Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_004630

Experiment: PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
1,001,066	-		TX73_004625	0.52	-0.3
1,001,128	+		TX73_004625	0.58	+0.9
1,001,150	+		TX73_004625	0.61	-0.1
1,001,150	+		TX73_004625	0.61	-0.7
1,001,159	-		TX73_004625	0.62	+0.7
1,001,199	+		TX73_004625	0.66	+0.0
1,001,243	-		TX73_004625	0.71	-0.2
1,001,333	+		TX73_004625	0.81	-0.4
1,001,333	+		TX73_004625	0.81	-0.9
1,001,333	+		TX73_004625	0.81	+1.2
1,001,372	+		TX73_004625	0.85	-1.1
1,001,372	+		TX73_004625	0.85	-0.3
1,001,376	+		TX73_004625	0.85	+0.7
1,001,426	+				+0.0
1,001,434	-				+0.0
1,001,469	-				+1.6
1,001,469	-				-0.1
1,001,502	+				-0.2
1,001,519	+				+0.4
1,001,525	-				-0.2
1,001,570	-				-0.5
1,001,711	+				-1.6
1,001,728	+				+0.6
1,001,728	+				+0.4
1,001,765	+				+0.6
1,001,778	-				+0.6
1,001,816	+				+1.3
1,001,824	-				-0.1
1,001,880	+				+0.5
1,001,899	+				+0.3
1,001,907	+				-0.1
1,001,912	+				-0.2
1,001,932	-				-0.4
1,001,932	-				-0.4
1,001,943	+				-0.1
1,001,956	-				+1.5
1,001,963	+				-0.2
1,001,968	+				+0.1
1,002,016	+				-0.8
1,002,035	+				+0.8
1,002,035	+				+0.1
1,002,035	+				+0.5
1,002,052	+				+0.6
1,002,144	+				+0.2
1,002,152	-				-1.2
1,002,157	+				+2.2
1,002,251	+		TX73_004630	0.15	-0.9
1,002,273	+		TX73_004630	0.17	-0.9
1,002,309	+		TX73_004630	0.19	+0.4
1,002,332	-		TX73_004630	0.21	+1.7
1,002,368	+		TX73_004630	0.23	+0.2
1,002,446	+		TX73_004630	0.29	+1.0
1,002,454	-		TX73_004630	0.30	+0.7
1,002,454	-		TX73_004630	0.30	-0.5
1,002,457	+		TX73_004630	0.30	+1.1
1,002,459	-		TX73_004630	0.30	+0.9
1,002,465	+		TX73_004630	0.30	+0.4
1,002,473	-		TX73_004630	0.31	+0.1
1,002,473	-		TX73_004630	0.31	-0.2
1,002,473	-		TX73_004630	0.31	+0.9
1,002,475	+		TX73_004630	0.31	+0.7
1,002,521	+		TX73_004630	0.34	-0.3
1,002,529	-		TX73_004630	0.35	-0.2
1,002,540	+		TX73_004630	0.36	+0.1
1,002,540	+		TX73_004630	0.36	-0.6
1,002,542	-		TX73_004630	0.36	-0.2
1,002,552	-		TX73_004630	0.37	-0.3
1,002,553	-		TX73_004630	0.37	+0.5
1,002,553	-		TX73_004630	0.37	+0.1
1,002,553	-		TX73_004630	0.37	+1.0
1,002,585	-		TX73_004630	0.39	-0.1
1,002,667	-		TX73_004630	0.45	+0.3
1,002,680	+		TX73_004630	0.46	+0.4
1,002,688	-		TX73_004630	0.46	-0.5
1,002,714	-		TX73_004630	0.48	-0.0
1,002,732	-		TX73_004630	0.50	+0.5
1,002,763	-		TX73_004630	0.52	+0.9
1,002,812	-		TX73_004630	0.55	-1.0
1,002,812	-		TX73_004630	0.55	-0.0
1,002,812	-		TX73_004630	0.55	+0.3
1,002,817	-		TX73_004630	0.56	+0.2
1,002,822	+		TX73_004630	0.56	+0.5
1,002,876	+		TX73_004630	0.60	-2.2
1,002,884	-		TX73_004630	0.61	-0.4
1,002,909	+		TX73_004630	0.62	-0.1
1,002,947	-		TX73_004630	0.65	+0.9
1,002,947	-		TX73_004630	0.65	+0.4
1,003,016	-		TX73_004630	0.70	+0.3
1,003,063	+		TX73_004630	0.74	+0.6
1,003,083	+		TX73_004630	0.75	+1.2
1,003,088	-		TX73_004630	0.75	-0.9
1,003,099	+		TX73_004630	0.76	+0.1
1,003,118	-		TX73_004630	0.77	-0.7
1,003,178	-		TX73_004630	0.82	-0.2
1,003,193	+		TX73_004630	0.83	+0.2
1,003,227	+		TX73_004630	0.85	-0.5
1,003,227	+		TX73_004630	0.85	-1.7
1,003,227	+		TX73_004630	0.85	-0.0
1,003,227	+		TX73_004630	0.85	-0.4
1,003,227	+		TX73_004630	0.85	+0.3
1,003,229	+		TX73_004630	0.85	+0.0
