Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021695

Experiment: PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
4,726,460	+				+2.3
4,726,468	-				+1.4
4,726,496	+				+3.2
4,726,545	+				+3.2
4,726,612	+				+3.9
4,726,614	+				+2.6
4,726,622	-				+0.6
4,726,644	+				+1.4
4,726,644	+				+1.4
4,726,644	+				+1.3
4,726,644	+				+1.4
4,726,644	+				+1.1
4,726,644	+				+1.7
4,726,644	+				+1.4
4,726,644	+				+1.3
4,726,652	-				-1.0
4,726,652	-				-0.5
4,726,652	-				+0.8
4,726,652	-				+0.3
4,726,652	-				-1.3
4,726,652	-				+0.5
4,726,652	-				-0.1
4,726,689	+		TX73_021685	0.22	+1.5
4,726,705	+		TX73_021685	0.32	+0.3
4,726,713	-		TX73_021685	0.37	-0.0
4,726,733	+		TX73_021685	0.50	+1.2
4,726,741	-		TX73_021685	0.56	+0.4
4,726,743	-		TX73_021685	0.57	+0.4
4,726,743	-		TX73_021685	0.57	+0.4
4,726,748	-		TX73_021685	0.60	+0.9
4,726,756	+		TX73_021685	0.65	+2.2
4,726,756	+		TX73_021685	0.65	+2.1
4,726,756	+		TX73_021685	0.65	+2.1
4,726,797	-				-0.1
4,726,799	+				+3.3
4,726,805	-				+0.4
4,726,875	-				-0.2
4,726,940	+				+0.0
4,726,948	-				+0.1
4,726,948	-				-0.4
4,726,959	+				-0.1
4,726,967	+				-0.3
4,726,981	+				-1.1
4,727,039	+				-0.4
4,727,041	-				+0.3
4,727,052	-				-0.1
4,727,105	+		TX73_021690	0.10	-0.4
4,727,109	+		TX73_021690	0.13	-0.4
4,727,113	-		TX73_021690	0.15	-0.1
4,727,130	-		TX73_021690	0.25	-0.0
4,727,131	-		TX73_021690	0.26	+0.5
4,727,161	-		TX73_021690	0.44	-0.3
4,727,167	-		TX73_021690	0.48	-0.5
4,727,167	-		TX73_021690	0.48	-0.1
4,727,178	+		TX73_021690	0.55	-0.6
4,727,178	+		TX73_021690	0.55	-0.0
4,727,178	+		TX73_021690	0.55	+0.3
4,727,186	-		TX73_021690	0.59	+0.3
4,727,186	-		TX73_021690	0.59	-0.4
4,727,188	+		TX73_021690	0.61	+0.9
4,727,191	-		TX73_021690	0.62	+0.8
4,727,283	+				+0.4
4,727,296	-				-0.2
4,727,297	+				+0.7
4,727,318	-				+0.1
4,727,323	-				-0.1
4,727,333	-				+0.1
4,727,343	+				+0.1
4,727,436	-				-0.6
4,727,436	-				+0.5
4,727,457	-				+0.3
4,727,458	+				-0.2
4,727,460	+				+0.2
4,727,468	-				+0.6
4,727,470	+				-0.4
4,727,471	+				+0.2
4,727,525	-		TX73_021695	0.12	-0.2
4,727,570	-		TX73_021695	0.15	-0.3
4,727,573	+		TX73_021695	0.15	-0.1
4,727,622	+		TX73_021695	0.18	+0.8
4,727,625	-		TX73_021695	0.18	-0.6
4,727,639	-		TX73_021695	0.18	+0.2
4,727,675	-		TX73_021695	0.20	-0.3
4,727,719	-		TX73_021695	0.23	-0.4
4,727,721	-		TX73_021695	0.23	-0.2
4,727,727	+		TX73_021695	0.23	-0.1
4,727,728	+		TX73_021695	0.23	+0.1
4,727,740	+		TX73_021695	0.24	-0.0
4,727,746	+		TX73_021695	0.24	+0.0
4,727,760	-		TX73_021695	0.25	+1.0
4,727,771	+		TX73_021695	0.25	+0.4
4,727,788	-		TX73_021695	0.26	+0.5
4,727,800	-		TX73_021695	0.27	+0.4
4,727,807	-		TX73_021695	0.27	+0.1
4,727,921	+		TX73_021695	0.33	+0.4
4,727,941	+		TX73_021695	0.34	+0.3
4,727,949	-		TX73_021695	0.35	+1.1
4,727,955	-		TX73_021695	0.35	-0.0
4,727,965	-		TX73_021695	0.35	+0.5
4,727,965	-		TX73_021695	0.35	+0.2
4,727,986	-		TX73_021695	0.37	-0.5
4,727,986	-		TX73_021695	0.37	+0.2
4,727,990	-		TX73_021695	0.37	+0.2
4,728,097	-		TX73_021695	0.42	+0.2
4,728,112	-		TX73_021695	0.43	-0.1
