Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02900

Experiment: mutant library grown in Supernatant; Chryseobacterium proteolyticum TBS_027 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02899 and MPMX20_02900 overlap by 4 nucleotidesMPMX20_02900 and MPMX20_02901 overlap by 4 nucleotidesMPMX20_02901 and MPMX20_02902 overlap by 8 nucleotides MPMX20_02899: MPMX20_02899 - hypothetical protein, at 3,045,646 to 3,046,335 _02899 MPMX20_02900: MPMX20_02900 - putative protein YlcG, at 3,046,332 to 3,046,472 _02900 MPMX20_02901: MPMX20_02901 - hypothetical protein, at 3,046,469 to 3,047,080 _02901 MPMX20_02902: MPMX20_02902 - Serine/threonine-protein phosphatase 1, at 3,047,073 to 3,047,741 _02902 Position (kb) 3046 3047Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3045.355 kb on - strandat 3045.406 kb on + strandat 3045.412 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.491 kb on + strandat 3045.499 kb on - strandat 3045.499 kb on - strandat 3045.499 kb on - strandat 3045.499 kb on - strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.501 kb on + strandat 3045.509 kb on - strandat 3045.509 kb on - strandat 3045.509 kb on - strandat 3045.514 kb on - strandat 3045.556 kb on + strandat 3045.563 kb on + strandat 3045.736 kb on - strand, within MPMX20_02899at 3045.738 kb on + strand, within MPMX20_02899at 3045.738 kb on + strand, within MPMX20_02899at 3045.738 kb on + strand, within MPMX20_02899at 3045.746 kb on - strand, within MPMX20_02899at 3045.808 kb on + strand, within MPMX20_02899at 3045.886 kb on + strand, within MPMX20_02899at 3045.942 kb on + strand, within MPMX20_02899at 3045.961 kb on + strand, within MPMX20_02899at 3045.964 kb on - strand, within MPMX20_02899at 3046.073 kb on - strand, within MPMX20_02899at 3046.109 kb on + strand, within MPMX20_02899at 3046.126 kb on + strand, within MPMX20_02899at 3046.273 kb on + strandat 3046.286 kb on - strandat 3046.286 kb on - strandat 3046.476 kb on + strandat 3046.506 kb on + strandat 3046.509 kb on - strandat 3046.514 kb on - strandat 3046.514 kb on - strandat 3046.527 kb on + strandat 3046.545 kb on - strand, within MPMX20_02901at 3046.615 kb on - strand, within MPMX20_02901at 3046.627 kb on + strand, within MPMX20_02901at 3046.627 kb on + strand, within MPMX20_02901at 3046.635 kb on - strand, within MPMX20_02901at 3046.665 kb on - strand, within MPMX20_02901at 3046.671 kb on + strand, within MPMX20_02901at 3046.672 kb on - strand, within MPMX20_02901at 3046.697 kb on + strand, within MPMX20_02901at 3046.699 kb on + strand, within MPMX20_02901at 3046.699 kb on + strand, within MPMX20_02901at 3046.707 kb on - strand, within MPMX20_02901at 3046.768 kb on + strand, within MPMX20_02901at 3046.776 kb on - strand, within MPMX20_02901at 3046.785 kb on + strand, within MPMX20_02901at 3046.862 kb on - strand, within MPMX20_02901at 3046.881 kb on - strand, within MPMX20_02901at 3046.881 kb on - strand, within MPMX20_02901at 3046.918 kb on + strand, within MPMX20_02901at 3046.938 kb on + strand, within MPMX20_02901at 3046.938 kb on + strand, within MPMX20_02901at 3046.938 kb on + strand, within MPMX20_02901at 3046.946 kb on - strand, within MPMX20_02901at 3046.946 kb on - strand, within MPMX20_02901at 3046.946 kb on - strand, within MPMX20_02901at 3046.946 kb on - strand, within MPMX20_02901at 3046.946 kb on - strand, within MPMX20_02901at 3046.946 kb on - strand, within MPMX20_02901at 3046.946 kb on - strand, within MPMX20_02901at 3046.975 kb on + strand, within MPMX20_02901at 3046.983 kb on - strand, within MPMX20_02901at 3046.987 kb on + strand, within MPMX20_02901at 3046.993 kb on - strand, within MPMX20_02901at 3046.995 kb on - strand, within MPMX20_02901at 3047.044 kb on - strandat 3047.088 kb on + strandat 3047.089 kb on + strandat 3047.097 kb on - strandat 3047.097 kb on - strandat 3047.097 kb on - strandat 3047.168 kb on - strand, within MPMX20_02902at 3047.209 kb on + strand, within MPMX20_02902at 3047.235 kb on - strand, within MPMX20_02902at 3047.249 kb on + strand, within MPMX20_02902at 3047.249 kb on + strand, within MPMX20_02902at 3047.313 kb on + strand, within MPMX20_02902at 3047.401 kb on + strand, within MPMX20_02902

