380	-		TX73_008410	0.82	-1.0
1,818,384	+		TX73_008410	0.84	+0.3
1,818,396	+		TX73_008410	0.90	-1.7
1,818,402	-				+1.2
1,818,402	-				+2.2
1,818,405	-				+0.3
1,818,409	-				-0.7
1,818,423	+				-0.3
1,818,435	+				-0.4
1,818,445	-				+0.0
1,818,500	+				+2.2
1,818,512	+				-0.2
1,818,540	-				-0.5
1,818,541	+				-0.1
1,818,622	+				-0.6
1,818,649	+				-1.9
1,818,652	+				-1.4
1,818,657	-				-0.3
1,818,670	+				-2.4
1,818,678	-				-0.6
1,818,686	-				+1.2
1,818,692	-				-0.9
1,818,746	+				-0.6
1,818,747	-				+0.1
1,818,747	-				-0.1
1,818,753	-				-1.2
1,818,764	+				+0.3
1,818,764	+				+1.4
1,818,782	+				+1.7
1,818,804	+				+1.1
1,818,809	-				-0.3
1,818,819	-				+0.7
1,818,819	-				-0.4
1,818,871	+				+1.8
1,818,876	+				+1.1
1,818,891	-				+1.2
1,818,891	-				+1.6
1,818,953	-				+0.4
1,818,960	+				-0.1
1,818,973	+		TX73_008415	0.10	-0.9
1,818,974	-		TX73_008415	0.10	+0.8
1,818,976	-		TX73_008415	0.10	-0.4
1,818,981	-		TX73_008415	0.10	-0.9
1,818,981	-		TX73_008415	0.10	+1.3
1,818,987	-		TX73_008415	0.11	-0.7
1,819,006	+		TX73_008415	0.12	+2.1
1,819,014	-		TX73_008415	0.12	+1.3