Experiment: L-Lactate (C) with 10 mM Sodium Chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_002745 and TX73_002750 are separated by 281 nucleotides TX73_002750 and TX73_002755 are separated by 182 nucleotides TX73_002755 and TX73_002760 are separated by 76 nucleotides
TX73_002745: TX73_002745 - polyhydroxyalkanoate synthesis repressor PhaR, at 590,023 to 590,613
_002745
TX73_002750: TX73_002750 - acetyl-CoA C-acetyltransferase, at 590,895 to 592,073
_002750
TX73_002755: TX73_002755 - beta-ketoacyl-ACP reductase, at 592,256 to 592,981
_002755
TX73_002760: TX73_002760 - EamA family transporter, at 593,058 to 593,924
_002760
Position (kb) 590
591
592
593 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 589.896 kb on + strand at 589.904 kb on - strand at 589.904 kb on - strand at 589.909 kb on + strand at 589.909 kb on + strand at 589.947 kb on + strand at 589.952 kb on - strand at 589.955 kb on - strand at 589.965 kb on - strand at 589.974 kb on + strand at 589.974 kb on + strand at 589.974 kb on + strand at 589.982 kb on - strand at 589.992 kb on - strand at 590.000 kb on + strand at 590.007 kb on + strand at 590.048 kb on + strand at 590.051 kb on - strand at 590.107 kb on - strand, within TX73_002745 at 590.133 kb on - strand, within TX73_002745 at 590.136 kb on + strand, within TX73_002745 at 590.222 kb on + strand, within TX73_002745 at 590.230 kb on - strand, within TX73_002745 at 590.230 kb on - strand, within TX73_002745 at 590.250 kb on + strand, within TX73_002745 at 590.252 kb on - strand, within TX73_002745 at 590.334 kb on - strand, within TX73_002745 at 590.376 kb on + strand, within TX73_002745 at 590.381 kb on - strand, within TX73_002745 at 590.399 kb on - strand, within TX73_002745 at 590.413 kb on + strand, within TX73_002745 at 590.416 kb on - strand, within TX73_002745 at 590.416 kb on - strand, within TX73_002745 at 590.426 kb on + strand, within TX73_002745 at 590.432 kb on + strand, within TX73_002745 at 590.434 kb on - strand, within TX73_002745 at 590.451 kb on + strand, within TX73_002745 at 590.468 kb on + strand, within TX73_002745 at 590.491 kb on - strand, within TX73_002745 at 590.509 kb on - strand, within TX73_002745 at 590.529 kb on - strand, within TX73_002745 at 590.540 kb on + strand, within TX73_002745 at 590.543 kb on - strand, within TX73_002745 at 590.553 kb on - strand, within TX73_002745 at 590.554 kb on + strand, within TX73_002745 at 590.554 kb on + strand, within TX73_002745 at 590.554 kb on + strand, within TX73_002745 at 590.554 kb on + strand, within TX73_002745 at 590.554 kb on + strand, within TX73_002745 at 590.562 kb on - strand at 590.562 kb on - strand at 590.562 kb on - strand at 590.562 kb on - strand at 590.562 kb on - strand at 590.562 kb on - strand at 590.562 kb on - strand at 590.630 kb on - strand at 590.632 kb on + strand at 590.633 kb on - strand at 590.735 kb on + strand at 590.740 kb on + strand at 590.740 kb on + strand at 590.842 kb on + strand at 590.844 kb on - strand at 590.855 kb on + strand at 590.861 kb on - strand at 590.863 kb on - strand at 590.863 kb on - strand at 590.863 kb on - strand at 590.885 kb on + strand at 590.888 kb on - strand at 590.888 kb on - strand at 590.888 kb on - strand at 590.910 kb on + strand at 590.923 kb on - strand at 591.004 kb on - strand at 591.011 kb on + strand at 591.038 kb on + strand, within TX73_002750 at 591.040 kb on + strand, within TX73_002750 at 