4,728,112	-		TX73_021695	0.43	-0.4
4,728,112	-		TX73_021695	0.43	+0.3
4,728,112	-		TX73_021695	0.43	+0.3
4,728,172	+		TX73_021695	0.46	-0.0
4,728,208	+		TX73_021695	0.48	+0.0
4,728,208	+		TX73_021695	0.48	+0.2
4,728,216	-		TX73_021695	0.49	+0.1
4,728,259	+		TX73_021695	0.51	-0.3
4,728,326	+		TX73_021695	0.54	+0.2
4,728,326	+		TX73_021695	0.54	-0.6
4,728,326	+		TX73_021695	0.54	+0.4
4,728,334	-		TX73_021695	0.55	-0.0
4,728,334	-		TX73_021695	0.55	-0.4
4,728,334	-		TX73_021695	0.55	+0.5
4,728,334	-		TX73_021695	0.55	+0.1
4,728,334	-		TX73_021695	0.55	-0.4
4,728,394	-		TX73_021695	0.58	+0.2
4,728,401	-		TX73_021695	0.58	-2.2
4,728,423	-		TX73_021695	0.59	+0.5
4,728,426	+		TX73_021695	0.59	+0.2
4,728,426	+		TX73_021695	0.59	+0.1
4,728,428	-		TX73_021695	0.60	+0.8
4,728,428	-		TX73_021695	0.60	+0.3
4,728,432	+		TX73_021695	0.60	+0.6
4,728,465	-		TX73_021695	0.62	+0.1
4,728,465	-		TX73_021695	0.62	-1.0
4,728,473	+		TX73_021695	0.62	-0.6
4,728,512	+		TX73_021695	0.64	+0.4
4,728,552	+		TX73_021695	0.66	+0.5
4,728,604	-		TX73_021695	0.69	+1.0
4,728,625	-		TX73_021695	0.70	+0.5
4,728,628	+		TX73_021695	0.70	+0.2
4,728,628	+		TX73_021695	0.70	-0.8
4,728,628	+		TX73_021695	0.70	+0.1
4,728,631	-		TX73_021695	0.70	+0.1
4,728,636	-		TX73_021695	0.70	-0.2
4,728,646	-		TX73_021695	0.71	+0.3
4,728,646	-		TX73_021695	0.71	-0.1
4,728,688	+		TX73_021695	0.73	+0.5
4,728,690	+		TX73_021695	0.73	+0.2
4,728,690	+		TX73_021695	0.73	+0.2
4,728,690	+		TX73_021695	0.73	+0.6
4,728,690	+		TX73_021695	0.73	+0.5
4,728,690	+		TX73_021695	0.73	-0.6
4,728,696	-		TX73_021695	0.74	-0.8
4,728,696	-		TX73_021695	0.74	+0.2
4,728,732	+		TX73_021695	0.75	+0.2
4,728,793	-		TX73_021695	0.79	+0.2
4,728,830	-		TX73_021695	0.81	-0.5
4,728,830	-		TX73_021695	0.81	+0.7
4,728,833	+		TX73_021695	0.81	+0.5
4,728,835	-		TX73_021695	0.81	+1.0
4,728,838	+		TX73_021695	0.81	-0.4
4,728,876	+		TX73_021695	0.83	+0.1
4,728,876	+		TX73_021695	0.83	+0.7
4,728,902	+		TX73_021695	0.84	+0.3
4,728,922	-		TX73_021695	0.85	+0.6
4,728,924	+		TX73_021695	0.85	+0.7
4,728,984	+		TX73_021695	0.89	-0.1
4,729,009	-		TX73_021695	0.90	-1.0
4,729,023	+				+0.6
4,729,031	-				+0.0
4,729,077	-				+0.7
4,729,082	-				-0.2
4,729,093	+				-0.3
4,729,093	+				-0.5
4,729,118	+				+0.3
4,729,118	+				+0.3
4,729,126	-				-0.4
4,729,131	-				+0.1
4,729,133	+				-0.2
4,729,133	+				+0.1
4,729,133	+				-0.1
4,729,133	+				+0.9
4,729,133	+				-0.7
4,729,135	+				+0.1
4,729,141	-				-0.4
4,729,141	-				+0.4
4,729,141	-				+0.6
4,729,141	-				-0.2
4,729,146	-				+0.0
4,729,155	+				+0.8
4,729,156	-				-0.3
4,729,192	+				-0.4
4,729,236	-				+0.0
4,729,246	+				-0.8
4,729,275	-				-0.1
4,729,287	-				+0.3
4,729,287	-				+0.2
4,729,307	-				+0.3
4,729,307	-				+0.4
4,729,307	-				-0.5
4,729,313	+				-0.1
4,729,318	+				-0.4
4,729,331	-				+0.1
4,729,342	-				-0.4
4,729,346	-				+0.2
4,729,356	+				+0.1
4,729,356	+				-0.4
4,729,356	+				-0.2
4,729,366	-				+0.2
4,729,368	+				-0.1
4,729,420	-				-0.4
4,729,429	+				-0.0
4,729,429	+				+0.1
4,729,429	+				-0.1
4,729,429	+				+0.2
4,729,429	+				+0.0
