Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_007875

Experiment: PM_argon75_N2O25 butyrate and Chloride 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM_argon75_N2O25 butyrate and Chloride 0.1 mM
1,698,674	-				-0.8
1,698,681	+				-0.6
1,698,752	+				+0.6
1,698,766	-				+0.6
1,698,766	-				-0.8
1,699,647	+				-1.1
1,699,655	+				+0.3
1,699,660	+				+0.4
1,699,668	-				-0.2
1,699,668	-				-1.0
1,699,690	+				-0.5
1,699,690	+				-0.3
1,699,699	-				-0.5
1,699,707	+				-1.4
1,699,709	-				+0.4
1,699,718	+				+0.2
1,699,728	+				+0.1
1,699,731	-				+0.1
1,699,736	-				-0.2
1,699,736	-				-0.8
1,699,741	-				-0.6
1,699,741	-				+0.6
1,699,743	+				-0.2
1,699,751	-				-0.4
1,699,775	+				-0.2
1,699,800	-		TX73_007875	0.12	+0.9
1,699,811	+		TX73_007875	0.13	-0.5
1,699,816	+		TX73_007875	0.13	-0.0
1,699,919	-		TX73_007875	0.21	-0.4
1,699,931	+		TX73_007875	0.22	+0.5
1,699,939	-		TX73_007875	0.22	-0.6
1,699,943	-		TX73_007875	0.23	-0.3
1,699,954	+		TX73_007875	0.23	-1.2
1,699,954	+		TX73_007875	0.23	-1.1
1,699,962	-		TX73_007875	0.24	-1.0
1,699,964	+		TX73_007875	0.24	-0.2
1,699,988	-		TX73_007875	0.26	-0.9
1,700,019	+		TX73_007875	0.28	-0.5
1,700,019	-		TX73_007875	0.28	+0.2
1,700,088	+		TX73_007875	0.34	-1.8
1,700,105	+		TX73_007875	0.35	-1.1
1,700,106	+		TX73_007875	0.35	+0.1
1,700,114	-		TX73_007875	0.36	-0.1
1,700,144	+		TX73_007875	0.38	+0.2
1,700,176	+		TX73_007875	0.40	-1.4
1,700,176	+		TX73_007875	0.40	+0.7
1,700,184	-		TX73_007875	0.41	-0.0
1,700,194	+		TX73_007875	0.42	+0.5
1,700,204	+		TX73_007875	0.42	-1.2
1,700,212	-		TX73_007875	0.43	+0.7
1,700,212	-		TX73_007875	0.43	-0.1
1,700,214	+		TX73_007875	0.43	+0.2
1,700,219	+		TX73_007875	0.44	+0.0
1,700,222	-		TX73_007875	0.44	-0.5
1,700,231	+		TX73_007875	0.44	-0.6
1,700,239	-		TX73_007875	0.45	+0.3
1,700,239	-		TX73_007875	0.45	-2.0
1,700,239	-		TX73_007875	0.45	-0.7
1,700,257	+		TX73_007875	0.46	-0.9
1,700,292	-		TX73_007875	0.49	-0.8
1,700,302	+		TX73_007875	0.50	+0.5
1,700,302	+		TX73_007875	0.50	+0.5
1,700,303	+		TX73_007875	0.50	+0.2
1,700,303	-		TX73_007875	0.50	-0.4
1,700,359	+		TX73_007875	0.54	-0.7
1,700,359	+		TX73_007875	0.54	+0.6
1,700,367	-		TX73_007875	0.55	-0.3
1,700,367	-		TX73_007875	0.55	+0.5
1,700,367	-		TX73_007875	0.55	-0.1
1,700,374	+		TX73_007875	0.55	-0.2
1,700,405	+		TX73_007875	0.58	-0.6
1,700,405	+		TX73_007875	0.58	+0.1
1,700,412	+		TX73_007875	0.58	-0.2
1,700,412	+		TX73_007875	0.58	-1.0
1,700,412	+		TX73_007875	0.58	-1.4
1,700,412	+		TX73_007875	0.58	-2.4
1,700,415	-		TX73_007875	0.58	-0.9
1,700,415	-		TX73_007875	0.58	-1.0
1,700,420	-		TX73_007875	0.59	+0.7
1,700,420	-		TX73_007875	0.59	-0.7
1,700,423	+		TX73_007875	0.59	+0.5
1,700,430	-		TX73_007875	0.60	-0.8
1,700,431	-		TX73_007875	0.60	-0.3
1,700,437	+		TX73_007875	0.60	-0.1
1,700,438	-		TX73_007875	0.60	+1.2
1,700,470	-		TX73_007875	0.63	-1.7
1,700,472	+		TX73_007875	0.63	+0.1
1,700,483	+		TX73_007875	0.64	-0.5
1,700,491	-		TX73_007875	0.64	+0.3
1,700,503	+		TX73_007875	0.65	-0.9
1,700,530	+		TX73_007875	0.67	-0.9
1,700,538	-		TX73_007875	0.68	-0.7
