Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS07695

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,626,086	+		ABIE51_RS07685	0.53	+0.5
1,626,086	+		ABIE51_RS07685	0.53	+0.5
1,626,087	-		ABIE51_RS07685	0.53	-0.4
1,626,742	+				+0.5
1,626,742	+				+0.7
1,626,742	+				-0.9
1,626,743	-				+0.1
1,626,743	-				+0.7
1,626,743	-				+0.6
1,626,743	-				-0.1
1,626,743	-				-2.4
1,626,743	-				-0.2
1,626,805	+		ABIE51_RS07690	0.23	-0.2
1,626,806	-		ABIE51_RS07690	0.24	-0.1
1,626,806	-		ABIE51_RS07690	0.24	+0.4
1,626,806	-		ABIE51_RS07690	0.24	+0.5
1,626,997	+				+0.0
1,626,997	+				-0.2
1,626,997	+				-0.5
1,626,997	+				+0.4
1,626,997	+				-0.3
1,626,997	+				-0.5
1,626,998	-				-0.1
1,626,998	-				-0.4
1,626,998	-				+0.1
1,626,998	-				-0.4
1,626,998	-				-0.0
1,626,998	-				+0.7
1,627,044	-				-0.3
1,627,044	-				+0.6
1,627,044	-				+0.0
1,627,049	-				-0.0
1,627,224	+		ABIE51_RS07695	0.34	-0.2
1,627,225	-		ABIE51_RS07695	0.34	+0.0
1,627,318	-		ABIE51_RS07695	0.55	-1.5
1,627,318	-		ABIE51_RS07695	0.55	+0.5
1,627,530	+				-0.3
1,627,531	-				-0.4
1,627,531	-				+0.7
1,627,628	+				+0.3
1,627,661	-		ABIE51_RS07700	0.11	-0.5
1,627,815	-		ABIE51_RS07700	0.29	+0.3
1,627,914	-		ABIE51_RS07700	0.40	-0.4
1,628,115	-		ABIE51_RS07700	0.64	-0.3
1,628,115	-		ABIE51_RS07700	0.64	+0.1
1,628,312	+		ABIE51_RS07700	0.87	+0.8
1,628,312	+		ABIE51_RS07700	0.87	+0.3
1,628,312	+		ABIE51_RS07700	0.87	-0.2
1,628,312	+		ABIE51_RS07700	0.87	-0.1
1,628,312	+		ABIE51_RS07700	0.87	+0.2
1,628,312	+		ABIE51_RS07700	0.87	-0.2
1,628,313	-		ABIE51_RS07700	0.87	+0.1
1,628,313	-		ABIE51_RS07700	0.87	-0.2
1,628,313	-		ABIE51_RS07700	0.87	-0.3
1,628,343	-				-1.3
1,628,403	+				-0.6
1,628,411	+				+0.1
1,628,411	+				+0.6
1,628,411	+				-0.5
1,628,412	-				+0.0
1,628,412	-				+0.7
1,628,412	-				-0.5
1,628,412	-				+0.3
1,628,412	-				+0.3
1,628,450	+				-0.2
1,628,451	-				-0.4