Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS16675

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
3,625,423	-		ABIE51_RS16665	0.75	-0.0
3,626,159	+				-0.5
3,626,159	+				-1.5
3,626,160	-				-0.6
3,626,188	-				+0.2
3,626,408	-		ABIE51_RS16675	0.58	-1.1
3,626,443	+		ABIE51_RS16675	0.66	-1.0
3,626,444	-		ABIE51_RS16675	0.66	-0.2
3,626,444	-		ABIE51_RS16675	0.66	-0.3
3,626,444	-		ABIE51_RS16675	0.66	+0.8
3,626,449	+		ABIE51_RS16675	0.68	-0.1
3,626,450	-		ABIE51_RS16675	0.68	-0.0
3,626,450	-		ABIE51_RS16675	0.68	-0.3
3,626,509	+		ABIE51_RS16675	0.82	-1.3
3,626,509	+		ABIE51_RS16675	0.82	-0.4
3,626,509	+		ABIE51_RS16675	0.82	-1.0
3,626,509	+		ABIE51_RS16675	0.82	-0.5
3,626,510	-		ABIE51_RS16675	0.83	-0.4
3,626,510	-		ABIE51_RS16675	0.83	-0.5
3,626,510	-		ABIE51_RS16675	0.83	+1.0
3,626,510	-		ABIE51_RS16675	0.83	-0.9
3,626,644	-				-0.4
3,627,114	+		ABIE51_RS16680	0.76	+0.8
3,627,114	+		ABIE51_RS16680	0.76	-0.2
3,627,114	+		ABIE51_RS16680	0.76	+0.7
3,627,114	+		ABIE51_RS16680	0.76	+2.0
3,627,114	+		ABIE51_RS16680	0.76	+0.3
3,627,168	+		ABIE51_RS16680	0.84	-0.2
3,627,168	+		ABIE51_RS16680	0.84	+1.0
3,627,168	+		ABIE51_RS16680	0.84	+0.2
3,627,168	+		ABIE51_RS16680	0.84	+2.1
3,627,168	+		ABIE51_RS16680	0.84	+0.1
3,627,169	-		ABIE51_RS16680	0.84	-0.1
3,627,169	-		ABIE51_RS16680	0.84	-1.4
3,627,169	-		ABIE51_RS16680	0.84	+1.2
3,627,169	-		ABIE51_RS16680	0.84	+0.5
3,627,169	-		ABIE51_RS16680	0.84	-0.5
3,627,255	+				+0.5
3,627,255	+				+0.4
3,627,256	-				-0.5
3,627,256	-				-1.2
3,627,491	-		ABIE51_RS16685	0.12	+0.0