1,700,572	+		TX73_007875	0.70	+0.5
1,700,572	+		TX73_007875	0.70	-0.6
1,700,572	+		TX73_007875	0.70	+0.3
1,700,581	+		TX73_007875	0.71	-0.9
1,700,587	+		TX73_007875	0.71	+0.8
1,700,589	-		TX73_007875	0.72	+0.0
1,700,589	-		TX73_007875	0.72	-0.3
1,700,589	-		TX73_007875	0.72	+0.1
1,700,600	+		TX73_007875	0.72	-0.7
1,700,608	-		TX73_007875	0.73	+1.9
1,700,613	-		TX73_007875	0.73	-0.3
1,700,613	-		TX73_007875	0.73	-0.5
1,700,617	+		TX73_007875	0.74	-2.4
1,700,617	+		TX73_007875	0.74	-0.5
1,700,620	-		TX73_007875	0.74	+0.2
1,700,625	-		TX73_007875	0.74	-0.2
1,700,625	-		TX73_007875	0.74	-0.0
1,700,625	-		TX73_007875	0.74	-1.0
1,700,630	-		TX73_007875	0.75	+0.7
1,700,652	-		TX73_007875	0.76	-0.7
1,700,728	+		TX73_007875	0.82	-1.1
1,700,728	-		TX73_007875	0.82	-0.6
1,700,735	-		TX73_007875	0.83	+0.0
1,700,740	-		TX73_007875	0.83	-0.2
1,700,740	-		TX73_007875	0.83	+0.0
1,700,740	-		TX73_007875	0.83	-0.8
1,700,740	-		TX73_007875	0.83	+0.5
1,700,767	-		TX73_007875	0.85	-0.1
1,700,779	+		TX73_007875	0.86	+0.1
1,700,808	+		TX73_007875	0.88	-0.8
1,700,812	+		TX73_007875	0.89	+1.6
1,700,814	+		TX73_007875	0.89	-0.6
1,700,828	+		TX73_007875	0.90	-0.2
1,700,828	+		TX73_007875	0.90	+0.2
1,700,833	+				-0.7
1,700,833	+				-1.0
1,700,833	+				-0.2
1,700,836	-				-0.2
1,700,836	-				-1.8
1,700,838	+				+0.1
1,700,841	-				-0.8
1,700,841	-				-0.4
1,700,841	-				-0.9
1,700,894	+				-0.2
1,700,930	+				-0.5
1,700,950	+				+1.4
1,700,959	-				+0.1
1,701,068	+				+0.7
1,701,074	-				-1.2
1,701,081	-				-0.9
1,701,103	-		TX73_007880	0.12	-0.9
1,701,164	+		TX73_007880	0.17	-0.8
1,701,167	-		TX73_007880	0.17	-0.9
1,701,172	-		TX73_007880	0.17	-0.1
1,701,292	+		TX73_007880	0.27	-0.9
1,701,300	-		TX73_007880	0.28	+0.3
1,701,309	+		TX73_007880	0.29	+0.4
1,701,314	+		TX73_007880	0.29	-1.0
1,701,314	+		TX73_007880	0.29	-0.7
1,701,317	-		TX73_007880	0.29	+0.5
1,701,322	-		TX73_007880	0.30	-0.2
1,701,322	-		TX73_007880	0.30	-0.6
1,701,323	+		TX73_007880	0.30	-1.5
1,701,344	+		TX73_007880	0.32	+0.2
1,701,344	+		TX73_007880	0.32	-1.0
1,701,344	+		TX73_007880	0.32	-0.1
1,701,359	+		TX73_007880	0.33	-0.4
1,701,359	-		TX73_007880	0.33	+0.1
1,701,440	+		TX73_007880	0.39	-1.1
1,701,448	-		TX73_007880	0.40	-0.8
1,701,448	-		TX73_007880	0.40	-0.5
1,701,467	-		TX73_007880	0.42	-0.5
1,701,509	+		TX73_007880	0.45	-0.2
1,701,564	+		TX73_007880	0.50	+1.0
1,701,593	+		TX73_007880	0.52	-1.2
1,701,604	+		TX73_007880	0.53	-0.5
1,701,627	-		TX73_007880	0.55	-1.4
1,701,629	-		TX73_007880	0.55	-1.0
1,701,634	-		TX73_007880	0.56	-0.1
1,701,656	-		TX73_007880	0.57	-0.8
1,701,656	-		TX73_007880	0.57	-1.0
1,701,703	+		TX73_007880	0.61	-0.1
1,701,703	+		TX73_007880	0.61	+0.4
1,701,711	-		TX73_007880	0.62	+0.2
1,701,721	-		TX73_007880	0.63	-0.5
1,701,722	-		TX73_007880	0.63	-1.2
1,701,722	-		TX73_007880	0.63	-1.5
1,701,722	-		TX73_007880	0.63	-0.1
1,701,830	+		TX73_007880	0.72	-0.8
1,701,847	-		TX73_007880	0.73	-0.8
1,701,862	-		TX73_007880	0.74	-0.1
1,701,871	+		TX73_007880	0.75	-0.9
1,701,879	-		TX73_007880	0.76	-1.4
1,701,909	-		TX73_007880	0.78	-0.7