Experiment: L-Lactate (C) with 10 mM Sodium Chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_002415 and TX73_002420 are separated by 2 nucleotides TX73_002420 and TX73_002425 overlap by 1 nucleotides TX73_002425 and TX73_002430 overlap by 4 nucleotides TX73_002430 and TX73_002435 are separated by 8 nucleotides
TX73_002415: TX73_002415 - AprI/Inh family metalloprotease inhibitor, at 514,701 to 515,384
_002415
TX73_002420: TX73_002420 - 2-hydroxyacid dehydrogenase, at 515,387 to 516,373
_002420
TX73_002425: TX73_002425 - ABC transporter permease, at 516,373 to 517,197
_002425
TX73_002430: TX73_002430 - ABC transporter ATP-binding protein, at 517,194 to 518,024
_002430
TX73_002435: TX73_002435 - ABC transporter substrate-binding protein, at 518,033 to 519,175
_002435
Position (kb) 516
517
518 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 515.414 kb on - strand at 515.477 kb on - strand at 515.524 kb on + strand, within TX73_002420 at 515.537 kb on - strand, within TX73_002420 at 515.624 kb on + strand, within TX73_002420 at 515.691 kb on - strand, within TX73_002420 at 515.749 kb on + strand, within TX73_002420 at 515.756 kb on + strand, within TX73_002420 at 515.765 kb on - strand, within TX73_002420 at 515.774 kb on - strand, within TX73_002420 at 515.785 kb on + strand, within TX73_002420 at 515.785 kb on + strand, within TX73_002420 at 515.793 kb on - strand, within TX73_002420 at 515.828 kb on - strand, within TX73_002420 at 515.831 kb on + strand, within TX73_002420 at 515.893 kb on - strand, within TX73_002420 at 515.953 kb on + strand, within TX73_002420 at 515.965 kb on + strand, within TX73_002420 at 516.091 kb on + strand, within TX73_002420 at 516.094 kb on - strand, within TX73_002420 at 516.096 kb on + strand, within TX73_002420 at 516.101 kb on + strand, within TX73_002420 at 516.104 kb on - strand, within TX73_002420 at 516.116 kb on + strand, within TX73_002420 at 516.124 kb on - strand, within TX73_002420 at 516.152 kb on - strand, within TX73_002420 at 516.172 kb on - strand, within TX73_002420 at 516.180 kb on - strand, within TX73_002420 at 516.180 kb on - strand, within TX73_002420 at 516.185 kb on - strand, within TX73_002420 at 516.187 kb on + strand, within TX73_002420 at 516.190 kb on - strand, within TX73_002420 at 516.194 kb on + strand, within TX73_002420 at 516.195 kb on - strand, within TX73_002420 at 516.200 kb on + strand, within TX73_002420 at 516.210 kb on - strand, within TX73_002420 at 516.262 kb on + strand, within TX73_002420 at 516.267 kb on + strand, within TX73_002420 at 516.267 kb on + strand, within TX73_002420 at 516.277 kb on + strand at 516.291 kb on + strand at 516.322 kb on + strand at 516.322 kb on + strand at 516.322 kb on + strand at 516.346 kb on + strand at 516.535 kb on + strand, within TX73_002425 at 516.535 kb on + strand, within TX73_002425 at 516.548 kb on - strand, within TX73_002425 at 516.632 kb on + strand, within TX73_002425 at 516.632 kb on + strand, within TX73_002425 at 516.632 kb on + strand, within TX73_002425 at 516.638 kb on - strand, within TX73_002425 at 516.640 kb on - strand, within TX73_002425 at 516.654 kb on + strand, within TX73_002425 at 516.654 kb on + strand, within TX73_002425 at 516.667 kb on - strand, within TX73_002425 at 516.689 kb on + strand, within TX73_002425 at 516.695 kb