Experiment: mutant library grown in Supernatant; Paenibacillus favisporus 004-C2 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03766 and MPMX20_03767 overlap by 4 nucleotides MPMX20_03767 and MPMX20_03768 are separated by 25 nucleotides MPMX20_03768 and MPMX20_03769 are separated by 161 nucleotides
MPMX20_03766: MPMX20_03766 - 2-octaprenyl-6-methoxyphenol hydroxylase, at 3,969,412 to 3,970,590
_03766
MPMX20_03767: MPMX20_03767 - Xaa-Pro aminopeptidase, at 3,970,587 to 3,971,906
_03767
MPMX20_03768: MPMX20_03768 - hypothetical protein, at 3,971,932 to 3,972,516
_03768
MPMX20_03769: MPMX20_03769 - Cell division protein ZapA, at 3,972,678 to 3,973,007
_03769
Position (kb)
3970
3971
3972 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3970.777 kb on - strand, within MPMX20_03767 at 3970.816 kb on + strand, within MPMX20_03767 at 3970.843 kb on - strand, within MPMX20_03767 at 3970.843 kb on - strand, within MPMX20_03767 at 3970.848 kb on - strand, within MPMX20_03767 at 3970.855 kb on - strand, within MPMX20_03767 at 3970.932 kb on - strand, within MPMX20_03767 at 3971.042 kb on - strand, within MPMX20_03767 at 3971.042 kb on - strand, within MPMX20_03767 at 3971.042 kb on - strand, within MPMX20_03767 at 3971.042 kb on - strand, within MPMX20_03767 at 3971.042 kb on - strand, within MPMX20_03767 at 3971.059 kb on - strand, within MPMX20_03767 at 3971.144 kb on - strand, within MPMX20_03767 at 3971.186 kb on - strand, within MPMX20_03767 at 3971.277 kb on - strand, within MPMX20_03767 at 3971.345 kb on - strand, within MPMX20_03767 at 3971.463 kb on - strand, within MPMX20_03767 at 3971.539 kb on - strand, within MPMX20_03767 at 3971.604 kb on - strand, within MPMX20_03767 at 3971.627 kb on - strand, within MPMX20_03767 at 3971.849 kb on - strand at 3971.918 kb on - strand at 3971.923 kb on - strand at 3972.087 kb on - strand, within MPMX20_03768 at 3972.090 kb on - strand, within MPMX20_03768 at 3972.092 kb on + strand, within MPMX20_03768 at 3972.100 kb on - strand, within MPMX20_03768 at 3972.100 kb on - strand, within MPMX20_03768 at 3972.100 kb on - strand, within MPMX20_03768 at 3972.100 kb on - strand, within MPMX20_03768 at 3972.192 kb on - strand, within MPMX20_03768 at 3972.218 kb on + strand, within MPMX20_03768 at 3972.233 kb on + strand, within MPMX20_03768 at 3972.233 kb on - strand, within MPMX20_03768 at 3972.241 kb on - strand, within MPMX20_03768 at 3972.311 kb on + strand, within MPMX20_03768 at 3972.311 kb on + strand, within MPMX20_03768 at 3972.311 kb on + strand, within MPMX20_03768 at 3972.319 kb on - strand, within MPMX20_03768 at 3972.319 kb on - strand, within MPMX20_03768 at 3972.344 kb on + strand, within MPMX20_03768 at 3972.407 kb on + strand, within MPMX20_03768 at 3972.407 kb on + strand, within MPMX20_03768 at 3972.408 kb on - strand, within MPMX20_03768 at 3972.436 kb on + strand, within MPMX20_03768 at 3972.436 kb on + strand, within MPMX20_03768 at 3972.444 kb on - strand, within MPMX20_03768 at 3972.444 kb on - strand, within MPMX20_03768 at 3972.444 kb on - strand, within MPMX20_03768 at 3972.444 kb on - strand, within MPMX20_03768 at 3972.444 kb on - strand, within