Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_007695

Experiment: PM_argon75_N2O25 butyrate and Chloride 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM_argon75_N2O25 butyrate and Chloride 0.1 mM
1,659,403	-		TX73_007690	0.58	+0.8
1,659,427	+		TX73_007690	0.60	+0.1
1,659,485	-		TX73_007690	0.63	-0.4
1,659,487	+		TX73_007690	0.64	+1.0
1,659,487	+		TX73_007690	0.64	-1.1
1,659,487	+		TX73_007690	0.64	+0.7
1,659,487	+		TX73_007690	0.64	-0.9
1,659,490	-		TX73_007690	0.64	+0.7
1,659,495	-		TX73_007690	0.64	-0.7
1,659,495	-		TX73_007690	0.64	+0.6
1,659,495	-		TX73_007690	0.64	+0.2
1,659,506	+		TX73_007690	0.65	+0.1
1,659,506	+		TX73_007690	0.65	+0.0
1,659,511	+		TX73_007690	0.65	+0.9
1,659,513	-		TX73_007690	0.65	-1.2
1,659,513	-		TX73_007690	0.65	+0.1
1,659,522	+		TX73_007690	0.66	-0.4
1,659,530	-		TX73_007690	0.66	+1.3
1,659,576	-		TX73_007690	0.69	+0.2
1,659,589	-		TX73_007690	0.70	+0.5
1,659,600	-		TX73_007690	0.71	-0.8
1,659,626	-		TX73_007690	0.73	+0.1
1,659,626	-		TX73_007690	0.73	-0.2
1,659,639	-		TX73_007690	0.73	-0.0
1,659,672	-		TX73_007690	0.76	+0.5
1,659,753	+		TX73_007690	0.81	+0.4
1,659,769	-		TX73_007690	0.82	-0.3
1,659,794	+		TX73_007690	0.83	-0.1
1,659,799	+		TX73_007690	0.84	-0.2
1,659,807	+		TX73_007690	0.84	+1.5
1,659,815	-		TX73_007690	0.85	+0.0
1,659,815	-		TX73_007690	0.85	-0.3
1,659,857	+		TX73_007690	0.88	-0.1
1,659,872	+		TX73_007690	0.89	-0.5
1,659,877	+		TX73_007690	0.89	-0.9
1,659,898	+				+1.1
1,659,898	+				+0.7
1,659,906	-				-0.8
1,659,911	+				-0.3
1,659,911	-				-0.3
1,659,919	-				-0.4
1,659,932	-				+0.9
1,659,932	-				+0.4
1,659,939	-				-0.6
1,659,962	+				+0.7
1,659,962	-				-0.2
1,659,970	-				-0.6
1,659,971	+				+1.9
1,659,972	+				+0.4
1,659,972	+				-0.1
1,659,972	+				-0.1
1,659,972	+				+2.6
1,659,979	+				+0.5
1,659,980	-				-0.0
1,660,022	-				-0.3
1,660,034	+				-1.6
1,660,042	+				+0.2
1,660,052	-				+0.1
1,660,069	-				-0.9
1,660,073	-				-0.2
1,660,075	-				-0.5
1,660,097	+				+0.5
1,660,097	+				-0.9
1,660,104	-				-0.8
1,660,124	+				+0.0
1,660,151	+				-0.2
1,660,151	+				-0.5
1,660,153	+				+0.0
1,660,169	+				-0.4
1,660,175	+				+0.3
1,660,193	-				+0.7
1,660,193	-				-1.1
1,660,193	-				-0.6
1,660,230	+				-0.2
1,660,238	-				+0.0
1,660,238	-				-0.7
1,660,256	+				-0.5
1,660,256	+				-0.7
1,660,264	-				-0.3
1,660,358	-				+0.0
1,660,370	+				+1.0
1,660,383	-				-1.0
1,660,414	+				+0.2
1,660,416	-				+0.8
1,660,418	+				-0.5
1,660,423	+				+0.1
1,660,497	-				+0.5
1,660,539	+		TX73_007695	0.11	+0.2
1,660,591	-		TX73_007695	0.16	+2.6
1,660,622	+		TX73_007695	0.18	+0.2
1,660,625	-		TX73_007695	0.18	+1.0
1,660,631	-		TX73_007695	0.19	-1.1
1,660,633	+		TX73_007695	0.19	+1.8
1,660,638	+		TX73_007695	0.20	-0.4
1,660,641	+		TX73_007695	0.20	+1.2
1,660,641	+		TX73_007695	0.20	-0.6
1,660,641	+		TX73_007695	0.20	+0.8