on + strand, within TX73_002425 at 516.695 kb on + strand, within TX73_002425 at 516.703 kb on - strand, within TX73_002425 at 516.705 kb on + strand, within TX73_002425 at 516.725 kb on + strand, within TX73_002425 at 516.730 kb on + strand, within TX73_002425 at 516.733 kb on - strand, within TX73_002425 at 516.746 kb on + strand, within TX73_002425 at 516.746 kb on + strand, within TX73_002425 at 516.754 kb on - strand, within TX73_002425 at 516.754 kb on - strand, within TX73_002425 at 516.759 kb on - strand, within TX73_002425 at 516.798 kb on - strand, within TX73_002425 at 516.812 kb on + strand, within TX73_002425 at 516.855 kb on + strand, within TX73_002425 at 516.965 kb on - strand, within TX73_002425 at 516.968 kb on + strand, within TX73_002425 at 516.976 kb on - strand, within TX73_002425 at 516.976 kb on - strand, within TX73_002425 at 516.979 kb on + strand, within TX73_002425 at 516.994 kb on + strand, within TX73_002425 at 516.999 kb on + strand, within TX73_002425 at 517.002 kb on - strand, within TX73_002425 at 517.004 kb on + strand, within TX73_002425 at 517.007 kb on - strand, within TX73_002425 at 517.009 kb on + strand, within TX73_002425 at 517.009 kb on + strand, within TX73_002425 at 517.012 kb on - strand, within TX73_002425 at 517.012 kb on - strand, within TX73_002425 at 517.012 kb on - strand, within TX73_002425 at 517.017 kb on - strand, within TX73_002425 at 517.073 kb on + strand, within TX73_002425 at 517.086 kb on + strand, within TX73_002425 at 517.086 kb on + strand, within TX73_002425 at 517.133 kb on + strand at 517.141 kb on - strand at 517.156 kb on + strand at 517.183 kb on + strand at 517.185 kb on + strand at 517.190 kb on - strand at 517.210 kb on + strand at 517.218 kb on - strand at 517.238 kb on + strand at 517.282 kb on + strand, within TX73_002430 at 517.319 kb on + strand, within TX73_002430 at 517.384 kb on + strand, within TX73_002430 at 517.403 kb on + strand, within TX73_002430 at 517.403 kb on + strand, within TX73_002430 at 517.429 kb on - strand, within TX73_002430 at 517.548 kb on + strand, within TX73_002430 at 517.556 kb on - strand, within TX73_002430 at 517.573 kb on + strand, within TX73_002430 at 517.573 kb on + strand, within TX73_002430 at 517.616 kb on + strand, within TX73_002430 at 517.621 kb on + strand, within TX73_002430 at 517.634 kb on - strand, within TX73_002430 at 517.634 kb on - strand, within TX73_002430 at 517.680 kb on - strand, within TX73_002430 at 517.825 kb on - strand, within TX73_002430 at 517.839 kb on - strand, within TX73_002430 at 517.839 kb on - strand, within TX73_002430 at 517.893 kb on - strand, within TX73_002430 at 517.972 kb on - strand at 518.014 kb on + strand at 518.047 kb on + strand at 518.061 kb on - strand at 518.061 kb on - strand at 518.081 kb on + strand at 518.087 kb on + strand at 518.150 kb on + strand, within TX73_002435
