Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_005385

Experiment: PM_argon75_N2O25 butyrate and Chloride 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM_argon75_N2O25 butyrate and Chloride 0.1 mM
1,151,894	+				-0.4
1,151,902	-				-0.2
1,151,902	-				+0.5
1,151,925	+				+0.3
1,151,925	+				-0.1
1,151,933	-				+0.1
1,152,014	-				+0.4
1,152,056	+				+0.6
1,152,056	+				+0.6
1,152,093	+				-0.2
1,152,093	+				+0.0
1,152,101	-				+0.8
1,152,101	-				-0.5
1,152,125	-				+0.9
1,152,141	-				+0.3
1,152,154	+				+0.9
1,152,154	+				+0.5
1,152,156	+				-1.0
1,152,162	-				-0.3
1,152,164	-				+0.3
1,152,183	-				+0.2
1,152,191	-				-0.4
1,152,197	+				+0.6
1,152,197	+				+0.1
1,152,200	+				+0.3
1,152,205	-				-0.4
1,152,208	-				-1.2
1,152,221	+				+0.2
1,152,221	+				-0.2
1,152,304	+				-0.7
1,152,314	+				+0.4
1,152,385	-				-0.1
1,152,400	-				-0.1
1,152,400	-				+0.1
1,152,417	+				+1.0
1,152,420	+				+0.1
1,152,438	+				+0.2
1,152,455	+				+0.5
1,152,462	-				+0.3
1,152,470	-				+0.3
1,152,472	-				+1.0
1,152,473	-				-0.7
1,152,602	-				+0.6
1,152,620	+				+1.1
1,152,625	+				+0.2
1,152,628	-				-0.6
1,152,635	+				-2.1
1,152,635	+				+0.6
1,152,635	+				+0.4
1,152,635	+				+0.3
1,152,635	+				-0.5
1,152,635	+				-0.6
1,152,641	-				-1.2
1,152,643	-				-1.1
1,152,643	-				+0.0
1,152,643	-				-0.4
1,152,643	-				+0.8
1,152,643	-				+1.7
1,152,663	+				-0.3
1,152,687	+				-0.5
1,152,695	-				-0.8
1,152,752	-		TX73_005385	0.14	-1.0
1,152,755	+		TX73_005385	0.14	+0.9
1,152,763	-		TX73_005385	0.15	+0.2
1,152,847	-		TX73_005385	0.23	-0.3
1,152,934	-		TX73_005385	0.31	-0.6
1,152,934	-		TX73_005385	0.31	-1.0
1,152,937	+		TX73_005385	0.31	-0.5
1,152,974	+		TX73_005385	0.34	-1.5
1,152,976	+		TX73_005385	0.34	-0.2
1,152,997	-		TX73_005385	0.36	+0.1
1,153,004	+		TX73_005385	0.37	-0.2
1,153,004	+		TX73_005385	0.37	+0.6
1,153,004	+		TX73_005385	0.37	+0.6
1,153,012	-		TX73_005385	0.38	+0.1
1,153,012	-		TX73_005385	0.38	+0.4
1,153,012	-		TX73_005385	0.38	+0.6
1,153,012	-		TX73_005385	0.38	-1.5
1,153,012	-		TX73_005385	0.38	-0.5
1,153,012	-		TX73_005385	0.38	-1.0
1,153,014	+		TX73_005385	0.38	-1.5
1,153,019	+		TX73_005385	0.38	-1.0
1,153,022	-		TX73_005385	0.38	-0.6
1,153,055	+		TX73_005385	0.41	-0.4
1,153,055	+		TX73_005385	0.41	-0.2
1,153,055	+		TX73_005385	0.41	+0.4
1,153,063	-		TX73_005385	0.42	+0.3
1,153,063	-		TX73_005385	0.42	-0.6
1,153,067	+		TX73_005385	0.43	-1.7
1,153,067	+		TX73_005385	0.43	+0.3
1,153,112	+		TX73_005385	0.47	-0.6
1,153,116	-		TX73_005385	0.47	+0.6
1,153,119	+		TX73_005385	0.47	-0.5
1,153,134	+		TX73_005385	0.49	-0.1
1,153,146	+		TX73_005385	0.50	+0.2
1,153,161	-		TX73_005385	0.51	+1.0
1,153,161	-		TX73_005385	0.51	-0.2
1,153,171	-		TX73_005385	0.52	-0.6
1,153,290	+		TX73_005385	0.63	-0.6
1,153,295	+		TX73_005385	0.63	-0.1
1,153,360	-		TX73_005385	0.69	-0.6
1,153,389	+		TX73_005385	0.72	-0.6
1,153,406	-		TX73_005385	0.73	+0.3
1,153,418	+		TX73_005385	0.74	-0.9
1,153,518	+		TX73_005385	0.83	+0.3
1,153,526	-		TX73_005385	0.84	+0.8
