Experiment: PM_argon75_N2O25 butyrate and Chloride 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_023105 and TX73_023110 overlap by 4 nucleotides TX73_023110 and TX73_023115 are separated by 278 nucleotides
TX73_023105: TX73_023105 - hypothetical protein, at 5,026,214 to 5,027,449
_023105
TX73_023110: TX73_023110 - pyridoxal-dependent decarboxylase, at 5,027,446 to 5,028,906
_023110
TX73_023115: TX73_023115 - TIGR00282 family metallophosphoesterase, at 5,029,185 to 5,030,012
_023115
Position (kb) 5027
5028
5029 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5026.611 kb on - strand, within TX73_023105 at 5026.781 kb on + strand, within TX73_023105 at 5026.795 kb on - strand, within TX73_023105 at 5027.083 kb on - strand, within TX73_023105 at 5027.138 kb on + strand, within TX73_023105 at 5027.209 kb on + strand, within TX73_023105 at 5027.268 kb on + strand, within TX73_023105 at 5027.294 kb on + strand, within TX73_023105 at 5027.350 kb on + strand at 5027.351 kb on - strand at 5027.351 kb on - strand at 5027.415 kb on + strand at 5027.429 kb on + strand at 5027.446 kb on - strand at 5027.616 kb on - strand, within TX73_023110 at 5027.655 kb on + strand, within TX73_023110 at 5027.962 kb on + strand, within TX73_023110 at 5028.022 kb on + strand, within TX73_023110 at 5028.037 kb on + strand, within TX73_023110 at 5028.040 kb on - strand, within TX73_023110 at 5028.044 kb on + strand, within TX73_023110 at 5028.045 kb on - strand, within TX73_023110 at 5028.066 kb on - strand, within TX73_023110 at 5028.321 kb on + strand, within TX73_023110 at 5028.329 kb on - strand, within TX73_023110 at 5028.402 kb on - strand, within TX73_023110 at 5028.546 kb on + strand, within TX73_023110 at 5028.577 kb on + strand, within TX73_023110 at 5028.625 kb on + strand, within TX73_023110 at 5028.631 kb on - strand, within TX73_023110 at 5028.633 kb on - strand, within TX73_023110 at 5028.633 kb on - strand, within TX73_023110 at 5028.746 kb on + strand, within TX73_023110 at 5028.933 kb on - strand at 5028.987 kb on - strand at 5029.032 kb on + strand at 5029.034 kb on + strand at 5029.034 kb on + strand at 5029.034 kb on + strand at 5029.034 kb on + strand at 5029.040 kb on - strand at 5029.150 kb on + strand at 5029.304 kb on - strand, within TX73_023115 at 5029.372 kb on + strand, within TX73_023115 at 5029.385 kb on - strand, within TX73_023115 at 5029.469 kb on + strand, within TX73_023115 at 5029.518 kb on - strand, within TX73_023115 at 5029.520 kb on + strand, within TX73_023115 at 5029.523 kb on - strand, within TX73_023115 at 5029.599 kb on + strand, within TX73_023115 at 5029.600 kb on - strand, within TX73_023115 at 5029.633 kb on + strand, within TX73_023115 at 5029.682 kb on + strand, within TX73_023115 at 5029.717 kb on - strand, within TX73_023115 at 5029.748 kb on - strand, within TX73_023115 at 5029.777 kb on + strand, within TX73_023115
Per-strain Table
Position Strand Gene LocusTag Fraction PM_argon75_N2O25 butyrate and Chloride 0.1 mM remove 5,026,611 - TX73_023105 0.32 +1.0 5,026,781 + TX73_023105 0.46 +1.0 5,026,795 - TX73_023105 0.47 -0.4 5,027,083 - TX73_023105 0.70 +0.5 5,027,138 + TX73_023105 0.75 -1.7 5,027,209 + TX73_023105 0.81 +0.4 5,027,268 + TX73_023105 0.85 +0.0 5,027,294 + TX73_023105 0.87 +4.5 5,027,350 + +3.0 5,027,351 - +1.4 5,027,351 - -0.7 5,027,415 + +0.0 5,027,429 + -1.6 5,027,446 - +1.4 5,027,616 - TX73_023110 0.12 -1.0 5,027,655 + TX73_023110 0.14 +0.6 5,027,962 + TX73_023110 0.35 -1.4 5,028,022 + TX73_023110 0.39 +0.6 5,028,037 + TX73_023110 0.40 +0.5 5,028,040 - TX73_023110 0.41 +0.6 5,028,044 + TX73_023110 0.41 -0.3 5,028,045 - TX73_023110 0.41 +0.0 5,028,066 - TX73_023110 0.42 -1.3 5,028,321 + TX73_023110 0.60 -1.3 5,028,329 - TX73_023110 0.60 +0.3 5,028,402 - TX73_023110 0.65 -0.1 5,028,546 + TX73_023110 0.75 +0.4 5,028,577 + TX73_023110 0.77 +0.2 5,028,625 + TX73_023110 0.81 -1.0 5,028,631 - TX73_023110 0.81 -2.2 5,028,633 - TX73_023110 0.81 +1.1 5,028,633 - TX73_023110 0.81 -1.0 5,028,746 + TX73_023110 0.89 -0.6 5,028,933 - +1.0 5,028,987 - -0.5 5,029,032 + +0.5 5,029,034 + -0.3 5,029,034 + +0.4 5,029,034 + +0.4 5,029,034 + +1.3 5,029,040 - +0.6 5,029,150 + +0.5 5,029,304 - TX73_023115 0.14 -0.3 5,029,372 + TX73_023115 0.23 -2.0 5,029,385 - TX73_023115 0.24 +1.1 5,029,469 + TX73_023115 0.34 -0.7 5,029,518 - TX73_023115 0.40 -0.7 5,029,520 + TX73_023115 0.40 -1.3 5,029,523 - TX73_023115 0.41 +0.0 5,029,599 + TX73_023115 0.50 +1.1 5,029,600 - TX73_023115 0.50 -0.5 5,029,633 + TX73_023115 0.54 +0.1 5,029,682 + TX73_023115 0.60 -1.4 5,029,717 - TX73_023115 0.64 +0.4 5,029,748 - TX73_023115 0.68 +0.8 5,029,777 + TX73_023115 0.71 +0.3
Or see this region's nucleotide sequence