Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_012430

Experiment: PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
2,727,879	-		TX73_012415	0.62	+0.2
2,727,909	+		TX73_012415	0.70	-1.0
2,728,007	+				+0.0
2,728,017	+				+1.3
2,728,025	-				+0.5
2,728,025	-				-0.5
2,728,060	-				+1.5
2,728,067	+				+0.1
2,728,071	+				-0.4
2,728,075	-				-0.3
2,728,076	+				-0.3
2,728,084	-				-0.8
2,728,084	-				+0.8
2,728,106	-				-0.5
2,728,143	+		TX73_012420	0.78	+0.7
2,728,160	-				+0.5
2,728,160	-				+0.4
2,728,160	-				+0.2
2,728,162	+				-0.0
2,728,210	+				-0.2
2,728,218	-				-0.7
2,728,225	+				-0.1
2,728,233	-				+0.6
2,728,240	-				+1.6
2,728,279	+				+1.0
2,728,282	-				-0.7
2,728,298	+				+0.8
2,728,318	+				+0.1
2,728,318	+				-0.4
2,728,342	+				-0.2
2,728,350	-				-1.6
2,728,432	-				+0.0
2,728,571	-				+0.6
2,728,571	-				-0.0
2,728,573	-				+0.1
2,728,574	+				+0.6
2,728,581	-				-1.4
2,728,629	+				+0.2
2,728,637	-				+0.8
2,728,644	+				-1.4
2,728,645	+				-1.4
2,728,652	-				-0.7
2,728,653	-				-0.3
2,728,653	-				+0.4
2,728,654	+				+1.0
2,728,668	+				-0.8
2,728,674	+				-0.6
2,728,689	-				-0.1
2,728,699	+				+0.5
2,728,709	+				-0.3
2,728,786	+				-0.1
2,728,786	+				-0.4
2,728,786	+				+1.3
2,728,786	+				+0.1
2,728,786	+				+0.2
2,728,786	+				-0.8
2,728,786	+				-0.4
2,728,794	-				+1.0
2,728,794	-				+0.4
2,728,794	-				+0.6
2,728,817	-				+1.8
2,728,817	-				+0.0
2,728,861	-				-1.2
2,728,883	-				+0.6
2,728,886	+				-0.2
2,728,886	+				-0.1
2,728,886	+				+0.5
2,728,897	+				-0.4
2,728,907	-				+0.6
2,728,912	-				-0.7
2,728,924	-				-0.9
2,728,939	-				-2.1
2,728,939	-				+0.6
2,728,950	-				+0.6
2,728,950	-				-0.4
2,728,950	-				-0.2
2,728,958	+				-0.4
2,728,960	-				+0.1
2,728,974	-		TX73_012430	0.10	-0.1
2,728,984	-		TX73_012430	0.11	+0.4
2,728,984	-		TX73_012430	0.11	-0.3
2,728,989	+		TX73_012430	0.12	-0.1
2,728,990	+		TX73_012430	0.12	+0.5
2,729,035	-		TX73_012430	0.16	+0.4
2,729,035	-		TX73_012430	0.16	+1.2
2,729,035	-		TX73_012430	0.16	+1.9
2,729,035	-		TX73_012430	0.16	+0.7
2,729,037	+		TX73_012430	0.16	-0.1
2,729,046	-		TX73_012430	0.17	-0.5
2,729,063	+		TX73_012430	0.19	+0.2
2,729,066	-		TX73_012430	0.19	-0.4
2,729,066	-		TX73_012430	0.19	-1.0
2,729,068	+		TX73_012430	0.19	+1.2
2,729,071	-		TX73_012430	0.20	-0.0
2,729,076	-		TX73_012430	0.20	-1.8
2,729,076	-		TX73_012430	0.20	-0.3
2,729,100	-		TX73_012430	0.23	-0.0
2,729,133	+		TX73_012430	0.26	+0.4
2,729,139	-		TX73_012430	0.26	+1.2
2,729,139	-		TX73_012430	0.26	-0.8
2,729,168	+		TX73_012430	0.29	+1.0
2,729,172	-		TX73_012430	0.30	+0.2
2,729,176	-		TX73_012430	0.30	-2.7
2,729,191	-		TX73_012430	0.32	-2.7
2,729,198	-		TX73_012430	0.32	+0.0
2,729,282	+		TX73_012430	0.41	-0.6
2,729,285	-		TX73_012430	0.41	+1.1
2,729,303	+		TX73_012430	0.43	+0.2
2,729,316	+		TX73_012430	0.44	-0.4
2,729,321	+		TX73_012430	0.45	+0.7
2,729,324	-		TX73_012430	0.45	+0.4
