Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04125

Experiment: mutant library grown in Supernatant; Rhizobium pusense TBS_045 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04124 and MPMX20_04125 overlap by 21 nucleotidesMPMX20_04125 and MPMX20_04126 are separated by 640 nucleotides MPMX20_04124: MPMX20_04124 - hypothetical protein, at 4,319,418 to 4,320,920 _04124 MPMX20_04125: MPMX20_04125 - hypothetical protein, at 4,320,900 to 4,321,883 _04125 MPMX20_04126: MPMX20_04126 - Glutamate synthase [NADPH] large chain, at 4,322,524 to 4,326,984 _04126 Position (kb) 4320 4321 4322Strain fitness (log2 ratio) -2 -1 0 1at 4319.937 kb on + strand, within MPMX20_04124at 4319.942 kb on + strand, within MPMX20_04124at 4319.959 kb on + strand, within MPMX20_04124at 4320.098 kb on + strand, within MPMX20_04124at 4320.105 kb on - strand, within MPMX20_04124at 4320.105 kb on - strand, within MPMX20_04124at 4320.116 kb on + strand, within MPMX20_04124at 4320.116 kb on + strand, within MPMX20_04124at 4320.124 kb on - strand, within MPMX20_04124at 4320.124 kb on - strand, within MPMX20_04124at 4320.153 kb on - strand, within MPMX20_04124at 4320.198 kb on - strand, within MPMX20_04124at 4320.200 kb on + strand, within MPMX20_04124at 4320.217 kb on + strand, within MPMX20_04124at 4320.238 kb on - strand, within MPMX20_04124at 4320.287 kb on - strand, within MPMX20_04124at 4320.349 kb on + strand, within MPMX20_04124at 4320.370 kb on + strand, within MPMX20_04124at 4320.391 kb on + strand, within MPMX20_04124at 4320.391 kb on + strand, within MPMX20_04124at 4320.391 kb on + strand, within MPMX20_04124at 4320.399 kb on - strand, within MPMX20_04124at 4320.405 kb on + strand, within MPMX20_04124at 4320.461 kb on - strand, within MPMX20_04124at 4320.482 kb on - strand, within MPMX20_04124at 4320.652 kb on - strand, within MPMX20_04124at 4320.690 kb on + strand, within MPMX20_04124at 4320.769 kb on + strand, within MPMX20_04124at 4320.777 kb on - strandat 4320.777 kb on - strandat 4320.777 kb on - strandat 4320.777 kb on - strandat 4320.777 kb on - strandat 4320.828 kb on + strandat 4320.828 kb on + strandat 4320.828 kb on + strandat 4320.836 kb on - strandat 4320.876 kb on + strandat 4320.876 kb on + strandat 4320.928 kb on + strandat 4320.936 kb on - strandat 4320.936 kb on - strandat 4320.936 kb on - strandat 4320.936 kb on - strandat 4320.953 kb on + strandat 4320.990 kb on + strandat 4321.025 kb on - strand, within MPMX20_04125at 4321.034 kb on + strand, within MPMX20_04125at 4321.174 kb on + strand, within MPMX20_04125at 4321.182 kb on - strand, within MPMX20_04125at 4321.205 kb on + strand, within MPMX20_04125at 4321.213 kb on - strand, within MPMX20_04125at 4321.235 kb on + strand, within MPMX20_04125at 4321.256 kb on - strand, within MPMX20_04125at 4321.300 kb on - strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.304 kb on + strand, within MPMX20_04125at 4321.312 kb on - strand, within MPMX20_04125at 4321.312 kb on - strand, within MPMX20_04125at 4321.312 kb on - strand, within MPMX20_04125at 4321.312 kb on - strand, within MPMX20_04125at 4321.312 kb on - strand, within MPMX20_04125at 4321.368 kb on + strand, within MPMX20_04125at 4321.384 kb on + strand, within MPMX20_04125at 4321.385 kb on - strand, within MPMX20_04125at 4321.385 kb on - strand, within MPMX20_04125at 4321.392 kb on - strand, within MPMX20_04125at 4321.420 kb on - strand, within MPMX20_04125at 4321.420 kb on - strand, within MPMX20_04125at 4321.426 kb on - strand, within MPMX20_04125at 4321.466 kb on - strand, within MPMX20_04125at 4321.490 kb on - strand, within MPMX20_04125at 4321.516 kb on - strand, within MPMX20_04125at 4321.554 kb on + strand, within MPMX20_04125at 4321.556 kb on - strand, within MPMX20_04125at 4321.562 kb on - strand, within MPMX20_04125at 4321.578 kb on + strand, within MPMX20_04125at 4321.617 kb on + strand, within MPMX20_04125at 4321.628 kb on - strand, within MPMX20_04125at 4321.665 kb on + strand, within MPMX20_04125at 4321.746 kb on + strand, within MPMX20_04125at 4321.779 kb on + strand, within MPMX20_04125at 4321.921 kb on + strandat 4321.928 kb on + strandat 4322.044 kb on + strandat 4322.044 kb on - strandat 4322.160 kb on - strandat 4322.160 kb on - strandat 4322.165 kb on + strandat 4322.165 kb on + strandat 4322.165 kb on + strandat 4322.183 kb on - strandat 4322.446 kb on - strandat 4322.453 kb on + strandat 4322.494 kb on + strandat 4322.503 kb on + strandat 4322.503 kb on + strandat 4322.504 kb on + strandat 4322.504 kb on + strandat 4322.542 kb on - strandat 4322.569 kb on - strandat 4322.588 kb on - strandat 4322.603 kb on + strandat 4322.770 kb on + strandat 4322.779 kb on - strandat 4322.868 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Rhizobium pusense TBS_045 grown in LB
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4,319,937 + MPMX20_04124 0.35 -0.4
4,319,942 + MPMX20_04124 0.35 -0.3
4,319,959 + MPMX20_04124 0.36 +0.1
4,320,098 + MPMX20_04124 0.45 +0.8
4,320,105 - MPMX20_04124 0.46 -0.5
4,320,105 - MPMX20_04124 0.46 +0.6
4,320,116 + MPMX20_04124 0.46 -0.6
4,320,116 + MPMX20_04124 0.46 +0.5
4,320,124 - MPMX20_04124 0.47 -1.0
4,320,124 - MPMX20_04124 0.47 +0.8
4,320,153 - MPMX20_04124 0.49 -0.2
4,320,198 - MPMX20_04124 0.52 -0.1
4,320,200 + MPMX20_04124 0.52 -0.6
4,320,217 + MPMX20_04124 0.53 -0.4
4,320,238 - MPMX20_04124 0.55 -0.0
4,320,287 - MPMX20_04124 0.58 +0.1
4,320,349 + MPMX20_04124 0.62 +0.0
4,320,370 + MPMX20_04124 0.63 -2.6
4,320,391 + MPMX20_04124 0.65 +0.1
4,320,391 + MPMX20_04124 0.65 -0.3
4,320,391 + MPMX20_04124 0.65 +0.4
4,320,399 - MPMX20_04124 0.65 +0.1
4,320,405 + MPMX20_04124 0.66 +0.9
4,320,461 - MPMX20_04124 0.69 +0.2
4,320,482 - MPMX20_04124 0.71 +0.2
4,320,652 - MPMX20_04124 0.82 -0.3
4,320,690 + MPMX20_04124 0.85 -0.5
4,320,769 + MPMX20_04124 0.90 +0.2
4,320,777 - +0.1
4,320,777 - +0.2
4,320,777 - -0.2
4,320,777 - -0.3
4,320,777 - +0.9
4,320,828 + +0.2
4,320,828 + -0.4
4,320,828 + +0.9
4,320,836 - +0.9
4,320,876 + -0.2
4,320,876 + +0.5
4,320,928 + +0.4
4,320,936 - -0.1
4,320,936 - -0.1
4,320,936 - +0.5
4,320,936 - -0.9
4,320,953 + +0.4
4,320,990 + +0.2
4,321,025 - MPMX20_04125 0.13 -1.5
4,321,034 + MPMX20_04125 0.14 -0.1
4,321,174 + MPMX20_04125 0.28 +0.0
4,321,182 - MPMX20_04125 0.29 -0.4
4,321,205 + MPMX20_04125 0.31 -0.1
4,321,213 - MPMX20_04125 0.32 +0.4
4,321,235 + MPMX20_04125 0.34 +0.6
4,321,256 - MPMX20_04125 0.36 -0.7
4,321,300 - MPMX20_04125 0.41 -0.3
4,321,304 + MPMX20_04125 0.41 +0.1
4,321,304 + MPMX20_04125 0.41 +0.3
4,321,304 + MPMX20_04125 0.41 -0.4
4,321,304 + MPMX20_04125 0.41 +0.9
4,321,304 + MPMX20_04125 0.41 +0.2
4,321,304 + MPMX20_04125 0.41 -0.6
4,321,304 + MPMX20_04125 0.41 +0.1
4,321,304 + MPMX20_04125 0.41 +0.7
4,321,304 + MPMX20_04125 0.41 -0.5
4,321,304 + MPMX20_04125 0.41 -0.4
4,321,312 - MPMX20_04125 0.42 +0.2
4,321,312 - MPMX20_04125 0.42 -0.7
4,321,312 - MPMX20_04125 0.42 -0.4
4,321,312 - MPMX20_04125 0.42 -1.8
4,321,312 - MPMX20_04125 0.42 -0.2
4,321,368 + MPMX20_04125 0.48 +0.2
4,321,384 + MPMX20_04125 0.49 +0.8
4,321,385 - MPMX20_04125 0.49 -0.5
4,321,385 - MPMX20_04125 0.49 -0.2
4,321,392 - MPMX20_04125 0.50 -0.4
4,321,420 - MPMX20_04125 0.53 -0.5
4,321,420 - MPMX20_04125 0.53 +0.8
4,321,426 - MPMX20_04125 0.53 -1.5
4,321,466 - MPMX20_04125 0.58 -0.3
4,321,490 - MPMX20_04125 0.60 +0.0
4,321,516 - MPMX20_04125 0.63 +0.8
4,321,554 + MPMX20_04125 0.66 +1.4
4,321,556 - MPMX20_04125 0.67 -0.0
4,321,562 - MPMX20_04125 0.67 -0.3
4,321,578 + MPMX20_04125 0.69 +0.1
4,321,617 + MPMX20_04125 0.73 +1.5
4,321,628 - MPMX20_04125 0.74 -0.5
4,321,665 + MPMX20_04125 0.78 -0.2
4,321,746 + MPMX20_04125 0.86 -0.4
4,321,779 + MPMX20_04125 0.89 -0.6
4,321,921 + -1.6
4,321,928 + -0.3
4,322,044 + -0.3
4,322,044 - -0.2
4,322,160 - -0.2
4,322,160 - +0.2
4,322,165 + +0.2
4,322,165 + -0.3
4,322,165 + +0.2
4,322,183 - -2.3
4,322,446 - +0.5
4,322,453 + +0.3
4,322,494 + +0.6
4,322,503 + -1.7
4,322,503 + +0.3
4,322,504 + -0.5
4,322,504 + +0.7
4,322,542 - -0.4
4,322,569 - -0.2
4,322,588 - -0.3
4,322,603 + -0.3
4,322,770 + -0.1
4,322,779 - +0.7
4,322,868 - +0.0

Or see this region's nucleotide sequence