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) with 10 mM Sodium Chloride remove 515,414 - +0.9 515,477 - -0.6 515,524 + TX73_002420 0.14 -2.8 515,537 - TX73_002420 0.15 +0.7 515,624 + TX73_002420 0.24 -2.2 515,691 - TX73_002420 0.31 +0.6 515,749 + TX73_002420 0.37 +0.2 515,756 + TX73_002420 0.37 +1.1 515,765 - TX73_002420 0.38 +0.5 515,774 - TX73_002420 0.39 +0.5 515,785 + TX73_002420 0.40 +0.1 515,785 + TX73_002420 0.40 +2.8 515,793 - TX73_002420 0.41 +0.9 515,828 - TX73_002420 0.45 -1.7 515,831 + TX73_002420 0.45 +0.2 515,893 - TX73_002420 0.51 -1.7 515,953 + TX73_002420 0.57 -2.7 515,965 + TX73_002420 0.59 +1.3 516,091 + TX73_002420 0.71 +1.0 516,094 - TX73_002420 0.72 -0.4 516,096 + TX73_002420 0.72 -0.8 516,101 + TX73_002420 0.72 -1.7 516,104 - TX73_002420 0.73 -2.2 516,116 + TX73_002420 0.74 +0.5 516,124 - TX73_002420 0.75 -0.1 516,152 - TX73_002420 0.78 +0.4 516,172 - TX73_002420 0.80 +0.1 516,180 - TX73_002420 0.80 +0.2 516,180 - TX73_002420 0.80 -1.6 516,185 - TX73_002420 0.81 -0.6 516,187 + TX73_002420 0.81 -2.7 516,190 - TX73_002420 0.81 +1.1 516,194 + TX73_002420 0.82 -1.0 516,195 - TX73_002420 0.82 -0.6 516,200 + TX73_002420 0.82 +0.4 516,210 - TX73_002420 0.83 -2.5 516,262 + TX73_002420 0.89 -2.0 516,267 + TX73_002420 0.89 +1.2 516,267 + TX73_002420 0.89 +0.5 516,277 + -1.2 516,291 + -0.5 516,322 + -2.3 516,322 + +0.1 516,322 + -1.7 516,346 + -1.5 516,535 + TX73_002425 0.20 -0.7 516,535 + TX73_002425 0.20 +1.5 516,548 - TX73_002425 0.21 -0.5 516,632 + TX73_002425 0.31 -0.8 516,632 + TX73_002425 0.31 +0.6 516,632 + TX73_002425 0.31 -0.7 516,638 - TX73_002425 0.32 -0.8 516,640 - TX73_002425 0.32 -0.2 516,654 + TX73_002425 0.34 +1.2 516,654 + TX73_002425 0.34 +0.2 516,667 - TX73_002425 0.36 +2.4 516,689 + TX73_002425 0.38 +2.2 516,695 + TX73_002425 0.39 +0.2 516,695 + TX73_002425 0.39 -0.4 516,703 - TX73_002425 0.40 -0.7 516,705 + TX73_002425 0.40 +0.5 516,725 + TX73_002425 0.43 +1.7 516,730 + TX73_002425 0.43 +2.3 516,733 - TX73_002425 0.44 +1.9 516,746 + TX73_002425 0.45 -0.5 516,746 + TX73_002425 0.45 +0.2 516,754 - TX73_002425 0.46 -1.4 516,754 - TX73_002425 0.46 +1.2 516,759 - TX73_002425 0.47 -0.5 516,798 - TX73_002425 0.52 +0.9 516,812 + TX73_002425 0.53 -0.9 516,855 + TX73_002425 0.58 +1.7 516,965 - TX73_002425 0.72 -1.8 516,968 + TX73_002425 0.72 +0.5 516,976 - TX73_002425 0.73 -1.2 516,976 - TX73_002425 0.73 -0.9 516,979 + TX73_002425 0.73 +0.6 516,994 + TX73_002425 0.75 -2.4 516,999 + TX73_002425 0.76 -0.1 517,002 - TX73_002425 0.76 +0.8 517,004 + TX73_002425 0.76 -0.0 517,007 - TX73_002425 0.77 +0.7 517,009 + TX73_002425 0.77 +0.6 517,009 + TX73_002425 0.77 +0.8 517,012 - TX73_002425 0.77 -0.3 517,012 - TX73_002425 0.77 +1.7 517,012 - TX73_002425 0.77 -1.5 517,017 - TX73_002425 0.78 +0.1 517,073 + TX73_002425 0.85 -1.8 517,086 + TX73_002425 0.86 +0.9 517,086 + TX73_002425 0.86 -0.9 517,133 + +1.6 517,141 - -0.5 517,156 + +1.0 517,183 + +1.3 517,185 + -0.2 517,190 - -1.5 517,210 + -0.3 517,218 - +0.4 517,238 + +0.9 517,282 + TX73_002430 0.11 -0.9 517,319 + TX73_002430 0.15 -1.6 517,384 + TX73_002430 0.23 +1.3 517,403 + TX73_002430 0.25 +1.7 517,403 + TX73_002430 0.25 -1.0 517,429 - TX73_002430 0.28 +0.9 517,548 + TX73_002430 0.43 -0.9 517,556 - TX73_002430 0.44 +0.7 517,573 + TX73_002430 0.46 +0.5 517,573 + TX73_002430 0.46 +0.4 517,616 + TX73_002430 0.51 +0.3 517,621 + TX73_002430 0.51 +2.4 517,634 - TX73_002430 0.53 -1.2 517,634 - TX73_002430 0.53 +0.5 517,680 - TX73_002430 0.58 +0.1 517,825 - TX73_002430 0.76 +2.0 517,839 - TX73_002430 0.78 -0.2 517,839 - TX73_002430 0.78 -2.2 517,893 - TX73_002430 0.84 +0.7 517,972 - +0.5 518,014 + +0.4 518,047 + +1.1 518,061 - +1.9 518,061 - +0.7 518,081 + +0.7 518,087 + +3.8 518,150 + TX73_002435 0.10 +1.6
Or see this region's nucleotide sequence