1,660,641	-		TX73_007695	0.20	+1.5
1,660,643	+		TX73_007695	0.20	+0.6
1,660,651	-		TX73_007695	0.21	+0.0
1,660,651	-		TX73_007695	0.21	+0.4
1,660,660	+		TX73_007695	0.21	+0.5
1,660,660	+		TX73_007695	0.21	-0.6
1,660,668	-		TX73_007695	0.22	+0.5
1,660,676	+		TX73_007695	0.23	+0.2
1,660,701	+		TX73_007695	0.25	+0.4
1,660,701	+		TX73_007695	0.25	+0.1
1,660,709	-		TX73_007695	0.26	+0.3
1,660,710	-		TX73_007695	0.26	-0.5
1,660,715	-		TX73_007695	0.26	+0.3
1,660,715	-		TX73_007695	0.26	-0.0
1,660,715	-		TX73_007695	0.26	+0.0
1,660,724	+		TX73_007695	0.27	+0.2
1,660,738	+		TX73_007695	0.28	+0.5
1,660,738	+		TX73_007695	0.28	+1.0
1,660,738	+		TX73_007695	0.28	+0.2
1,660,738	+		TX73_007695	0.28	+0.4
1,660,738	+		TX73_007695	0.28	+0.6
1,660,738	+		TX73_007695	0.28	+1.3
1,660,744	+		TX73_007695	0.28	+0.7
1,660,744	+		TX73_007695	0.28	+0.3
1,660,744	+		TX73_007695	0.28	+0.1
1,660,744	+		TX73_007695	0.28	-0.2
1,660,744	+		TX73_007695	0.28	+0.1
1,660,746	-		TX73_007695	0.29	+0.9
1,660,746	-		TX73_007695	0.29	-0.7
1,660,752	-		TX73_007695	0.29	+0.5
1,660,752	-		TX73_007695	0.29	-0.9
1,660,752	-		TX73_007695	0.29	+0.5
1,660,755	+		TX73_007695	0.29	+0.5
1,660,767	-		TX73_007695	0.30	-0.6
1,660,796	-		TX73_007695	0.33	+0.2
1,660,860	-		TX73_007695	0.38	-0.8
1,660,860	-		TX73_007695	0.38	+1.2
1,660,900	+		TX73_007695	0.41	-0.9
1,660,908	-		TX73_007695	0.42	-0.2
1,660,954	-		TX73_007695	0.46	-0.3
1,660,956	+		TX73_007695	0.46	+0.3
1,660,956	+		TX73_007695	0.46	+0.1
1,660,956	+		TX73_007695	0.46	-0.3
1,660,964	-		TX73_007695	0.47	+0.3
1,660,969	-		TX73_007695	0.47	+0.9
1,660,974	-		TX73_007695	0.48	-0.5
1,660,988	+		TX73_007695	0.49	+0.5
1,660,988	-		TX73_007695	0.49	-0.2
1,660,993	+		TX73_007695	0.49	-1.7
1,660,996	-		TX73_007695	0.49	-0.2
1,660,996	-		TX73_007695	0.49	+0.0
1,660,996	-		TX73_007695	0.49	+0.6
1,660,996	-		TX73_007695	0.49	+1.1
1,661,015	-		TX73_007695	0.51	+0.4
1,661,035	+		TX73_007695	0.53	+0.5
1,661,035	+		TX73_007695	0.53	+0.4
1,661,035	+		TX73_007695	0.53	+0.1
1,661,035	+		TX73_007695	0.53	+0.2
1,661,043	-		TX73_007695	0.53	+0.1
1,661,045	+		TX73_007695	0.54	+0.4
1,661,062	+		TX73_007695	0.55	-0.6
1,661,062	+		TX73_007695	0.55	+0.2
1,661,075	-		TX73_007695	0.56	-0.1
1,661,077	+		TX73_007695	0.56	-0.7
1,661,103	+		TX73_007695	0.58	+0.2
1,661,111	-		TX73_007695	0.59	+0.5
1,661,140	+		TX73_007695	0.61	-0.2
1,661,146	-		TX73_007695	0.62	-0.6
1,661,156	+		TX73_007695	0.63	+0.6
1,661,166	+		TX73_007695	0.64	+0.3
1,661,166	+		TX73_007695	0.64	-1.1
1,661,166	+		TX73_007695	0.64	-0.7
1,661,183	+		TX73_007695	0.65	-0.2
1,661,185	+		TX73_007695	0.65	+0.5
1,661,188	+		TX73_007695	0.65	-0.2
1,661,233	-		TX73_007695	0.69	-0.6
1,661,240	+		TX73_007695	0.70	+0.0
1,661,248	-		TX73_007695	0.70	-0.6
1,661,266	+		TX73_007695	0.72	+0.1
1,661,293	+		TX73_007695	0.74	-0.4
1,661,295	-		TX73_007695	0.74	-0.1