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Chryseobacterium proteolyticum TBS_027 grown in LB
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3,045,355 - -1.0
3,045,406 + -1.0
3,045,412 + -1.0
3,045,491 + -1.6
3,045,491 + +0.3
3,045,491 + -1.5
3,045,491 + -2.1
3,045,491 + -1.6
3,045,491 + -1.6
3,045,491 + -0.9
3,045,491 + -1.7
3,045,491 + -2.7
3,045,491 + -1.2
3,045,491 + -1.9
3,045,491 + -2.3
3,045,491 + -1.0
3,045,499 - -1.2
3,045,499 - -1.8
3,045,499 - -1.8
3,045,499 - -1.3
3,045,501 + -1.7
3,045,501 + -1.9
3,045,501 + -2.2
3,045,501 + -1.4
3,045,501 + -1.5
3,045,501 + -1.5
3,045,509 - -1.0
3,045,509 - -0.6
3,045,509 - -1.2
3,045,514 - -0.5
3,045,556 + -2.4
3,045,563 + -0.7
3,045,736 - MPMX20_02899 0.13 -1.9
3,045,738 + MPMX20_02899 0.13 -1.5
3,045,738 + MPMX20_02899 0.13 -0.7
3,045,738 + MPMX20_02899 0.13 -3.1
3,045,746 - MPMX20_02899 0.14 -2.3
3,045,808 + MPMX20_02899 0.23 -2.2
3,045,886 + MPMX20_02899 0.35 -1.1
3,045,942 + MPMX20_02899 0.43 -1.2
3,045,961 + MPMX20_02899 0.46 -0.6
3,045,964 - MPMX20_02899 0.46 -1.8
3,046,073 - MPMX20_02899 0.62 -1.6
3,046,109 + MPMX20_02899 0.67 -1.6
3,046,126 + MPMX20_02899 0.70 -3.8
3,046,273 + -0.3
3,046,286 - -2.0
3,046,286 - -1.8
3,046,476 + -2.8
3,046,506 + -2.5
3,046,509 - -1.1
3,046,514 - -1.1
3,046,514 - -1.3
3,046,527 + -1.9
3,046,545 - MPMX20_02901 0.12 -1.9
3,046,615 - MPMX20_02901 0.24 -1.7
3,046,627 + MPMX20_02901 0.26 -2.8
3,046,627 + MPMX20_02901 0.26 -2.1
3,046,635 - MPMX20_02901 0.27 -1.2
3,046,665 - MPMX20_02901 0.32 -1.7
3,046,671 + MPMX20_02901 0.33 -2.3
3,046,672 - MPMX20_02901 0.33 -1.3
3,046,697 + MPMX20_02901 0.37 -2.7
3,046,699 + MPMX20_02901 0.38 -2.9
3,046,699 + MPMX20_02901 0.38 -3.0
3,046,707 - MPMX20_02901 0.39 -1.3
3,046,768 + MPMX20_02901 0.49 -3.2
3,046,776 - MPMX20_02901 0.50 -2.1
3,046,785 + MPMX20_02901 0.52 -2.6
3,046,862 - MPMX20_02901 0.64 -2.1
3,046,881 - MPMX20_02901 0.67 -3.2
3,046,881 - MPMX20_02901 0.67 -2.6
3,046,918 + MPMX20_02901 0.73 -2.0
3,046,938 + MPMX20_02901 0.77 -1.9
3,046,938 + MPMX20_02901 0.77 -1.9
3,046,938 + MPMX20_02901 0.77 -2.6
3,046,946 - MPMX20_02901 0.78 -1.6
3,046,946 - MPMX20_02901 0.78 -2.9
3,046,946 - MPMX20_02901 0.78 -1.5
3,046,946 - MPMX20_02901 0.78 -1.5
3,046,946 - MPMX20_02901 0.78 -1.8
3,046,946 - MPMX20_02901 0.78 -1.8
3,046,946 - MPMX20_02901 0.78 -1.2
3,046,975 + MPMX20_02901 0.83 -2.8
3,046,983 - MPMX20_02901 0.84 -1.5
3,046,987 + MPMX20_02901 0.85 -2.4
3,046,993 - MPMX20_02901 0.86 -1.4
3,046,995 - MPMX20_02901 0.86 -2.6
3,047,044 - -1.3
3,047,088 + -1.9
3,047,089 + -1.6
3,047,097 - -1.6
3,047,097 - -1.8
3,047,097 - -2.5
3,047,168 - MPMX20_02902 0.14 -0.8
3,047,209 + MPMX20_02902 0.20 -2.7
3,047,235 - MPMX20_02902 0.24 -1.7
3,047,249 + MPMX20_02902 0.26 -2.6
3,047,249 + MPMX20_02902 0.26 -2.7
3,047,313 + MPMX20_02902 0.36 -2.9
3,047,401 + MPMX20_02902 0.49 -1.8

Or see this region's nucleotide sequence