Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15865

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
3,441,842	+		ABIE51_RS15860	0.33	+0.3
3,441,843	-		ABIE51_RS15860	0.33	-0.5
3,441,971	+		ABIE51_RS15860	0.46	+0.9
3,441,971	+		ABIE51_RS15860	0.46	-0.2
3,442,031	+		ABIE51_RS15860	0.52	-0.6
3,442,031	+		ABIE51_RS15860	0.52	-0.4
3,442,031	+		ABIE51_RS15860	0.52	-0.3
3,442,032	-		ABIE51_RS15860	0.52	-0.2
3,442,032	-		ABIE51_RS15860	0.52	-0.8
3,442,409	+				+0.2
3,442,409	+				-1.4
3,442,410	-				-0.5
3,442,410	-				-1.6
3,442,410	-				-0.4
3,442,660	+				-0.0
3,442,795	-		ABIE51_RS15865	0.14	-0.0
3,443,334	+		ABIE51_RS15865	0.66	-1.1
3,443,554	+		ABIE51_RS15865	0.87	-0.2
3,443,585	-		ABIE51_RS15865	0.90	-0.8
3,443,940	+		ABIE51_RS15870	0.33	-1.0
3,443,940	+		ABIE51_RS15870	0.33	-2.0
3,444,046	-		ABIE51_RS15870	0.48	-1.2
3,444,187	-		ABIE51_RS15870	0.68	-0.5
3,444,187	-		ABIE51_RS15870	0.68	-0.8
3,444,204	+		ABIE51_RS15870	0.71	-0.4
3,444,408	+				-0.2
3,444,408	+				+0.1
3,444,408	+				+0.8
3,444,409	-				-0.1
3,444,409	-				-0.2
3,444,650	-				-0.4