1,153,529	+		TX73_005385	0.84	-0.9
1,153,538	-		TX73_005385	0.85	-0.6
1,153,561	+		TX73_005385	0.87	-0.6
1,153,569	-		TX73_005385	0.88	-0.1
1,153,571	+		TX73_005385	0.88	-0.4
1,153,579	-		TX73_005385	0.89	+0.3
1,153,597	-				-0.2
1,153,607	-				+0.3
1,153,647	+				+0.1
1,153,654	+				+0.2
1,153,662	-				-0.1
1,153,698	-				+0.3
1,153,771	+				+0.1
1,153,779	-				+0.2
1,153,793	-				+0.0
1,153,795	+				+0.5
1,153,795	+				-0.7
1,153,815	+				-0.2
1,153,827	-				-0.3
1,153,841	+				+0.4
1,153,866	-		TX73_005390	0.12	-0.1
1,153,876	-		TX73_005390	0.13	-0.0
1,153,911	+		TX73_005390	0.15	-0.1
1,153,919	-		TX73_005390	0.16	-0.6
1,153,921	-		TX73_005390	0.16	+0.9
1,153,932	+		TX73_005390	0.17	+0.2
1,153,967	+		TX73_005390	0.20	+0.6
1,153,994	+		TX73_005390	0.22	+0.7
1,153,994	+		TX73_005390	0.22	-0.1
1,153,994	+		TX73_005390	0.22	-0.6
1,154,002	-		TX73_005390	0.22	+0.3
1,154,002	-		TX73_005390	0.22	+0.4
1,154,002	-		TX73_005390	0.22	+0.7
1,154,002	-		TX73_005390	0.22	+0.2
1,154,005	+		TX73_005390	0.23	-0.2
1,154,029	+		TX73_005390	0.24	+1.0
1,154,029	+		TX73_005390	0.24	-0.2
1,154,029	+		TX73_005390	0.24	-0.7
1,154,079	+		TX73_005390	0.28	-0.2
1,154,124	+		TX73_005390	0.32	+1.7
1,154,125	+		TX73_005390	0.32	+1.4
1,154,125	+		TX73_005390	0.32	+0.0
1,154,152	-		TX73_005390	0.34	-0.4
1,154,201	+		TX73_005390	0.38	+0.1
1,154,209	-		TX73_005390	0.38	-0.2
1,154,220	+		TX73_005390	0.39	-0.1
1,154,235	+		TX73_005390	0.40	+0.1
1,154,243	-		TX73_005390	0.41	-0.6
1,154,260	+		TX73_005390	0.42	+0.5
1,154,270	-		TX73_005390	0.43	-0.6
1,154,284	+		TX73_005390	0.44	-0.3
1,154,322	+		TX73_005390	0.47	+0.6
1,154,336	+		TX73_005390	0.48	+1.6
1,154,339	+		TX73_005390	0.49	-0.0
1,154,368	-		TX73_005390	0.51	-0.6
1,154,370	+		TX73_005390	0.51	-0.6
1,154,370	+		TX73_005390	0.51	+0.0
1,154,378	-		TX73_005390	0.52	+0.6
1,154,378	-		TX73_005390	0.52	+1.2
1,154,400	+		TX73_005390	0.53	+0.2
1,154,410	+		TX73_005390	0.54	+0.1
1,154,414	+		TX73_005390	0.54	-0.7
1,154,422	-		TX73_005390	0.55	+0.3
1,154,422	-		TX73_005390	0.55	+1.0
1,154,422	-		TX73_005390	0.55	-0.4
1,154,426	+		TX73_005390	0.55	-0.2
1,154,445	-		TX73_005390	0.57	-0.1
1,154,447	+		TX73_005390	0.57	-0.1
1,154,455	-		TX73_005390	0.58	-0.1
1,154,463	+		TX73_005390	0.58	-0.7
1,154,468	+		TX73_005390	0.59	+0.2
1,154,471	-		TX73_005390	0.59	+0.4
1,154,473	-		TX73_005390	0.59	+0.2
1,154,476	-		TX73_005390	0.59	+0.1
1,154,512	+		TX73_005390	0.62	-0.2
1,154,514	+		TX73_005390	0.62	-0.7
1,154,520	-		TX73_005390	0.63	-0.1
1,154,567	+		TX73_005390	0.66	-0.1
1,154,570	+		TX73_005390	0.67	+0.3
1,154,575	-		TX73_005390	0.67	-0.1
1,154,602	+		TX73_005390	0.69	+0.1
1,154,635	-		TX73_005390	0.72	+1.0
1,154,645	-		TX73_005390	0.72	+0.6
1,154,645	-		TX73_005390	0.72	-0.4
1,154,645	-		TX73_005390	0.72	-0.5
1,154,645	-		TX73_005390	0.72	+0.8
1,154,650	-		TX73_005390	0.73	-0.1
1,154,650	-		TX73_005390	0.73	+0.6
1,154,674	+		TX73_005390	0.75	+0.5
1,154,698	-		TX73_005390	0.76	+0.5
1,154,698	-		TX73_005390	0.76	+0.5
1,154,698	-		TX73_005390	0.76	+0.3