Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15855

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
3,439,121	+		ABIE51_RS15850	0.40	-0.7
3,439,122	-		ABIE51_RS15850	0.40	-1.3
3,439,122	-		ABIE51_RS15850	0.40	+0.2
3,439,158	+		ABIE51_RS15850	0.43	-1.1
3,439,159	-		ABIE51_RS15850	0.44	+0.1
3,439,223	+		ABIE51_RS15850	0.50	-0.3
3,439,467	-		ABIE51_RS15850	0.75	-0.9
3,439,678	+				-0.6
3,439,691	+				-1.5
3,439,691	+				-0.3
3,439,705	-				-0.3
3,439,817	+				-1.4
3,439,817	+				-0.2
3,439,818	-				-0.0
3,439,818	-				-1.6
3,439,820	-				-0.3
3,439,835	+				-1.6
3,439,836	-				+0.1
3,439,988	-				-1.3
3,441,202	+		ABIE51_RS15855	0.81	-1.1
3,441,202	+		ABIE51_RS15855	0.81	-0.3
3,441,203	-		ABIE51_RS15855	0.81	-1.3
3,441,203	-		ABIE51_RS15855	0.81	-0.3
3,441,499	+				+0.7
3,441,500	-				-0.3
3,441,842	+		ABIE51_RS15860	0.33	+0.3
3,441,843	-		ABIE51_RS15860	0.33	-0.5
3,441,971	+		ABIE51_RS15860	0.46	+0.9
3,441,971	+		ABIE51_RS15860	0.46	-0.2
3,442,031	+		ABIE51_RS15860	0.52	-0.6
3,442,031	+		ABIE51_RS15860	0.52	-0.4
3,442,031	+		ABIE51_RS15860	0.52	-0.3
3,442,032	-		ABIE51_RS15860	0.52	-0.2
3,442,032	-		ABIE51_RS15860	0.52	-0.8
3,442,409	+				+0.2
3,442,409	+				-1.4
3,442,410	-				-0.5
3,442,410	-				-1.6
3,442,410	-				-0.4