Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_015760

Experiment: PM_argon75_N2O25 butyrate and Chloride 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM_argon75_N2O25 butyrate and Chloride 0.1 mM
3,447,034	-		TX73_015755	0.16	-0.5
3,447,034	-		TX73_015755	0.16	+0.2
3,447,038	+		TX73_015755	0.16	-1.1
3,447,046	-		TX73_015755	0.17	+1.9
3,447,046	-		TX73_015755	0.17	+1.2
3,447,066	+		TX73_015755	0.19	+0.4
3,447,066	+		TX73_015755	0.19	+0.5
3,447,085	+		TX73_015755	0.20	+0.9
3,447,096	-		TX73_015755	0.21	-0.1
3,447,111	+		TX73_015755	0.23	+1.3
3,447,158	+		TX73_015755	0.27	+0.6
3,447,166	+		TX73_015755	0.27	+2.6
3,447,174	-		TX73_015755	0.28	+2.3
3,447,181	-		TX73_015755	0.28	+1.9
3,447,191	+		TX73_015755	0.29	+0.1
3,447,191	+		TX73_015755	0.29	+0.9
3,447,217	+		TX73_015755	0.32	+1.7
3,447,233	-		TX73_015755	0.33	-1.4
3,447,236	+		TX73_015755	0.33	+0.2
3,447,239	-		TX73_015755	0.33	+0.0
3,447,239	-		TX73_015755	0.33	+1.3
3,447,275	+		TX73_015755	0.36	+0.7
3,447,275	+		TX73_015755	0.36	-0.6
3,447,275	+		TX73_015755	0.36	-0.7
3,447,283	-		TX73_015755	0.37	+1.4
3,447,283	-		TX73_015755	0.37	+0.4
3,447,283	-		TX73_015755	0.37	+1.8
3,447,283	-		TX73_015755	0.37	-0.1
3,447,331	+		TX73_015755	0.41	-0.2
3,447,348	+		TX73_015755	0.43	+1.0
3,447,368	+		TX73_015755	0.44	-0.3
3,447,375	+		TX73_015755	0.45	+0.4
3,447,376	-		TX73_015755	0.45	+1.0
3,447,387	+		TX73_015755	0.46	-0.2
3,447,387	+		TX73_015755	0.46	+0.9
3,447,392	-		TX73_015755	0.46	-0.1
3,447,393	+		TX73_015755	0.46	-0.3
3,447,394	+		TX73_015755	0.47	+1.2
3,447,421	-		TX73_015755	0.49	+1.2
3,447,424	+		TX73_015755	0.49	-1.6
3,447,424	+		TX73_015755	0.49	-0.7
3,447,433	-		TX73_015755	0.50	+1.8
3,447,434	+		TX73_015755	0.50	+0.6
3,447,434	-		TX73_015755	0.50	+1.7
3,447,442	-		TX73_015755	0.51	+2.3
3,447,467	+		TX73_015755	0.53	-0.3
3,447,469	+		TX73_015755	0.53	+0.8
3,447,475	-		TX73_015755	0.53	+0.1
3,447,484	-		TX73_015755	0.54	+0.5
3,447,486	+		TX73_015755	0.54	+0.4
3,447,520	+		TX73_015755	0.57	-0.3
3,447,528	-		TX73_015755	0.58	+0.1
3,447,561	-		TX73_015755	0.61	+0.3
3,447,592	-		TX73_015755	0.63	+1.8
3,447,607	-		TX73_015755	0.65	-0.8
3,447,637	+		TX73_015755	0.67	+1.3
3,447,637	+		TX73_015755	0.67	+2.1
3,447,645	-		TX73_015755	0.68	+1.3
3,447,645	-		TX73_015755	0.68	-0.3
3,447,652	+		TX73_015755	0.68	+0.9
3,447,679	+		TX73_015755	0.71	+0.3
3,447,679	+		TX73_015755	0.71	+0.8
3,447,684	+		TX73_015755	0.71	-0.3
3,447,684	+		TX73_015755	0.71	-1.5
3,447,684	+		TX73_015755	0.71	+1.4
3,447,684	+		TX73_015755	0.71	+1.3
3,447,687	-		TX73_015755	0.71	+0.7
3,447,735	+		TX73_015755	0.75	-1.4
3,447,757	-		TX73_015755	0.77	-0.0
3,447,768	+		TX73_015755	0.78	+0.2
3,447,776	-		TX73_015755	0.79	+0.8
3,447,783	+		TX73_015755	0.80	+0.3
3,447,820	-		TX73_015755	0.83	+2.1
3,447,832	+		TX73_015755	0.84	-0.3
3,447,839	+		TX73_015755	0.84	+0.2
