Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_017185

Experiment: OAcsForEtOH (C); monoculture

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	OAcsForEtOH (C); monoculture
3,751,023	+		TX73_017180	0.65	-0.5
3,751,023	+		TX73_017180	0.65	+0.2
3,751,027	-		TX73_017180	0.66	+0.2
3,751,083	+		TX73_017180	0.69	-0.5
3,751,091	-		TX73_017180	0.69	+0.1
3,751,101	-		TX73_017180	0.70	+0.5
3,751,173	-		TX73_017180	0.74	-0.9
3,751,224	+		TX73_017180	0.77	-0.0
3,751,224	+		TX73_017180	0.77	+0.1
3,751,232	-		TX73_017180	0.77	+0.0
3,751,234	+		TX73_017180	0.77	-0.6
3,751,237	-		TX73_017180	0.77	-0.7
3,751,268	-		TX73_017180	0.79	-0.1
3,751,270	+		TX73_017180	0.79	-0.3
3,751,291	-		TX73_017180	0.80	+0.6
3,751,310	+		TX73_017180	0.82	-0.1
3,751,318	-		TX73_017180	0.82	+0.9
3,751,325	+		TX73_017180	0.82	-0.0
3,751,326	-		TX73_017180	0.82	+0.9
3,751,333	-		TX73_017180	0.83	+0.2
3,751,336	+		TX73_017180	0.83	+0.3
3,751,395	+		TX73_017180	0.86	+0.6
3,751,395	+		TX73_017180	0.86	+0.6
3,751,403	-		TX73_017180	0.87	-0.2
3,751,403	-		TX73_017180	0.87	-0.1
3,751,436	+		TX73_017180	0.89	-0.0
3,751,591	+				-0.4
3,751,591	+				-0.7
3,751,638	+				-1.0
3,751,666	-				+0.4
3,751,683	-				-0.6
3,751,781	+				-0.6
3,751,791	+				-0.8
3,752,080	+		TX73_017185	0.12	-0.1
3,752,080	+		TX73_017185	0.12	-0.6
3,752,088	-		TX73_017185	0.13	-0.0
3,752,088	-		TX73_017185	0.13	+0.3
3,752,157	-		TX73_017185	0.21	-0.0
3,752,157	-		TX73_017185	0.21	-0.9
3,752,157	-		TX73_017185	0.21	+0.5
3,752,164	+		TX73_017185	0.21	+0.2
3,752,172	-		TX73_017185	0.22	-1.3
3,752,177	-		TX73_017185	0.23	+1.6
3,752,223	-		TX73_017185	0.28	+0.5
3,752,302	-		TX73_017185	0.37	+0.2
3,752,306	+		TX73_017185	0.38	-0.5
3,752,403	-		TX73_017185	0.49	+1.3
3,752,428	+		TX73_017185	0.52	+1.0
3,752,435	+		TX73_017185	0.53	+0.5
3,752,435	+		TX73_017185	0.53	+0.6
3,752,435	+		TX73_017185	0.53	-0.3
3,752,441	-		TX73_017185	0.53	+0.3
3,752,443	-		TX73_017185	0.53	-0.4
3,752,525	-		TX73_017185	0.63	-1.4
3,752,574	+		TX73_017185	0.69	-0.4
3,752,574	+		TX73_017185	0.69	+0.1
3,752,603	-		TX73_017185	0.72	-0.4
3,752,616	-		TX73_017185	0.73	-0.7
3,752,618	-		TX73_017185	0.74	-0.1
3,752,622	+		TX73_017185	0.74	+0.2
3,752,630	-		TX73_017185	0.75	-1.4
3,752,630	-		TX73_017185	0.75	+0.1
3,752,682	-		TX73_017185	0.81	-0.2
3,752,701	-		TX73_017185	0.83	+0.6
3,752,841	+				+0.7
3,752,862	-				-0.1
3,752,869	+				+0.2
3,752,877	-				-0.8
3,752,877	-				-0.8
3,752,881	+				-0.8
3,752,882	+				-0.4
3,752,900	+				+0.2
3,752,910	-				+0.7
3,752,919	-				-0.1
3,752,989	-				-0.1
3,753,012	+				-0.5
3,753,048	-				+0.2
3,753,064	-				+0.2
3,753,067	+				+0.3
