Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS06595

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,402,660	-		ABIE51_RS06585	0.72	+0.1
1,402,761	-		ABIE51_RS06585	0.81	+0.1
1,402,761	-		ABIE51_RS06585	0.81	-0.6
1,402,785	+		ABIE51_RS06585	0.83	-0.0
1,402,786	-		ABIE51_RS06585	0.84	-0.4
1,402,930	+				+0.3
1,402,930	+				+0.0
1,403,141	+		ABIE51_RS06590	0.25	-0.3
1,403,141	+		ABIE51_RS06590	0.25	+0.1
1,403,141	+		ABIE51_RS06590	0.25	+0.8
1,403,141	+		ABIE51_RS06590	0.25	+0.3
1,403,142	-		ABIE51_RS06590	0.25	-0.2
1,403,142	-		ABIE51_RS06590	0.25	+0.3
1,403,142	-		ABIE51_RS06590	0.25	-2.1
1,403,142	-		ABIE51_RS06590	0.25	+0.1
1,403,202	-		ABIE51_RS06590	0.40	+0.9
1,403,202	-		ABIE51_RS06590	0.40	-0.1
1,403,289	-		ABIE51_RS06590	0.61	+2.4
1,403,289	-		ABIE51_RS06590	0.61	-2.2
1,403,289	-		ABIE51_RS06590	0.61	+0.3
1,403,289	-		ABIE51_RS06590	0.61	-0.1
1,403,478	+				+0.6
1,403,479	-				-0.1
1,403,483	+				-0.9
1,403,483	+				+1.1
1,403,515	+				+1.0
1,403,515	+				-0.4
1,403,515	+				-1.1
1,403,515	+				+0.3
1,403,515	+				-0.6
1,403,515	+				-0.2
1,403,516	-				+1.1
1,403,516	-				-0.1
1,403,516	-				-0.9
1,403,516	-				-0.3
1,403,516	-				-0.4
1,403,516	-				+0.3
1,403,516	-				-0.5
1,403,516	-				-0.0
1,403,516	-				+0.0
1,403,572	-		ABIE51_RS06595	0.25	-1.0
1,403,959	-				+0.0
1,403,959	-				+0.5
1,403,959	-				+0.2
1,403,993	+				-0.6
1,403,994	-				-0.6
1,403,994	-				-0.7
1,404,000	+				-0.9
1,404,000	+				-0.9
1,404,000	+				+0.4
1,404,000	+				+0.3
1,404,001	-				+0.1
1,404,001	-				-0.7
1,404,158	-		ABIE51_RS06600	0.21	+0.2
1,404,193	+		ABIE51_RS06600	0.26	+0.1
1,404,193	+		ABIE51_RS06600	0.26	+1.1
1,404,194	-		ABIE51_RS06600	0.26	-0.2
1,404,292	+		ABIE51_RS06600	0.41	-0.4
1,404,293	-		ABIE51_RS06600	0.41	-0.2
1,404,301	+		ABIE51_RS06600	0.43	+1.2
1,404,301	+		ABIE51_RS06600	0.43	+1.2
1,404,302	-		ABIE51_RS06600	0.43	-0.6
1,404,302	-		ABIE51_RS06600	0.43	-0.1
1,404,302	-		ABIE51_RS06600	0.43	+0.2
1,404,302	-		ABIE51_RS06600	0.43	+0.4
1,404,304	+		ABIE51_RS06600	0.43	-1.3
1,404,304	+		ABIE51_RS06600	0.43	+1.1
1,404,304	+		ABIE51_RS06600	0.43	-0.3
1,404,304	+		ABIE51_RS06600	0.43	+0.7
1,404,304	+		ABIE51_RS06600	0.43	-0.3
1,404,304	+		ABIE51_RS06600	0.43	+0.6
1,404,304	+		ABIE51_RS06600	0.43	-0.3
1,404,305	-		ABIE51_RS06600	0.43	-0.0
1,404,305	-		ABIE51_RS06600	0.43	-1.0
1,404,305	-		ABIE51_RS06600	0.43	-0.4
1,404,305	-		ABIE51_RS06600	0.43	+0.1
1,404,305	-		ABIE51_RS06600	0.43	+0.4
1,404,305	-		ABIE51_RS06600	0.43	+0.5
1,404,305	-		ABIE51_RS06600	0.43	+0.5
1,404,305	-		ABIE51_RS06600	0.43	-1.8
1,404,305	-		ABIE51_RS06600	0.43	+0.2
1,404,305	-		ABIE51_RS06600	0.43	+0.2
1,404,431	-		ABIE51_RS06600	0.63	+0.1
1,404,613	+				+0.4
1,404,673	+				+0.4
1,404,674	-				-0.3
1,404,709	+				+0.2
1,404,710	-				+0.1
1,404,710	-				+0.9
1,404,710	-				+0.1