591.046 kb on - strand, within TX73_002750 at 591.123 kb on + strand, within TX73_002750 at 591.143 kb on + strand, within TX73_002750 at 591.163 kb on + strand, within TX73_002750 at 591.180 kb on + strand, within TX73_002750 at 591.184 kb on + strand, within TX73_002750 at 591.196 kb on - strand, within TX73_002750 at 591.209 kb on - strand, within TX73_002750 at 591.215 kb on + strand, within TX73_002750 at 591.254 kb on - strand, within TX73_002750 at 591.259 kb on - strand, within TX73_002750 at 591.319 kb on - strand, within TX73_002750 at 591.323 kb on + strand, within TX73_002750 at 591.323 kb on + strand, within TX73_002750 at 591.331 kb on - strand, within TX73_002750 at 591.331 kb on - strand, within TX73_002750 at 591.331 kb on - strand, within TX73_002750 at 591.342 kb on - strand, within TX73_002750 at 591.347 kb on + strand, within TX73_002750 at 591.353 kb on - strand, within TX73_002750 at 591.354 kb on + strand, within TX73_002750 at 591.355 kb on - strand, within TX73_002750 at 591.355 kb on - strand, within TX73_002750 at 591.373 kb on - strand, within TX73_002750 at 591.419 kb on + strand, within TX73_002750 at 591.444 kb on - strand, within TX73_002750 at 591.449 kb on + strand, within TX73_002750 at 591.449 kb on + strand, within TX73_002750 at 591.451 kb on - strand, within TX73_002750 at 591.484 kb on - strand, within TX73_002750 at 591.504 kb on + strand, within TX73_002750 at 591.520 kb on - strand, within TX73_002750 at 591.571 kb on + strand, within TX73_002750 at 591.584 kb on + strand, within TX73_002750 at 591.625 kb on + strand, within TX73_002750 at 591.660 kb on + strand, within TX73_002750 at 591.671 kb on - strand, within TX73_002750 at 591.710 kb on + strand, within TX73_002750 at 591.718 kb on - strand, within TX73_002750 at 591.718 kb on - strand, within TX73_002750 at 591.732 kb on - strand, within TX73_002750 at 591.742 kb on - strand, within TX73_002750 at 591.742 kb on - strand, within TX73_002750 at 591.742 kb on - strand, within TX73_002750 at 591.760 kb on + strand, within TX73_002750 at 591.765 kb on + strand, within TX73_002750 at 591.765 kb on + strand, within TX73_002750 at 591.765 kb on + strand, within TX73_002750 at 591.789 kb on + strand, within TX73_002750 at 591.794 kb on + strand, within TX73_002750 at 591.794 kb on + strand, within TX73_002750 at 591.797 kb on - strand, within TX73_002750 at 591.802 kb on - strand, within TX73_002750 at 591.802 kb on - strand, within TX73_002750 at 591.820 kb on + strand, within TX73_002750 at 591.820 kb on + strand, within TX73_002750 at 591.825 kb on + strand, within TX73_002750 at 591.828 kb on - strand, within TX73_002750 at 591.828 kb on - strand, within TX73_002750 at 591.848 kb on - strand, within TX73_002750 at 591.855 kb on + strand, within TX73_002750 at 591.860 kb on + strand, within TX73_002750 at 591.863 kb on - strand, within TX73_002750 at 591.863 kb on - strand, within TX73_002750 at 591.863 kb on - strand, within TX73_002750 at 591.868 kb on - strand, within TX73_002750 at 591.868 kb on - strand, within TX73_002750 at 591.868 kb on - strand, within TX73_002750 at 591.895 kb on + strand, within TX73_002750 at 591.903 kb on - strand, within TX73_002750 at 591.944 kb on - strand, within TX73_002750 at 591.946 kb on - strand, within TX73_002750 at 591.957 kb on - strand at 591.964 kb on + strand at 591.967 kb on + strand at 591.980 kb on + strand at 591.987 kb on + strand