Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09085

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,942,598	+		ABIE51_RS09080	0.58	-0.5
1,942,688	+		ABIE51_RS09080	0.62	+0.2
1,942,688	+		ABIE51_RS09080	0.62	+0.4
1,942,689	-		ABIE51_RS09080	0.62	+0.0
1,942,689	-		ABIE51_RS09080	0.62	+0.2
1,942,689	-		ABIE51_RS09080	0.62	+2.3
1,942,763	+		ABIE51_RS09080	0.66	+0.0
1,942,763	+		ABIE51_RS09080	0.66	+0.4
1,942,763	+		ABIE51_RS09080	0.66	-0.6
1,942,763	+		ABIE51_RS09080	0.66	-0.4
1,942,764	-		ABIE51_RS09080	0.66	+1.0
1,942,764	-		ABIE51_RS09080	0.66	-0.0
1,942,764	-		ABIE51_RS09080	0.66	+0.1
1,942,811	+		ABIE51_RS09080	0.68	-0.4
1,942,811	+		ABIE51_RS09080	0.68	-0.2
1,942,812	-		ABIE51_RS09080	0.68	+0.3
1,942,812	-		ABIE51_RS09080	0.68	-0.1
1,942,812	-		ABIE51_RS09080	0.68	-0.8
1,942,812	-		ABIE51_RS09080	0.68	-0.0
1,942,818	-		ABIE51_RS09080	0.69	-0.4
1,942,818	-		ABIE51_RS09080	0.69	+0.6
1,942,818	-		ABIE51_RS09080	0.69	-0.0
1,942,818	-		ABIE51_RS09080	0.69	+0.1
1,942,866	-		ABIE51_RS09080	0.71	+1.1
1,942,866	-		ABIE51_RS09080	0.71	+0.1
1,942,939	+		ABIE51_RS09080	0.74	-0.4
1,942,939	+		ABIE51_RS09080	0.74	+0.6
1,943,295	+				+0.2
1,943,296	-				-0.8
1,943,296	-				-0.5
1,943,363	+				-0.1
1,943,364	-				-0.0
1,943,564	+				+0.4
1,943,564	+				+0.6
1,943,565	-				-0.1
1,943,627	+				+0.6
1,943,627	+				-2.2
1,943,628	-				-1.2
1,943,669	+				-0.4
1,943,669	+				+1.1
1,943,670	-				+0.2
1,943,693	+				-0.8
1,943,694	-				-1.1
1,943,694	-				+0.5
1,943,721	-				+0.6
1,943,721	-				-1.0
1,943,846	+		ABIE51_RS09085	0.11	+0.3
1,943,847	-		ABIE51_RS09085	0.11	-0.1
1,943,847	-		ABIE51_RS09085	0.11	+1.0
1,943,847	-		ABIE51_RS09085	0.11	-0.3
1,943,895	-		ABIE51_RS09085	0.13	-1.3
1,943,988	-		ABIE51_RS09085	0.16	-0.6
1,944,296	+		ABIE51_RS09085	0.28	-0.6
1,944,297	-		ABIE51_RS09085	0.28	-0.7
1,944,297	-		ABIE51_RS09085	0.28	-0.6
1,944,297	-		ABIE51_RS09085	0.28	-0.4
1,944,395	+		ABIE51_RS09085	0.31	-1.0
1,944,396	-		ABIE51_RS09085	0.31	+0.2
1,944,467	+		ABIE51_RS09085	0.34	-1.1
1,944,467	+		ABIE51_RS09085	0.34	-0.0
1,944,467	+		ABIE51_RS09085	0.34	-0.0
1,944,467	+		ABIE51_RS09085	0.34	-1.4
1,944,664	+		ABIE51_RS09085	0.41	-0.6
1,944,665	-		ABIE51_RS09085	0.41	+1.0
1,944,665	-		ABIE51_RS09085	0.41	-0.7
1,944,681	-		ABIE51_RS09085	0.42	-0.2
1,945,049	+		ABIE51_RS09085	0.56	-1.2
1,945,049	+		ABIE51_RS09085	0.56	-1.2
1,945,220	+		ABIE51_RS09085	0.62	-2.4
1,945,220	+		ABIE51_RS09085	0.62	-1.4
1,945,221	-		ABIE51_RS09085	0.62	-1.1
1,945,323	-		ABIE51_RS09085	0.66	-0.8
1,945,323	-		ABIE51_RS09085	0.66	-0.5
1,945,421	+		ABIE51_RS09085	0.70	-1.2
1,945,421	+		ABIE51_RS09085	0.70	-1.3
1,945,482	-		ABIE51_RS09085	0.72	+0.2
1,945,623	-		ABIE51_RS09085	0.77	-0.6
1,945,721	+		ABIE51_RS09085	0.81	-0.5
1,945,722	-		ABIE51_RS09085	0.81	-1.2
1,946,163	+				-0.4
1,946,164	-				+0.1
1,946,242	+				+0.2
1,946,243	-				+1.0
1,946,243	-				-0.4
1,946,243	-				+0.3
1,946,517	+		ABIE51_RS09090	0.20	-1.3
1,946,518	-		ABIE51_RS09090	0.20	-1.6
1,946,622	+		ABIE51_RS09090	0.30	-0.4
1,947,039	+		ABIE51_RS09090	0.68	+0.5
1,947,073	+		ABIE51_RS09090	0.71	-0.4
1,947,073	+		ABIE51_RS09090	0.71	-1.3
1,947,073	+		ABIE51_RS09090	0.71	-1.0
1,947,074	-		ABIE51_RS09090	0.71	+0.6
1,947,074	-		ABIE51_RS09090	0.71	-1.6
1,947,074	-		ABIE51_RS09090	0.71	-1.0
1,947,108	+		ABIE51_RS09090	0.74	-1.1
1,947,226	-		ABIE51_RS09090	0.85	-0.8
1,947,226	-		ABIE51_RS09090	0.85	-0.6