Experiment: PM_argon75_N2O25 butyrate and Chloride 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_009150 and TX73_009155 are separated by 187 nucleotides TX73_009155 and TX73_009160 are separated by 338 nucleotides TX73_009160 and TX73_009165 are separated by 168 nucleotides
TX73_009150: TX73_009150 - DUF2848 domain-containing protein, at 1,994,374 to 1,995,060
_009150
TX73_009155: TX73_009155 - PaaI family thioesterase, at 1,995,248 to 1,995,697
_009155
TX73_009160: TX73_009160 - 4-hydroxybenzoate 3-monooxygenase, at 1,996,036 to 1,997,208
_009160
TX73_009165: TX73_009165 - TRAP transporter substrate-binding protein, at 1,997,377 to 1,998,387
_009165
Position (kb) 1996
1997
1998 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 1995.057 kb on - strand at 1995.089 kb on - strand at 1995.164 kb on - strand at 1995.209 kb on + strand at 1995.217 kb on - strand at 1995.266 kb on - strand at 1995.315 kb on + strand, within TX73_009155 at 1995.337 kb on + strand, within TX73_009155 at 1995.358 kb on + strand, within TX73_009155 at 1995.366 kb on - strand, within TX73_009155 at 1995.376 kb on + strand, within TX73_009155 at 1995.409 kb on - strand, within TX73_009155 at 1995.451 kb on + strand, within TX73_009155 at 1995.464 kb on + strand, within TX73_009155 at 1995.473 kb on - strand, within TX73_009155 at 1995.641 kb on + strand, within TX73_009155 at 1995.690 kb on + strand at 1995.730 kb on + strand at 1995.738 kb on - strand at 1995.738 kb on - strand at 1995.738 kb on - strand at 1995.783 kb on + strand at 1995.832 kb on + strand at 1995.928 kb on + strand at 1995.946 kb on - strand at 1996.065 kb on - strand at 1996.175 kb on + strand, within TX73_009160 at 1996.201 kb on - strand, within TX73_009160 at 1996.205 kb on - strand, within TX73_009160 at 1996.317 kb on - strand, within TX73_009160 at 1996.490 kb on - strand, within TX73_009160 at 1996.512 kb on - strand, within TX73_009160 at 1996.518 kb on - strand, within TX73_009160 at 1996.549 kb on - strand, within TX73_009160 at 1996.581 kb on + strand, within TX73_009160 at 1996.589 kb on - strand, within TX73_009160 at 1996.614 kb on + strand, within TX73_009160 at 1996.622 kb on - strand, within TX73_009160 at 1996.802 kb on - strand, within TX73_009160 at 1996.838 kb on + strand, within TX73_009160 at 1996.840 kb on + strand, within TX73_009160 at 1996.942 kb on + strand, within TX73_009160 at 1996.942 kb on + strand, within TX73_009160 at 1996.950 kb on - strand, within TX73_009160 at 1996.950 kb on - strand, within TX73_009160 at 1997.056 kb on + strand, within TX73_009160 at 1997.100 kb on - strand at 1997.166 kb on + strand at 1997.170 kb on + strand at 1997.276 kb on - strand at 1997.660 kb on - strand, within TX73_009165 at 1997.843 kb on - strand, within TX73_009165 at 1998.061 kb on - strand, within TX73_009165 at 1998.122 kb on - strand, within TX73_009165 at 1998.122 kb on - strand, within TX73_009165 at 1998.168 kb on + strand, within TX73_009165 at 1998.204 kb on + strand, within TX73_009165
Per-strain Table
Position Strand Gene LocusTag Fraction PM_argon75_N2O25 butyrate and Chloride 0.1 mM remove 1,995,057 - -0.1 1,995,089 - +0.1 1,995,164 - +0.3 1,995,209 + +1.2 1,995,217 - -0.1 1,995,266 - +0.8 1,995,315 + TX73_009155 0.15 -0.2 1,995,337 + TX73_009155 0.20 +0.2 1,995,358 + TX73_009155 0.24 +0.4 1,995,366 - TX73_009155 0.26 +0.6 1,995,376 + TX73_009155 0.28 -0.1 1,995,409 - TX73_009155 0.36 +0.4 1,995,451 + TX73_009155 0.45 -0.4 1,995,464 + TX73_009155 0.48 -0.5 1,995,473 - TX73_009155 0.50 -0.1 1,995,641 + TX73_009155 0.87 -0.1 1,995,690 + -1.7 1,995,730 + +0.0 1,995,738 - +0.1 1,995,738 - -0.6 1,995,738 - -0.3 1,995,783 + +1.5 1,995,832 + +1.0 1,995,928 + +0.0 1,995,946 - -0.8 1,996,065 - -0.1 1,996,175 + TX73_009160 0.12 -1.5 1,996,201 - TX73_009160 0.14 +0.9 1,996,205 - TX73_009160 0.14 +0.4 1,996,317 - TX73_009160 0.24 +0.1 1,996,490 - TX73_009160 0.39 +1.9 1,996,512 - TX73_009160 0.41 +0.8 1,996,518 - TX73_009160 0.41 -0.8 1,996,549 - TX73_009160 0.44 -0.3 1,996,581 + TX73_009160 0.46 +0.8 1,996,589 - TX73_009160 0.47 +4.7 1,996,614 + TX73_009160 0.49 -0.6 1,996,622 - TX73_009160 0.50 +0.3 1,996,802 - TX73_009160 0.65 -0.2 1,996,838 + TX73_009160 0.68 +0.1 1,996,840 + TX73_009160 0.69 -0.4 1,996,942 + TX73_009160 0.77 -0.5 1,996,942 + TX73_009160 0.77 -0.6 1,996,950 - TX73_009160 0.78 +0.0 1,996,950 - TX73_009160 0.78 +0.5 1,997,056 + TX73_009160 0.87 -0.7 1,997,100 - +2.6 1,997,166 + +1.0 1,997,170 + -0.6 1,997,276 - +1.0 1,997,660 - TX73_009165 0.28 +0.1 1,997,843 - TX73_009165 0.46 +0.2 1,998,061 - TX73_009165 0.68 -0.3 1,998,122 - TX73_009165 0.74 +0.8 1,998,122 - TX73_009165 0.74 +0.3 1,998,168 + TX73_009165 0.78 -0.4 1,998,204 + TX73_009165 0.82 +0.6
Or see this region's nucleotide sequence