Experiment: PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_024265 and TX73_024270 are separated by 184 nucleotides TX73_024270 and TX73_024275 are separated by 126 nucleotides
TX73_024265: TX73_024265 - xanthine dehydrogenase family protein subunit M, at 5,265,001 to 5,265,801
_024265
TX73_024270: TX73_024270 - CaiB/BaiF CoA-transferase family protein, at 5,265,986 to 5,267,101
_024270
TX73_024275: TX73_024275 - fumarylacetoacetase, at 5,267,228 to 5,268,493
_024275
Position (kb)
5265
5266
5267
5268 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5264.989 kb on - strand at 5265.092 kb on + strand, within TX73_024265 at 5265.130 kb on + strand, within TX73_024265 at 5265.130 kb on + strand, within TX73_024265 at 5265.138 kb on - strand, within TX73_024265 at 5265.171 kb on + strand, within TX73_024265 at 5265.179 kb on - strand, within TX73_024265 at 5265.191 kb on - strand, within TX73_024265 at 5265.289 kb on + strand, within TX73_024265 at 5265.307 kb on + strand, within TX73_024265 at 5265.307 kb on - strand, within TX73_024265 at 5265.307 kb on - strand, within TX73_024265 at 5265.371 kb on - strand, within TX73_024265 at 5265.397 kb on + strand, within TX73_024265 at 5265.443 kb on - strand, within TX73_024265 at 5265.447 kb on + strand, within TX73_024265 at 5265.447 kb on + strand, within TX73_024265 at 5265.453 kb on - strand, within TX73_024265 at 5265.455 kb on - strand, within TX73_024265 at 5265.455 kb on - strand, within TX73_024265 at 5265.455 kb on - strand, within TX73_024265 at 5265.558 kb on - strand, within TX73_024265 at 5265.576 kb on + strand, within TX73_024265 at 5265.584 kb on - strand, within TX73_024265 at 5265.591 kb on + strand, within TX73_024265 at 5265.616 kb on + strand, within TX73_024265 at 5265.633 kb on - strand, within TX73_024265 at 5265.692 kb on + strand, within TX73_024265 at 5265.700 kb on - strand, within TX73_024265 at 5265.745 kb on - strand at 5265.754 kb on + strand at 5265.792 kb on - strand at 5265.804 kb on - strand at 5265.819 kb on - strand at 5265.843 kb on + strand at 5265.843 kb on + strand at 5265.843 kb on + strand at 5265.882 kb on - strand at 5265.970 kb on + strand at 5265.986 kb on + strand at 5265.994 kb on - strand at 5265.994 kb on - strand at 5266.008 kb on + strand at 5266.008 kb on + strand at 5266.016 kb on - strand at 5266.091 kb on - strand at 5266.098 kb on + strand, within TX73_024270 at 5266.111 kb on - strand, within TX73_024270 at 5266.118 kb on - strand, within TX73_024270 at 5266.211 kb on + strand, within TX73_024270 at 5266.213 kb on - strand, within TX73_024270 at 5266.232 kb on + strand, within TX73_024270 at 5266.234 kb on + strand, within TX73_024270 at 5266.265 kb on + strand, within TX73_024270 at 5266.303 kb on - strand, within TX73_024270 at 5266.308 kb on + strand, within TX73_024270 at 5266.316 kb on - strand, within TX73_024270 at 5266.340 kb on - strand, within TX73_024270 at 5266.367 kb on + strand, within TX73_024270 at 5266.446 kb on + strand, within TX73_024270 at 5266.537 kb on + strand, within TX73_024270 at 5266.550 kb on + strand, within TX73_024270 at 5266.561 kb on + strand, within TX73_024270 at 5266.578 kb on - strand, within TX73_024270 at 5266.652 kb on - strand, within TX73_024270 at 5266.697 kb on + strand, within TX73_024270 at 5266.714 kb on + strand, within TX73_024270 at 5266.750 kb on + strand, within TX73_024270 at 5266.750 kb on + strand, within TX73_024270 at 5266.750 kb on + strand, within TX73_024270 at 5266.832 kb on - strand, within TX73_024270 at 5266.855 kb on + strand, within TX73_024270 at 5266.855 kb on + strand, within TX73_024270 at 5266.855 kb on + strand, within TX73_024270 at 5266.863 kb on - strand, within TX73_024270 at 5266.863 kb on - strand, within TX73_024270 at 5266.882 kb on + strand, within TX73_024270 at 5266.911 kb on + strand, within TX73_024270 at 5266.912 kb on - strand, within TX73_024270 at 5266.999 kb on - strand at 5267.040 kb on - strand at 5267.077 kb on + strand at 5267.128 kb on + strand at 5267.249 kb on + strand at 5267.265 kb on + strand at 5267.323 kb on - strand at 5267.365 kb on + strand, within TX73_024275 