at 591.987 kb on + strand at 591.987 kb on + strand at 592.027 kb on + strand at 592.038 kb on + strand at 592.046 kb on - strand at 592.046 kb on - strand at 592.053 kb on - strand at 592.053 kb on - strand at 592.058 kb on - strand at 592.075 kb on - strand at 592.079 kb on + strand at 592.092 kb on + strand at 592.111 kb on + strand at 592.178 kb on + strand at 592.246 kb on + strand at 592.316 kb on + strand at 592.326 kb on - strand at 592.358 kb on + strand, within TX73_002755 at 592.363 kb on + strand, within TX73_002755 at 592.474 kb on - strand, within TX73_002755 at 592.549 kb on + strand, within TX73_002755 at 592.559 kb on - strand, within TX73_002755 at 592.590 kb on + strand, within TX73_002755 at 592.664 kb on + strand, within TX73_002755 at 592.681 kb on - strand, within TX73_002755 at 592.767 kb on + strand, within TX73_002755 at 592.795 kb on - strand, within TX73_002755 at 592.807 kb on + strand, within TX73_002755 at 592.813 kb on + strand, within TX73_002755 at 592.815 kb on - strand, within TX73_002755 at 592.834 kb on + strand, within TX73_002755 at 592.878 kb on + strand, within TX73_002755 at 592.888 kb on - strand, within TX73_002755 at 592.888 kb on - strand, within TX73_002755 at 592.904 kb on + strand, within TX73_002755 at 592.914 kb on - strand at 592.940 kb on + strand at 592.941 kb on - strand at 592.949 kb on - strand at 592.949 kb on - strand at 592.949 kb on - strand at 592.949 kb on - strand at 592.976 kb on + strand at 593.029 kb on + strand at 593.050 kb on - strand at 593.055 kb on + strand at 593.063 kb on - strand at 593.069 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) with 10 mM Sodium Chloride remove 589,896 + -1.3 589,904 - -2.2 589,904 - -1.4 589,909 + -0.4 589,909 + -1.5 589,947 + -0.4 589,952 - +1.2 589,955 - +1.4 589,965 - +1.0 589,974 + -0.3 589,974 + +0.9 589,974 + +0.6 589,982 - +1.6 589,992 - -0.4 590,000 + -0.1 590,007 + -1.0 590,048 + -1.0 590,051 - +0.2 590,107 - TX73_002745 0.14 -2.8 590,133 - TX73_002745 0.19 -1.5 590,136 + TX73_002745 0.19 -2.7 590,222 + TX73_002745 0.34 -2.8 590,230 - TX73_002745 0.35 -2.6 590,230 - TX73_002745 0.35 -1.6 590,250 + TX73_002745 0.38 -2.5 590,252 - TX73_002745 0.39 -1.0 590,334 - TX73_002745 0.53 -1.4 590,376 + TX73_002745 0.60 +0.2 590,381 - TX73_002745 0.61 -1.3 590,399 - TX73_002745 0.64 -0.8 590,413 + TX73_002745 0.66 -1.2 590,416 - TX73_002745 0.66 -2.6 590,416 - TX73_002745 0.66 -1.8 590,426 + TX73_002745 0.68 -1.7 590,432 + TX73_002745 0.69 -1.7 590,434 - TX73_002745 0.70 -2.1 590,451 + TX73_002745 0.72 -1.7 590,468 + TX73_002745 0.75 -2.1 590,491 - TX73_002745 0.79 -1.3 590,509 - TX73_002745 0.82 -0.4 590,529 - TX73_002745 0.86 -1.9 590,540 + TX73_002745 0.87 -1.8 590,543 - TX73_002745 0.88 -0.8 590,553 - TX73_002745 0.90 -1.5 590,554 + TX73_002745 0.90 -0.3 590,554 + TX73_002745 0.90 -1.3 590,554 + TX73_002745 0.90 -2.5 590,554 + TX73_002745 0.90 -2.1 590,554 + TX73_002745 0.90 -1.1 590,562 - -0.0 590,562 - -1.6 590,562 - -2.3 590,562 - -0.9 590,562 - -2.9 590,562 - -1.3 590,562 - -3.2 590,630 - -3.3 590,632 + -0.7 590,633 - +0.7 590,735 + -1.1 590,740 + +1.2 590,740 + +2.4 590,842 + +0.5 590,844 - +2.0 590,855 + +1.7 590,861 - -0.0 590,863 - -1.0 590,863 - -1.2 590,863 - -0.6 590,885 + +1.3 590,888 - -2.5 590,888 - +0.7 590,888 - -0.7 590,910 + +2.1 590,923 - -1.8 591,004 - +0.1 591,011 + -1.9 591,038 + TX73_002750 0.12 +0.2 591,040 + TX73_002750 0.12 +0.5 591,046 - TX73_002750 0.13 -1.5 591,123 + TX73_002750 0.19 +1.3 591,143 + TX73_002750 0.21 +0.5 591,163 + TX73_002750 0.23 +3.5 591,180 + TX73_002750 0.24 -0.1 591,184 + TX73_002750 0.25 -0.7 591,196 - TX73_002750 0.26 +0.1 591,209 - TX73_002750 0.27 -1.6 591,215 + TX73_002750 0.27 -0.4 591,254 - TX73_002750 0.30 -2.1 591,259 - TX73_002750 0.31 -1.7 591,319 - TX73_002750 0.36 -0.3 591,323 + TX73_002750 0.36 -1.8 591,323 + TX73_002750 0.36 -1.0 591,331 - TX73_002750 0.37 -0.1 591,331 - TX73_002750 0.37 +0.3 591,331 - TX73_002750 0.37 -1.7 591,342 - TX73_002750 0.38 +0.5 591,347 + TX73_002750 0.38 -0.2 591,353 - TX73_002750 0.39 -0.4 591,354 + TX73_002750 0.39 +0.9 591,355 - TX73_002750 0.39 -0.3 591,355 - TX73_002750 0.39 -0.5 591,373 - TX73_002750 0.41 -1.2 591,419 + TX73_002750 0.44 -1.9 591,444 - TX73_002750 0.47 +0.5 591,449 + TX73_002750 0.47 -0.7 591,449 + TX73_002750 0.47 -2.1 591,451 - TX73_002750 0.47 -0.7 591,484 - TX73_002750 0.50 -1.6 591,504 + TX73_002750 0.52 -1.5 591,520 - TX73_002750 0.53 +0.5 591,571 + TX73_002750 0.57 -0.6 591,584 + TX73_002750 0.58 -1.3 591,625 + TX73_002750 0.62 +0.0 591,660 + TX73_002750 0.65 +0.6 591,671 - TX73_002750 0.66 +1.1 591,710 + TX73_002750 0.69 +1.4 591,718 - TX73_002750 0.70 -1.1 591,718 - TX73_002750 0.70 -0.2 591,732 - TX73_002750 0.71 -0.5 591,742 - TX73_002750 0.72 -4.2 591,742 - TX73_002750 0.72 -1.2 591,742 - TX73_002750 0.72 +2.1 591,760 + TX73_002750 0.73 -1.5 591,765 + TX73_002750 0.74 +0.0 591,765 + TX73_002750 0.74 -1.2 591,765 + TX73_002750 0.74 -0.8 591,789 + TX73_002750 0.76 -1.7 591,794 + TX73_002750 0.76 -0.7 591,794 + TX73_002750 0.76 +1.5 591,797 - TX73_002750 0.77 -1.1 591,802 - TX73_002750 0.77 +0.1 591,802 - TX73_002750 0.77 +0.3 591,820 + TX73_002750 0.78 +0.9 591,820 + TX73_002750 0.78 -0.6 591,825 + TX73_002750 0.79 +0.6 591,828 - TX73_002750 0.79 +1.2 591,828 - TX73_002750 0.79 +0.5 591,848 - TX73_002750 0.81 +1.8 591,855 + TX73_002750 0.81 -0.5 591,860 + TX73_002750 0.82 -0.7 591,863 - TX73_002750 0.82 -1.1 591,863 - TX73_002750 0.82 +0.3 591,863 - TX73_002750 0.82 +1.2 591,868 - TX73_002750 0.83 -1.0 591,868 - TX73_002750 0.83 -3.5 591,868 - TX73_002750 0.83 +0.1 591,895 + TX73_002750 0.85 -1.4 591,903 - TX73_002750 0.85 +0.6 591,944 - TX73_002750 0.89 -0.1 591,946 - TX73_002750 0.89 -0.4 591,957 - +1.1 591,964 + -1.4 591,967 + +0.7 591,980 + -0.2 591,987 + -3.0 591,987 + -0.8 591,987 + -0.9 592,027 + -1.1 592,038 + -0.8 592,046 - -0.7 592,046 - +0.6 592,053 - -0.8 592,053 - -0.9 592,058 - -2.8 592,075 - -0.7 592,079 + -1.7 592,092 + +1.3 592,111 + -1.6 592,178 + +0.8 592,246 + +0.5 592,316 + -0.0 592,326 - -1.8 592,358 + TX73_002755 0.14 +0.6 592,363 + TX73_002755 0.15 +0.2 592,474 - TX73_002755 0.30 -0.2 592,549 + TX73_002755 0.40 +0.1 592,559 - TX73_002755 0.42 -1.2 592,590 + TX73_002755 0.46 -0.0 592,664 + TX73_002755 0.56 -1.5 592,681 - TX73_002755 0.59 -1.1 592,767 + TX73_002755 0.70 -0.0 592,795 - TX73_002755 0.74 -0.6 592,807 + TX73_002755 0.76 -1.7 592,813 + TX73_002755 0.77 +1.9 592,815 - TX73_002755 0.77 -1.0 592,834 + TX73_002755 0.80 +0.7 592,878 + TX73_002755 0.86 -0.8 592,888 - TX73_002755 0.87 -1.2 592,888 - TX73_002755 0.87 -2.1 592,904 + TX73_002755 0.89 -2.0 592,914 - -1.7 592,940 + +1.1 592,941 - -1.3 592,949 - +0.6 592,949 - +2.7 592,949 - +0.2 592,949 - -0.8 592,976 + +0.9 593,029 + +0.6 593,050 - +1.5 593,055 + +1.0 593,063 - -1.2 593,069 - +0.0
Or see this region's nucleotide sequence