4,729,437	-				+0.5
4,729,437	-				+0.7
4,729,437	-				-0.1
4,729,437	-				+0.3
4,729,447	-				-0.1
4,729,451	+				+0.0
4,729,454	-				+0.5
4,729,471	+				-0.2
4,729,471	+				+0.0
4,729,471	+				-1.0
4,729,471	+				+0.1
4,729,471	+				-0.5
4,729,471	+				+0.3
4,729,471	+				-0.9
4,729,471	+				+1.4
4,729,471	+				-0.9
4,729,471	+				-0.3
4,729,471	+				+0.5
4,729,471	+				-0.3
4,729,471	+				-0.4
4,729,471	+				-0.6
4,729,471	+				-0.4
4,729,471	+				-0.3
4,729,471	+				-0.3
4,729,479	-				+0.2
4,729,479	-				+0.1
4,729,479	-				-0.4
4,729,479	-				+0.1
4,729,479	-				-0.0
4,729,479	-				+0.1
4,729,479	-				+0.5
4,729,479	-				-0.8
4,729,479	-				-0.5
4,729,479	-				+0.1
4,729,479	-				+0.4
4,729,479	-				+0.2
4,729,479	-				+0.4
4,729,479	-				-0.0
4,729,479	-				-0.7
4,729,479	-				+0.5
4,729,479	-				+0.1
4,729,479	-				-0.4
4,729,479	-				-0.4
4,729,498	+				-0.6
4,729,498	+				+0.5
4,729,498	+				-0.1
4,729,498	+				+0.1
4,729,498	+				+0.4
4,729,498	+				-0.0
4,729,506	-				-0.7
4,729,506	-				-0.1
4,729,506	-				+0.3
4,729,506	-				+0.8
4,729,506	-				+0.8
4,729,512	-				-0.7
4,729,530	+				+0.1
4,729,559	-				+0.4
4,729,561	-				+0.9
4,729,595	+				+0.4
4,729,601	-				+0.5
4,729,603	-				-0.3
4,729,615	+				+0.0
4,729,622	+				+0.3
4,729,629	-				+0.6
4,729,635	+		TX73_021700	0.11	+0.2
4,729,672	-		TX73_021700	0.16	-0.8
4,729,675	+		TX73_021700	0.17	+1.0
4,729,683	-		TX73_021700	0.18	-0.4
4,729,698	-		TX73_021700	0.20	-0.8
4,729,700	-		TX73_021700	0.21	+0.5
4,729,700	-		TX73_021700	0.21	+0.1
4,729,705	+		TX73_021700	0.22	+0.4
4,729,710	+		TX73_021700	0.22	+0.1
4,729,710	+		TX73_021700	0.22	-0.4
4,729,710	+		TX73_021700	0.22	+0.5
4,729,713	-		TX73_021700	0.23	-0.1
4,729,713	-		TX73_021700	0.23	+0.4
4,729,718	-		TX73_021700	0.24	+0.5
4,729,745	-		TX73_021700	0.28	-0.3
4,729,754	+		TX73_021700	0.29	+1.1
4,729,754	+		TX73_021700	0.29	+0.3
4,729,759	+		TX73_021700	0.30	+0.7
4,729,762	+		TX73_021700	0.31	-0.0
4,729,762	-		TX73_021700	0.31	-1.2
4,729,762	-		TX73_021700	0.31	-0.6
4,729,764	+		TX73_021700	0.31	-0.5
4,729,769	+		TX73_021700	0.32	-0.2
4,729,788	+		TX73_021700	0.35	+0.1
4,729,789	-		TX73_021700	0.35	-0.8
4,729,822	+		TX73_021700	0.40	+0.6
4,729,889	+		TX73_021700	0.50	-0.3
4,729,897	-		TX73_021700	0.52	-0.1
4,729,916	-		TX73_021700	0.55	-0.0
4,729,918	+		TX73_021700	0.55	-0.1
4,729,918	+		TX73_021700	0.55	-0.7
4,729,919	+		TX73_021700	0.55	+0.1
4,729,924	+		TX73_021700	0.56	-0.6
4,729,926	-		TX73_021700	0.56	+0.1
4,729,926	-		TX73_021700	0.56	-0.3
4,729,927	-		TX73_021700	0.56	-0.0
4,729,948	-		TX73_021700	0.60	-0.4
4,729,948	-		TX73_021700	0.60	+0.1
4,729,973	-		TX73_021700	0.64	-0.4
4,729,984	+		TX73_021700	0.65	+0.6
4,729,990	+		TX73_021700	0.66	-0.7
4,729,999	-		TX73_021700	0.68	-0.2
4,730,050	-		TX73_021700	0.76	+0.5
4,730,059	+		TX73_021700	0.77	+0.3
4,730,067	-		TX73_021700	0.78	+0.2
4,730,067	-		TX73_021700	0.78	-0.2
4,730,090	-		TX73_021700	0.82	-0.1
4,730,112	-		TX73_021700	0.86	+0.5
4,730,126	-		TX73_021700	0.88	+0.9
4,730,163	+				-0.8
4,730,174	+				+0.3
4,730,182	-				+0.1