Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS13095

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
2,819,128	+				+0.1
2,819,129	-				+0.2
2,819,129	-				+1.9
2,819,149	+				+0.2
2,819,149	+				+1.1
2,819,150	-				-1.0
2,819,165	+				+0.2
2,819,168	+				-0.3
2,819,168	+				-1.0
2,819,168	+				+0.2
2,819,169	-				+0.9
2,819,169	-				+0.6
2,819,356	+		ABIE51_RS13090	0.17	+0.4
2,819,363	+		ABIE51_RS13090	0.20	-0.1
2,819,363	+		ABIE51_RS13090	0.20	+3.0
2,819,363	+		ABIE51_RS13090	0.20	+0.7
2,819,364	-		ABIE51_RS13090	0.21	+1.1
2,819,364	-		ABIE51_RS13090	0.21	+0.6
2,819,550	-				+0.5
2,819,550	-				+0.3
2,819,550	-				+0.4
2,819,570	+				+0.5
2,819,570	+				+0.1
2,819,571	-				-0.3
2,819,571	-				-0.0
2,819,583	+				+0.5
2,819,583	+				-1.6
2,819,584	-				-1.9
2,819,584	-				-0.3
2,819,584	-				+0.6
2,819,874	-				+0.1
2,819,874	-				+0.3
2,819,943	-				-0.2
2,820,992	-				-0.3
2,820,992	-				-0.1
2,821,171	+				+0.4
2,821,235	+		ABIE51_RS13100	0.13	-0.1
2,821,251	+		ABIE51_RS13100	0.14	-0.6
2,821,251	+		ABIE51_RS13100	0.14	+0.1
2,821,252	-		ABIE51_RS13100	0.14	-0.4
2,821,299	+		ABIE51_RS13100	0.16	+0.1
2,821,300	-		ABIE51_RS13100	0.16	+0.9
2,821,313	-		ABIE51_RS13100	0.17	-0.1
2,821,322	+		ABIE51_RS13100	0.18	+0.7
2,821,322	+		ABIE51_RS13100	0.18	+0.0
2,821,322	+		ABIE51_RS13100	0.18	+0.4
2,821,322	+		ABIE51_RS13100	0.18	+0.1
2,821,323	-		ABIE51_RS13100	0.18	-0.4
2,821,323	-		ABIE51_RS13100	0.18	+0.6
2,821,386	-		ABIE51_RS13100	0.21	-0.8
2,821,386	-		ABIE51_RS13100	0.21	-0.5
2,821,400	-		ABIE51_RS13100	0.22	+0.4
2,821,400	-		ABIE51_RS13100	0.22	+0.2
2,821,463	+		ABIE51_RS13100	0.25	-0.0
2,821,464	-		ABIE51_RS13100	0.25	+0.3
2,821,470	-		ABIE51_RS13100	0.26	-0.1
2,821,539	+		ABIE51_RS13100	0.30	-0.1
2,821,546	+		ABIE51_RS13100	0.30	+0.6
2,821,547	-		ABIE51_RS13100	0.30	-0.4
2,821,547	-		ABIE51_RS13100	0.30	-0.7
2,821,566	+		ABIE51_RS13100	0.31	-0.9
2,821,566	+		ABIE51_RS13100	0.31	+1.0
2,821,566	+		ABIE51_RS13100	0.31	-0.4
2,821,566	+		ABIE51_RS13100	0.31	+0.7
2,821,567	-		ABIE51_RS13100	0.31	-0.5
2,821,567	-		ABIE51_RS13100	0.31	+0.0
2,821,567	-		ABIE51_RS13100	0.31	-0.5
2,821,567	-		ABIE51_RS13100	0.31	+0.0
2,821,567	-		ABIE51_RS13100	0.31	-0.2
2,821,661	+		ABIE51_RS13100	0.37	+1.2
2,821,662	-		ABIE51_RS13100	0.37	+0.7
2,821,687	+		ABIE51_RS13100	0.38	-0.3
2,821,687	+		ABIE51_RS13100	0.38	+0.8
2,821,688	-		ABIE51_RS13100	0.38	+0.1
2,821,699	+		ABIE51_RS13100	0.39	-0.6
2,821,699	+		ABIE51_RS13100	0.39	-0.1
2,821,699	+		ABIE51_RS13100	0.39	+0.2
2,821,699	+		ABIE51_RS13100	0.39	+0.2
2,821,703	+		ABIE51_RS13100	0.39	+0.5
2,821,791	-		ABIE51_RS13100	0.44	+0.4
2,821,895	+		ABIE51_RS13100	0.50	+0.4
2,821,940	+		ABIE51_RS13100	0.52	+0.5
2,821,940	+		ABIE51_RS13100	0.52	-1.1
2,821,941	-		ABIE51_RS13100	0.52	+0.2