at 5267.373 kb on - strand, within TX73_024275 at 5267.431 kb on + strand, within TX73_024275 at 5267.436 kb on + strand, within TX73_024275 at 5267.518 kb on - strand, within TX73_024275 at 5267.540 kb on - strand, within TX73_024275 at 5267.540 kb on - strand, within TX73_024275 at 5267.706 kb on - strand, within TX73_024275 at 5267.710 kb on - strand, within TX73_024275 at 5267.724 kb on + strand, within TX73_024275 at 5267.783 kb on + strand, within TX73_024275 at 5267.789 kb on - strand, within TX73_024275 at 5267.791 kb on + strand, within TX73_024275 at 5267.798 kb on + strand, within TX73_024275 at 5267.828 kb on + strand, within TX73_024275 at 5267.934 kb on + strand, within TX73_024275 at 5267.942 kb on - strand, within TX73_024275 at 5267.980 kb on + strand, within TX73_024275 at 5268.026 kb on + strand, within TX73_024275
Per-strain Table
Position Strand Gene LocusTag Fraction PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark remove 5,264,989 - -0.5 5,265,092 + TX73_024265 0.11 -0.0 5,265,130 + TX73_024265 0.16 +0.1 5,265,130 + TX73_024265 0.16 +0.7 5,265,138 - TX73_024265 0.17 +0.3 5,265,171 + TX73_024265 0.21 +0.2 5,265,179 - TX73_024265 0.22 +0.2 5,265,191 - TX73_024265 0.24 -0.9 5,265,289 + TX73_024265 0.36 +0.6 5,265,307 + TX73_024265 0.38 -0.8 5,265,307 - TX73_024265 0.38 +0.2 5,265,307 - TX73_024265 0.38 -0.2 5,265,371 - TX73_024265 0.46 +0.3 5,265,397 + TX73_024265 0.49 -0.3 5,265,443 - TX73_024265 0.55 +0.6 5,265,447 + TX73_024265 0.56 +0.6 5,265,447 + TX73_024265 0.56 +1.3 5,265,453 - TX73_024265 0.56 -0.3 5,265,455 - TX73_024265 0.57 -0.1 5,265,455 - TX73_024265 0.57 +1.2 5,265,455 - TX73_024265 0.57 +0.6 5,265,558 - TX73_024265 0.70 +0.4 5,265,576 + TX73_024265 0.72 -0.2 5,265,584 - TX73_024265 0.73 +0.4 5,265,591 + TX73_024265 0.74 +0.3 5,265,616 + TX73_024265 0.77 -0.9 5,265,633 - TX73_024265 0.79 +0.0 5,265,692 + TX73_024265 0.86 -0.3 5,265,700 - TX73_024265 0.87 -0.3 5,265,745 - -2.2 5,265,754 + +0.2 5,265,792 - -0.4 5,265,804 - +0.9 5,265,819 - -0.5 5,265,843 + +0.5 5,265,843 + +1.1 5,265,843 + +0.3 5,265,882 - +0.2 5,265,970 + -0.6 5,265,986 + -0.1 5,265,994 - +0.2 5,265,994 - -0.2 5,266,008 + -0.3 5,266,008 + -1.4 5,266,016 - -0.4 5,266,091 - +1.2 5,266,098 + TX73_024270 0.10 -0.1 5,266,111 - TX73_024270 0.11 +0.6 5,266,118 - TX73_024270 0.12 +0.6 5,266,211 + TX73_024270 0.20 +0.4 5,266,213 - TX73_024270 0.20 +1.9 5,266,232 + TX73_024270 0.22 -0.2 5,266,234 + TX73_024270 0.22 +0.8 5,266,265 + TX73_024270 0.25 +1.0 5,266,303 - TX73_024270 0.28 -0.7 5,266,308 + TX73_024270 0.29 +0.4 5,266,316 - TX73_024270 0.30 -1.3 5,266,340 - TX73_024270 0.32 -1.1 5,266,367 + TX73_024270 0.34 -0.8 5,266,446 + TX73_024270 0.41 +0.6 5,266,537 + TX73_024270 0.49 +0.7 5,266,550 + TX73_024270 0.51 +1.6 5,266,561 + TX73_024270 0.52 -0.3 5,266,578 - TX73_024270 0.53 +1.3 5,266,652 - TX73_024270 0.60 +1.0 5,266,697 + TX73_024270 0.64 +0.6 5,266,714 + TX73_024270 0.65 +0.7 5,266,750 + TX73_024270 0.68 +0.6 5,266,750 + TX73_024270 0.68 -1.0 5,266,750 + TX73_024270 0.68 -0.6 5,266,832 - TX73_024270 0.76 -0.4 5,266,855 + TX73_024270 0.78 +0.5 5,266,855 + TX73_024270 0.78 +0.4 5,266,855 + TX73_024270 0.78 -0.6 5,266,863 - TX73_024270 0.79 +0.1 5,266,863 - TX73_024270 0.79 -0.6 5,266,882 + TX73_024270 0.80 +0.4 5,266,911 + TX73_024270 0.83 -0.6 5,266,912 - TX73_024270 0.83 +0.5 5,266,999 - +2.1 5,267,040 - +0.4 5,267,077 + +0.6 5,267,128 + +0.1 5,267,249 + -0.8 5,267,265 + -0.9 5,267,323 - +0.1 5,267,365 + TX73_024275 0.11 +0.3 5,267,373 - TX73_024275 0.11 -1.1 5,267,431 + TX73_024275 0.16 +0.1 5,267,436 + TX73_024275 0.16 +0.1 5,267,518 - TX73_024275 0.23 -1.1 5,267,540 - TX73_024275 0.25 +0.3 5,267,540 - TX73_024275 0.25 +0.2 5,267,706 - TX73_024275 0.38 -0.1 5,267,710 - TX73_024275 0.38 -0.3 5,267,724 + TX73_024275 0.39 +0.2 5,267,783 + TX73_024275 0.44 +0.5 5,267,789 - TX73_024275 0.44 -0.3 5,267,791 + TX73_024275 0.44 +0.6 5,267,798 + TX73_024275 0.45 +0.2 5,267,828 + TX73_024275 0.47 +0.5 5,267,934 + TX73_024275 0.56 +0.2 5,267,942 - TX73_024275 0.56 +0.7 5,267,980 + TX73_024275 0.59 -0.9 5,268,026 + TX73_024275 0.63 +0.2
Or see this region's nucleotide sequence