MPMX20_03768 at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.501 kb on + strand at 3972.509 kb on - strand at 3972.509 kb on - strand at 3972.509 kb on - strand at 3972.509 kb on - strand at 3972.509 kb on - strand at 3972.509 kb on - strand at 3972.509 kb on - strand at 3972.566 kb on + strand at 3972.583 kb on + strand at 3972.604 kb on - strand at 3972.638 kb on - strand at 3972.650 kb on - strand at 3972.655 kb on + strand at 3972.672 kb on + strand at 3972.673 kb on - strand at 3972.692 kb on - strand at 3972.749 kb on - strand, within MPMX20_03769 at 3972.862 kb on + strand, within MPMX20_03769
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Paenibacillus favisporus 004-C2 grown in LB remove 3,970,777 - MPMX20_03767 0.14 -1.5 3,970,816 + MPMX20_03767 0.17 -1.3 3,970,843 - MPMX20_03767 0.19 -0.3 3,970,843 - MPMX20_03767 0.19 -1.0 3,970,848 - MPMX20_03767 0.20 -2.0 3,970,855 - MPMX20_03767 0.20 +0.1 3,970,932 - MPMX20_03767 0.26 -0.1 3,971,042 - MPMX20_03767 0.34 -1.3 3,971,042 - MPMX20_03767 0.34 -2.1 3,971,042 - MPMX20_03767 0.34 -2.1 3,971,042 - MPMX20_03767 0.34 -2.1 3,971,042 - MPMX20_03767 0.34 -0.5 3,971,059 - MPMX20_03767 0.36 -2.5 3,971,144 - MPMX20_03767 0.42 -1.1 3,971,186 - MPMX20_03767 0.45 -0.5 3,971,277 - MPMX20_03767 0.52 -0.9 3,971,345 - MPMX20_03767 0.57 -0.8 3,971,463 - MPMX20_03767 0.66 -0.4 3,971,539 - MPMX20_03767 0.72 -2.3 3,971,604 - MPMX20_03767 0.77 +0.2 3,971,627 - MPMX20_03767 0.79 -0.9 3,971,849 - -1.3 3,971,918 - -0.4 3,971,923 - +0.0 3,972,087 - MPMX20_03768 0.26 +0.6 3,972,090 - MPMX20_03768 0.27 -0.2 3,972,092 + MPMX20_03768 0.27 +0.2 3,972,100 - MPMX20_03768 0.29 -0.0 3,972,100 - MPMX20_03768 0.29 +0.2 3,972,100 - MPMX20_03768 0.29 -0.3 3,972,100 - MPMX20_03768 0.29 -0.3 3,972,192 - MPMX20_03768 0.44 +0.3 3,972,218 + MPMX20_03768 0.49 -0.1 3,972,233 + MPMX20_03768 0.51 -0.3 3,972,233 - MPMX20_03768 0.51 -0.7 3,972,241 - MPMX20_03768 0.53 -0.5 3,972,311 + MPMX20_03768 0.65 -0.9 3,972,311 + MPMX20_03768 0.65 -0.4 3,972,311 + MPMX20_03768 0.65 +2.5 3,972,319 - MPMX20_03768 0.66 +0.1 3,972,319 - MPMX20_03768 0.66 +0.2 3,972,344 + MPMX20_03768 0.70 -0.8 3,972,407 + MPMX20_03768 0.81 -0.6 3,972,407 + MPMX20_03768 0.81 -0.1 3,972,408 - MPMX20_03768 0.81 +0.2 3,972,436 + MPMX20_03768 0.86 -2.3 3,972,436 + MPMX20_03768 0.86 +0.1 3,972,444 - MPMX20_03768 0.88 -0.0 3,972,444 - MPMX20_03768 0.88 +0.1 3,972,444 - MPMX20_03768 0.88 +0.2 3,972,444 - MPMX20_03768 0.88 +2.1 3,972,444 - MPMX20_03768 0.88 +2.1 3,972,501 + -0.8 3,972,501 + -0.8 3,972,501 + +0.0 3,972,501 + +0.9 3,972,501 + +0.5 3,972,501 + +0.1 3,972,501 + +0.2 3,972,501 + +0.1 3,972,501 + +0.6 3,972,501 + -0.1 3,972,501 + +0.1 3,972,501 + -1.8 3,972,501 + -2.1 3,972,501 + -0.0 3,972,501 + +0.1 3,972,501 + +0.6 3,972,501 + +0.3 3,972,509 - +0.1 3,972,509 - +0.5 3,972,509 - +1.0 3,972,509 - -0.3 3,972,509 - +0.0 3,972,509 - -0.1 3,972,509 - -0.5 3,972,566 + +0.0 3,972,583 + +0.2 3,972,604 - +0.1 3,972,638 - -0.8 3,972,650 - +0.3 3,972,655 + +1.2 3,972,672 + +0.2 3,972,673 - -0.8 3,972,692 - +0.1 3,972,749 - MPMX20_03769 0.22 -0.2 3,972,862 + MPMX20_03769 0.56 +0.2
Or see this region's nucleotide sequence