2,729,329	-		TX73_012430	0.45	-0.5
2,729,356	+		TX73_012430	0.48	+0.3
2,729,356	+		TX73_012430	0.48	-0.3
2,729,356	+		TX73_012430	0.48	-0.0
2,729,356	+		TX73_012430	0.48	+0.8
2,729,361	+		TX73_012430	0.49	+0.4
2,729,391	+		TX73_012430	0.52	-0.2
2,729,411	+		TX73_012430	0.54	-1.1
2,729,433	-		TX73_012430	0.56	+0.9
2,729,453	-		TX73_012430	0.58	+0.2
2,729,468	-		TX73_012430	0.59	+0.9
2,729,475	-		TX73_012430	0.60	+0.9
2,729,559	-		TX73_012430	0.68	+0.8
2,729,560	-		TX73_012430	0.68	+0.0
2,729,607	+		TX73_012430	0.73	+1.0
2,729,623	-		TX73_012430	0.75	-0.3
2,729,637	-		TX73_012430	0.76	-0.8
2,729,655	-		TX73_012430	0.78	-0.2
2,729,658	+		TX73_012430	0.78	-0.2
2,729,658	+		TX73_012430	0.78	+0.4
2,729,658	+		TX73_012430	0.78	+0.3
2,729,703	+		TX73_012430	0.83	+1.6
2,729,721	+		TX73_012430	0.84	+0.3
2,729,803	-				+1.7
2,729,847	+				-1.2
2,729,850	+				+0.1
2,729,860	-				+0.5
2,729,915	-				-0.5
2,729,925	-				+0.2
2,729,926	-				+0.6
2,729,979	+				+0.4
2,729,997	+				-1.7
2,730,009	-				+0.1
2,730,046	-		TX73_012435	0.11	-0.3
2,730,093	-		TX73_012435	0.16	+0.6
2,730,111	+		TX73_012435	0.18	-1.1
2,730,116	+		TX73_012435	0.19	+0.0
2,730,116	+		TX73_012435	0.19	-0.0
2,730,116	-		TX73_012435	0.19	-2.2
2,730,131	+		TX73_012435	0.21	-0.1
2,730,137	+		TX73_012435	0.21	-0.2
2,730,137	+		TX73_012435	0.21	+1.6
2,730,137	+		TX73_012435	0.21	+0.2
2,730,145	-		TX73_012435	0.22	-0.1
2,730,145	-		TX73_012435	0.22	+0.3
2,730,181	-		TX73_012435	0.26	-0.4
2,730,181	-		TX73_012435	0.26	-0.1
2,730,203	+		TX73_012435	0.29	+1.0
2,730,212	-		TX73_012435	0.30	-0.2
2,730,219	+		TX73_012435	0.31	+0.2
2,730,219	+		TX73_012435	0.31	+0.3
2,730,219	+		TX73_012435	0.31	-0.1
2,730,227	-		TX73_012435	0.32	-1.9
2,730,230	+		TX73_012435	0.32	+0.8
2,730,251	+		TX73_012435	0.34	-1.5
2,730,259	-		TX73_012435	0.35	+0.6
2,730,281	-		TX73_012435	0.38	+0.1
2,730,287	-		TX73_012435	0.39	-0.3
2,730,292	-		TX73_012435	0.39	-0.5
2,730,292	-		TX73_012435	0.39	+0.7
2,730,300	+		TX73_012435	0.40	+0.0
2,730,302	-		TX73_012435	0.40	+0.5
2,730,302	-		TX73_012435	0.40	+2.6
2,730,302	-		TX73_012435	0.40	-0.1
2,730,302	-		TX73_012435	0.40	+1.0
2,730,308	-		TX73_012435	0.41	-1.3
2,730,309	-		TX73_012435	0.41	-0.4
2,730,309	-		TX73_012435	0.41	-0.8
2,730,337	+		TX73_012435	0.44	+0.5
2,730,337	+		TX73_012435	0.44	+0.2
2,730,337	-		TX73_012435	0.44	+0.4
2,730,339	+		TX73_012435	0.45	+0.1
2,730,355	-		TX73_012435	0.46	-0.4
2,730,380	-		TX73_012435	0.49	-0.6
2,730,417	+		TX73_012435	0.53	-0.3
2,730,427	+		TX73_012435	0.55	+0.4
2,730,427	+		TX73_012435	0.55	-0.9
2,730,435	-		TX73_012435	0.56	+0.3
2,730,454	-		TX73_012435	0.58	-0.5
2,730,616	-		TX73_012435	0.76	-1.5
2,730,620	+		TX73_012435	0.77	+0.3
2,730,623	-		TX73_012435	0.77	-0.4
2,730,690	+		TX73_012435	0.85	-1.0
2,730,713	-		TX73_012435	0.87	-0.0
2,730,762	+				-1.8
2,730,795	+				-0.3
2,730,841	+				-0.2
2,730,849	+				+0.6
2,730,857	-				+0.3
2,730,857	-				-0.1