1,661,295	-		TX73_007695	0.74	+0.4
1,661,350	-		TX73_007695	0.79	+0.2
1,661,364	+		TX73_007695	0.80	+0.0
1,661,374	-		TX73_007695	0.81	-0.7
1,661,410	+		TX73_007695	0.84	-0.1
1,661,413	-		TX73_007695	0.84	+0.0
1,661,414	+		TX73_007695	0.84	-0.0
1,661,419	+		TX73_007695	0.85	+1.3
1,661,420	-		TX73_007695	0.85	-1.1
1,661,422	-		TX73_007695	0.85	+0.3
1,661,429	+		TX73_007695	0.85	+0.3
1,661,429	+		TX73_007695	0.85	+0.0
1,661,432	-		TX73_007695	0.86	-0.8
1,661,440	+		TX73_007695	0.86	-0.2
1,661,451	-		TX73_007695	0.87	-0.2
1,661,460	+		TX73_007695	0.88	+0.4
1,661,512	+				+0.4
1,661,516	-				-0.1
1,661,518	-				+0.3
1,661,528	-				-1.1
1,661,573	+				+0.6
1,661,640	+				-1.5
1,661,671	-				+0.1
1,661,699	+				-0.5
1,661,732	+				-0.2
1,661,762	-				-0.5
1,661,781	+				+0.0
1,661,781	+				-0.4
1,661,781	+				-0.8
1,661,789	-				+0.8
1,661,789	-				+0.2
1,661,789	-				+0.7
1,661,789	-				-0.7
1,661,794	+				-1.1
1,661,812	-				-0.2
1,661,822	-				-0.2
1,661,854	+				-0.8
1,661,854	+				+0.1
1,661,858	+				+0.4
1,661,862	-				+0.4
1,661,931	+		TX73_007700	0.10	+0.7
1,661,931	+		TX73_007700	0.10	-0.6
1,661,961	+		TX73_007700	0.11	+1.1
1,661,969	-		TX73_007700	0.11	+0.0
1,661,976	+		TX73_007700	0.11	-1.1
1,661,976	+		TX73_007700	0.11	-0.3
1,661,989	-		TX73_007700	0.12	-0.4
1,662,009	-		TX73_007700	0.12	-0.7
1,662,026	-		TX73_007700	0.13	+0.4
1,662,038	+		TX73_007700	0.13	+0.9
1,662,046	-		TX73_007700	0.14	-2.0
1,662,089	-		TX73_007700	0.15	-0.1
1,662,131	-		TX73_007700	0.16	-0.4
1,662,131	-		TX73_007700	0.16	+0.4
1,662,143	+		TX73_007700	0.17	+0.6
1,662,151	-		TX73_007700	0.17	-0.5
1,662,151	-		TX73_007700	0.17	+0.5
1,662,151	-		TX73_007700	0.17	+0.0
1,662,151	-		TX73_007700	0.17	-1.9
1,662,162	+		TX73_007700	0.17	+0.5
1,662,185	-		TX73_007700	0.18	-0.2
1,662,204	-		TX73_007700	0.19	+1.4
1,662,271	+		TX73_007700	0.21	-0.8
1,662,279	-		TX73_007700	0.21	-0.3
1,662,291	+		TX73_007700	0.21	+0.3
1,662,291	+		TX73_007700	0.21	-0.2
1,662,291	+		TX73_007700	0.21	+0.9
1,662,291	+		TX73_007700	0.21	+0.1
1,662,298	-		TX73_007700	0.22	+0.9
1,662,299	-		TX73_007700	0.22	-0.6
1,662,299	-		TX73_007700	0.22	+0.1
1,662,301	+		TX73_007700	0.22	-0.3
1,662,337	-		TX73_007700	0.23	-1.1
1,662,355	+		TX73_007700	0.23	-0.1
1,662,355	+		TX73_007700	0.23	+0.2
1,662,355	+		TX73_007700	0.23	-0.2
1,662,357	+		TX73_007700	0.23	+0.2
1,662,382	+		TX73_007700	0.24	-1.7
1,662,390	-		TX73_007700	0.25	-1.0
1,662,390	-		TX73_007700	0.25	+0.2
1,662,390	-		TX73_007700	0.25	-0.8
1,662,413	+		TX73_007700	0.25	-0.1
1,662,430	+		TX73_007700	0.26	+0.8
1,662,474	+		TX73_007700	0.27	-2.4
1,662,491	-		TX73_007700	0.28	-1.1
1,662,515	-		TX73_007700	0.28	+1.9
1,662,528	+		TX73_007700	0.29	+2.9
1,662,536	-		TX73_007700	0.29	-1.2
1,662,571	+		TX73_007700	0.30	-0.8
1,662,588	+		TX73_007700	0.31	+0.7
1,662,596	-		TX73_007700	0.31	+0.5