Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15035

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
3,263,002	+				-0.8
3,263,002	+				+1.8
3,263,002	+				+0.9
3,263,076	+				+0.4
3,263,076	+				-0.3
3,263,076	+				-0.3
3,263,076	+				+0.3
3,263,076	+				+0.7
3,263,077	-				+1.2
3,263,077	-				+0.3
3,263,077	-				-0.3
3,263,183	+				+0.4
3,263,184	-				+0.4
3,263,184	-				+0.7
3,263,215	+				+0.2
3,263,215	+				-0.2
3,263,216	-				+0.2
3,263,216	-				-0.2
3,263,286	+				+0.2
3,263,286	+				+0.1
3,263,286	+				-0.1
3,263,287	-				-0.3
3,263,287	-				+0.1
3,263,614	+		ABIE51_RS15030	0.56	-0.9
3,263,614	+		ABIE51_RS15030	0.56	-0.6
3,263,615	-		ABIE51_RS15030	0.56	-1.0
3,263,651	-		ABIE51_RS15030	0.64	-0.3
3,263,890	+				-0.3
3,264,072	+				-0.1
3,264,072	+				-2.2
3,264,073	-				-1.8
3,264,073	-				-0.3
3,264,150	+		ABIE51_RS15035	0.15	-0.8
3,264,150	+		ABIE51_RS15035	0.15	-0.5
3,264,151	-		ABIE51_RS15035	0.15	-1.6
3,264,186	+		ABIE51_RS15035	0.17	+0.2
3,264,186	+		ABIE51_RS15035	0.17	-1.5
3,264,187	-		ABIE51_RS15035	0.17	-0.8
3,264,187	-		ABIE51_RS15035	0.17	-0.7
3,264,414	+		ABIE51_RS15035	0.32	-0.3
3,264,589	-		ABIE51_RS15035	0.44	-1.0
3,264,612	+		ABIE51_RS15035	0.45	+0.1
3,264,612	+		ABIE51_RS15035	0.45	-1.2
3,264,612	+		ABIE51_RS15035	0.45	-0.6
3,264,612	+		ABIE51_RS15035	0.45	-1.4
3,264,613	-		ABIE51_RS15035	0.46	+0.8
3,264,670	-		ABIE51_RS15035	0.49	-2.6
3,264,796	-		ABIE51_RS15035	0.58	+1.1
3,265,011	+		ABIE51_RS15035	0.72	-1.4
3,265,011	+		ABIE51_RS15035	0.72	-0.7
3,265,012	-		ABIE51_RS15035	0.72	-0.5
3,265,012	-		ABIE51_RS15035	0.72	-1.1
3,265,012	-		ABIE51_RS15035	0.72	-1.9
3,265,524	+				-0.2
3,265,525	-				+0.5
3,265,525	-				+0.3
3,265,797	-				-0.1
3,265,797	-				+0.5
3,266,042	+		ABIE51_RS15040	0.33	-0.0
3,266,042	+		ABIE51_RS15040	0.33	-0.3
3,266,297	+		ABIE51_RS15040	0.58	+0.1
3,266,297	+		ABIE51_RS15040	0.58	+0.3
3,266,298	-		ABIE51_RS15040	0.58	-0.8
3,266,298	-		ABIE51_RS15040	0.58	-0.4
3,266,298	-		ABIE51_RS15040	0.58	+1.8
3,266,298	-		ABIE51_RS15040	0.58	+0.8
3,266,322	-		ABIE51_RS15040	0.60	+0.3
3,266,347	+		ABIE51_RS15040	0.62	+0.3