1,003,235	-		TX73_004630	0.86	+2.0
1,003,235	-		TX73_004630	0.86	-0.1
1,003,235	-		TX73_004630	0.86	+0.6
1,003,235	-		TX73_004630	0.86	-1.3
1,003,261	-		TX73_004630	0.88	+0.7
1,003,277	-		TX73_004630	0.89	+0.0
1,003,333	-				+0.4
1,003,333	-				+0.3
1,003,354	-				+0.3
1,003,385	-				-0.7
1,003,410	+				-0.1
1,003,440	+				-0.5
1,003,449	+				+1.5
1,003,452	-				-1.0
1,003,457	+				-1.0
1,003,457	-				+0.3
1,003,457	-				+0.5
1,003,521	+				+0.2
1,003,628	-				+0.3
1,003,644	+				-0.8
1,003,662	+				+0.3
1,003,675	+				+0.1
1,003,678	-				-0.5
1,003,683	-				+0.4
1,003,700	-		TX73_004635	0.11	+1.5
1,003,700	-		TX73_004635	0.11	+0.6
1,003,703	+		TX73_004635	0.12	+0.1
1,003,705	-		TX73_004635	0.12	+0.6
1,003,711	-		TX73_004635	0.13	+0.5
1,003,724	-		TX73_004635	0.15	-0.1
1,003,779	+		TX73_004635	0.24	-0.4
1,003,779	+		TX73_004635	0.24	+0.4
1,003,779	+		TX73_004635	0.24	-1.5
1,003,787	-		TX73_004635	0.25	+0.2
1,003,787	-		TX73_004635	0.25	-0.0
1,003,787	-		TX73_004635	0.25	-0.7
1,003,803	+		TX73_004635	0.28	-0.0
1,003,811	-		TX73_004635	0.29	-1.2
1,003,811	-		TX73_004635	0.29	-0.6
1,003,811	-		TX73_004635	0.29	-0.4
1,003,812	+		TX73_004635	0.29	-0.2
1,003,813	-		TX73_004635	0.29	-0.1
1,003,817	+		TX73_004635	0.30	-2.1
1,003,822	+		TX73_004635	0.31	+0.1
1,003,825	-		TX73_004635	0.31	-0.2
1,003,829	+		TX73_004635	0.32	-0.0
1,003,830	-		TX73_004635	0.32	-1.1
1,003,830	-		TX73_004635	0.32	+0.9
1,003,851	+		TX73_004635	0.35	-0.7
1,003,852	+		TX73_004635	0.35	-0.9
1,003,860	-		TX73_004635	0.37	+0.2
1,003,874	+		TX73_004635	0.39	-0.4
1,003,874	+		TX73_004635	0.39	+1.1
1,003,874	+		TX73_004635	0.39	+0.3
1,003,879	+		TX73_004635	0.40	+0.2
1,003,879	-		TX73_004635	0.40	+0.4
1,003,892	-		TX73_004635	0.42	-1.3
1,003,906	+		TX73_004635	0.44	-0.8
1,003,943	+		TX73_004635	0.50	-0.2
1,003,943	+		TX73_004635	0.50	-1.2
1,003,951	-		TX73_004635	0.51	+0.1
1,003,952	+		TX73_004635	0.51	-0.3
1,003,952	-		TX73_004635	0.51	+0.0
1,003,968	+		TX73_004635	0.54	-0.5
1,004,001	+		TX73_004635	0.59	-0.4
1,004,002	+		TX73_004635	0.59	-0.5
1,004,002	-		TX73_004635	0.59	-0.1
1,004,004	-		TX73_004635	0.59	-0.4
1,004,010	-		TX73_004635	0.60	-0.2
1,004,017	+		TX73_004635	0.61	+0.4
1,004,065	-		TX73_004635	0.69	-0.8
1,004,105	-		TX73_004635	0.75	+0.9
1,004,119	+		TX73_004635	0.78	-0.5
1,004,119	+		TX73_004635	0.78	+0.7
1,004,119	+		TX73_004635	0.78	-0.1
1,004,123	+		TX73_004635	0.78	-0.1
1,004,127	-		TX73_004635	0.79	-1.2
1,004,127	-		TX73_004635	0.79	-1.7
1,004,149	+		TX73_004635	0.82	+0.7
1,004,183	+		TX73_004635	0.88	-1.2
1,004,183	+		TX73_004635	0.88	+0.0
1,004,183	+		TX73_004635	0.88	+0.4
1,004,194	+		TX73_004635	0.89	+0.9
1,004,196	-		TX73_004635	0.90	+1.0
1,004,207	-				-0.5
1,004,251	-				-0.0
1,004,256	-				+0.8
1,004,262	-				-0.1
1,004,262	-				+0.1
1,004,273	+				+0.5
1,004,281	-				+0.2
1,004,281	-				+0.2
1,004,283	-				-0.4
1,004,308	+				+0.1
1,004,316	-				+1.2
1,004,318	+				+0.7
1,004,323	+				-0.2
1,004,323	+				-0.6
1,004,331	-				-0.9
1,004,339	+				+0.8
1,004,359	+		TX73_004640	0.11	+0.2
1,004,367	-		TX73_004640	0.12	+0.2
1,004,369	-		TX73_004640	0.12	+0.2
1,004,371	+		TX73_004640	0.12	-0.3
1,004,377	-		TX73_004640	0.13	-0.4
1,004,420	-		TX73_004640	0.19	-0.3