Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS16395

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
3,562,369	-		ABIE51_RS16385	0.79	-0.1
3,562,369	-		ABIE51_RS16385	0.79	-0.1
3,562,383	+		ABIE51_RS16385	0.81	+0.3
3,562,383	+		ABIE51_RS16385	0.81	-0.6
3,562,384	-		ABIE51_RS16385	0.81	-0.3
3,562,474	+				+0.3
3,562,475	-				-0.1
3,562,475	-				+0.6
3,563,222	-				+0.0
3,563,815	+		ABIE51_RS16395	0.44	-0.6
3,563,816	-		ABIE51_RS16395	0.44	-2.0
3,564,232	+		ABIE51_RS16395	0.78	+2.0
3,564,233	-		ABIE51_RS16395	0.78	-0.3
3,564,481	+				+1.0
3,564,527	+				+0.7
3,564,531	+				+0.6
3,564,531	+				-0.7
3,564,531	+				+0.0
3,564,722	+				+0.7
3,564,722	+				+1.0
3,564,723	-				+1.2
3,564,729	+				-0.4
3,564,729	+				+0.1
3,564,729	+				-0.1
3,564,730	-				+0.1
3,564,730	-				+1.0
3,564,730	-				+0.4
3,564,730	-				-0.3
3,564,954	-		ABIE51_RS16400	0.23	-2.2
3,564,974	+		ABIE51_RS16400	0.25	-0.2
3,564,974	+		ABIE51_RS16400	0.25	+0.1
3,564,974	+		ABIE51_RS16400	0.25	+0.3
3,564,974	+		ABIE51_RS16400	0.25	+0.6
3,564,974	+		ABIE51_RS16400	0.25	+0.1
3,564,980	+		ABIE51_RS16400	0.25	-0.2
3,564,980	+		ABIE51_RS16400	0.25	-0.2
3,564,980	+		ABIE51_RS16400	0.25	+0.2
3,564,980	+		ABIE51_RS16400	0.25	-0.9
3,564,980	+		ABIE51_RS16400	0.25	+0.0
3,564,980	+		ABIE51_RS16400	0.25	+0.0
3,564,981	-		ABIE51_RS16400	0.26	-0.6
3,564,981	-		ABIE51_RS16400	0.26	-0.6
3,564,981	-		ABIE51_RS16400	0.26	-0.5
3,564,981	-		ABIE51_RS16400	0.26	+0.4
3,565,016	+		ABIE51_RS16400	0.29	+0.8
3,565,169	+		ABIE51_RS16400	0.45	-0.1
3,565,233	-		ABIE51_RS16400	0.52	+0.7
3,565,281	-		ABIE51_RS16400	0.57	+0.3
3,565,281	-		ABIE51_RS16400	0.57	+0.3
3,565,281	-		ABIE51_RS16400	0.57	-0.1