3,753,075	+				-0.8
3,753,083	-				-1.0
3,753,083	-				-0.5
3,753,083	-				-1.0
3,753,083	-				+1.4
3,753,085	+				-0.9
3,753,085	-				-0.7
3,753,086	+				+0.0
3,753,094	+				-0.4
3,753,095	+				+0.0
3,753,095	+				+1.7
3,753,105	+				+0.5
3,753,125	+				-0.4
3,753,126	+				-0.1
3,753,126	+				-0.1
3,753,126	+				+0.5
3,753,126	+				-0.5
3,753,126	+				-1.2
3,753,134	-				-0.1
3,753,134	-				-2.0
3,753,134	-				+0.4
3,753,134	-				-1.0
3,753,134	-				+0.6
3,753,134	-				-0.2
3,753,134	-				-0.3
3,753,192	+				+1.0
3,753,192	-				+0.1
3,753,242	-				+0.3
3,753,299	+				+0.4
3,753,305	+				-0.3
3,753,305	+				-3.8
3,753,308	-				-0.4
3,753,313	-				+0.2
3,753,316	+				-0.3
3,753,316	+				-0.9
3,753,323	-				+0.3
3,753,324	-				+0.1
3,753,324	-				-0.0
3,753,324	-				+0.0
3,753,324	-				+0.1
3,753,329	+				-0.4
3,753,333	+				+0.0
3,753,352	+				-0.4
3,753,361	+				-0.2
3,753,362	-				-1.0
3,753,362	-				+1.3
3,753,373	+				-0.0
3,753,400	-				+0.3
3,753,406	-				-1.2
3,753,465	+				-0.2
3,753,465	+				+0.1
3,753,465	+				+0.4
3,753,467	+				+0.4
3,753,467	+				+0.5
3,753,470	+				+0.3
3,753,490	-				+0.2
3,753,549	-				-0.2
3,753,553	+				-0.5
3,753,570	+				+0.3
3,753,575	-				-0.4
3,753,578	+				-0.0
3,753,578	-				+0.1
3,753,589	+				+0.4
3,753,589	+				+0.2
3,753,589	+				+0.1
3,753,591	+				-0.2
3,753,608	+				-0.4
3,753,613	+				+0.6
3,753,613	+				+0.4
3,753,618	+				+0.7
3,753,621	+				+0.4
3,753,621	+				-0.7
3,753,626	-				+0.6
3,753,626	-				+0.6
3,753,629	-				+0.3
3,753,636	+				+0.6
3,753,643	+				-0.0
3,753,648	-				+0.3
3,753,651	-				-0.0
3,753,651	-				+0.1
3,753,662	+				-0.3
3,753,674	-				+0.9
3,753,674	-				+0.6
3,753,684	+				-0.3
3,753,692	-				-0.0
3,753,695	+				-0.2
3,753,695	+				-1.5
3,753,713	+				-1.7
3,753,716	-		TX73_017190	0.10	-0.9
3,753,720	+		TX73_017190	0.11	-0.1
3,753,721	-		TX73_017190	0.11	-0.4
3,753,721	-		TX73_017190	0.11	-0.1
3,753,750	+		TX73_017190	0.17	-0.5
3,753,750	+		TX73_017190	0.17	+1.0
3,753,751	+		TX73_017190	0.17	-0.5
3,753,751	+		TX73_017190	0.17	-1.3
3,753,751	+		TX73_017190	0.17	-0.9
3,753,758	-		TX73_017190	0.19	-0.9
3,753,758	-		TX73_017190	0.19	-1.1
3,753,758	-		TX73_017190	0.19	-1.3
3,753,759	-		TX73_017190	0.19	-0.6
3,753,761	-		TX73_017190	0.19	-0.7
3,753,769	-		TX73_017190	0.21	-0.6
3,753,779	+		TX73_017190	0.23	-0.9
3,753,781	+		TX73_017190	0.24	-1.3
3,753,787	-		TX73_017190	0.25	-0.6
3,753,801	+		TX73_017190	0.28	-1.0
3,753,806	+		TX73_017190	0.29	-0.8
3,753,809	-		TX73_017190	0.29	-0.9
3,753,814	-		TX73_017190	0.30	-0.9
3,753,819	-		TX73_017190	0.31	-0.4
3,753,836	+		TX73_017190	0.35	-1.2
3,753,846	+		TX73_017190	0.37	-0.2