3,447,919	+				+1.0
3,447,934	-				-0.2
3,447,968	+				-0.1
3,447,971	-				-0.1
3,447,971	-				-0.8
3,447,984	+				+0.7
3,448,036	+				-0.6
3,448,044	-				+0.1
3,448,065	+				+1.2
3,448,112	-				-0.3
3,448,141	-		TX73_015760	0.13	+0.3
3,448,141	-		TX73_015760	0.13	+0.1
3,448,141	-		TX73_015760	0.13	-0.9
3,448,170	+		TX73_015760	0.16	-0.5
3,448,187	+		TX73_015760	0.18	+0.6
3,448,194	+		TX73_015760	0.19	+0.5
3,448,196	+		TX73_015760	0.19	+0.5
3,448,211	+		TX73_015760	0.21	-0.0
3,448,211	+		TX73_015760	0.21	+1.8
3,448,298	-		TX73_015760	0.30	-0.0
3,448,299	-		TX73_015760	0.30	+1.0
3,448,318	+		TX73_015760	0.32	+1.3
3,448,330	-		TX73_015760	0.34	+0.5
3,448,345	+		TX73_015760	0.35	-0.2
3,448,345	+		TX73_015760	0.35	-0.3
3,448,345	+		TX73_015760	0.35	+0.1
3,448,353	-		TX73_015760	0.36	+0.3
3,448,387	+		TX73_015760	0.40	+0.5
3,448,388	-		TX73_015760	0.40	-0.1
3,448,393	+		TX73_015760	0.40	+1.6
3,448,394	-		TX73_015760	0.40	-0.1
3,448,419	-		TX73_015760	0.43	+0.5
3,448,441	-		TX73_015760	0.46	+0.7
3,448,458	+		TX73_015760	0.47	-0.3
3,448,516	-		TX73_015760	0.54	+0.4
3,448,517	+		TX73_015760	0.54	+0.3
3,448,611	+		TX73_015760	0.64	+0.1
3,448,619	-		TX73_015760	0.65	+1.2
3,448,686	+		TX73_015760	0.72	-0.0
3,448,726	-		TX73_015760	0.76	-0.8
3,448,735	+		TX73_015760	0.77	+0.6
3,448,743	+		TX73_015760	0.78	-0.2
3,448,743	-		TX73_015760	0.78	+0.1
3,448,743	-		TX73_015760	0.78	+0.4
3,448,764	+		TX73_015760	0.81	+0.5
3,448,764	+		TX73_015760	0.81	+0.3
3,448,771	-		TX73_015760	0.81	+0.0
3,448,772	-		TX73_015760	0.81	-0.5
3,448,803	-		TX73_015760	0.85	+0.6
3,448,803	-		TX73_015760	0.85	+0.6
3,448,851	-				+0.5
3,448,851	-				+0.7
3,448,861	-				+0.1
3,448,861	-				-0.2
3,448,861	-				+0.2
3,448,866	-				+0.1
3,448,932	+				+0.2
3,448,945	-				-0.7
3,448,989	-				-1.0
3,449,136	+		TX73_015765	0.11	-0.3
3,449,139	-		TX73_015765	0.12	-0.7
3,449,144	-		TX73_015765	0.12	-0.0
3,449,293	-		TX73_015765	0.22	-1.7
3,449,294	+		TX73_015765	0.22	-0.3
3,449,351	+		TX73_015765	0.26	-1.9
3,449,359	-		TX73_015765	0.26	-0.3
3,449,382	+		TX73_015765	0.28	-0.1
3,449,414	+		TX73_015765	0.30	-0.7
3,449,440	-		TX73_015765	0.32	-0.0
3,449,515	-		TX73_015765	0.37	+0.1
3,449,524	+		TX73_015765	0.37	-1.1
3,449,529	+		TX73_015765	0.37	-0.5
3,449,532	-		TX73_015765	0.38	-0.2
3,449,547	-		TX73_015765	0.39	-0.3
3,449,601	-		TX73_015765	0.42	+0.1
3,449,685	-		TX73_015765	0.48	-1.3
3,449,781	+		TX73_015765	0.54	-1.3
3,449,786	+		TX73_015765	0.55	-0.4
3,449,789	-		TX73_015765	0.55	-1.5
3,449,826	-		TX73_015765	0.57	-0.4
3,449,881	+		TX73_015765	0.61	-0.3
3,449,881	+		TX73_015765	0.61	-0.5
3,449,881	+		TX73_015765	0.61	-0.8
3,449,881	+		TX73_015765	0.61	-1.4
3,449,881	+		TX73_015765	0.61	+0.3
3,449,889	-		TX73_015765	0.61	-0.5
3,449,889	-		TX73_015765	0.61	-0.5
3,449,889	-		TX73_015765	0.61	+0.3
3,449,889	-		TX73_015765	0.61	-2.0