Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS05175

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,116,430	+		ABIE51_RS05170	0.72	+0.1
1,116,430	+		ABIE51_RS05170	0.72	-0.1
1,116,430	+		ABIE51_RS05170	0.72	+0.3
1,116,430	+		ABIE51_RS05170	0.72	-1.3
1,116,430	+		ABIE51_RS05170	0.72	-0.4
1,116,431	-		ABIE51_RS05170	0.72	-0.2
1,116,431	-		ABIE51_RS05170	0.72	+0.1
1,116,431	-		ABIE51_RS05170	0.72	-0.1
1,116,431	-		ABIE51_RS05170	0.72	+0.8
1,116,431	-		ABIE51_RS05170	0.72	+0.3
1,116,431	-		ABIE51_RS05170	0.72	+0.1
1,116,431	-		ABIE51_RS05170	0.72	-0.0
1,116,800	-		ABIE51_RS05170	0.89	-0.5
1,116,954	-				+0.2
1,116,954	-				+0.7
1,116,954	-				-0.4
1,117,040	+				-0.5
1,117,040	+				+0.4
1,117,099	-				+0.2
1,117,099	-				+0.3
1,117,099	-				-0.4
1,117,099	-				-0.3
1,117,099	-				+0.1
1,117,474	+		ABIE51_RS05175	0.19	-0.7
1,117,474	+		ABIE51_RS05175	0.19	-1.3
1,117,475	-		ABIE51_RS05175	0.19	-0.4
1,117,475	-		ABIE51_RS05175	0.19	-1.0
1,117,475	-		ABIE51_RS05175	0.19	+0.0
1,117,475	-		ABIE51_RS05175	0.19	-1.2
1,117,475	-		ABIE51_RS05175	0.19	-1.0
1,117,585	+		ABIE51_RS05175	0.26	-1.7
1,117,585	+		ABIE51_RS05175	0.26	-0.4
1,117,586	-		ABIE51_RS05175	0.26	-0.3
1,117,777	+		ABIE51_RS05175	0.38	-0.6
1,117,777	+		ABIE51_RS05175	0.38	-1.1
1,117,778	-		ABIE51_RS05175	0.38	+3.0
1,117,778	-		ABIE51_RS05175	0.38	-0.2
1,118,050	+		ABIE51_RS05175	0.55	-0.8
1,118,122	+		ABIE51_RS05175	0.60	+0.6
1,118,123	-		ABIE51_RS05175	0.60	-0.2
1,118,123	-		ABIE51_RS05175	0.60	-1.9
1,118,123	-		ABIE51_RS05175	0.60	-0.3
1,118,123	-		ABIE51_RS05175	0.60	+0.7
1,118,302	-		ABIE51_RS05175	0.72	-0.1
1,118,754	-				+0.3
1,118,868	+				-0.1
1,118,869	-				-0.3
1,118,869	-				-1.5
1,118,871	-				-1.2
1,119,068	+		ABIE51_RS05180	0.15	-3.1
1,119,154	+		ABIE51_RS05180	0.19	-1.2
1,119,154	+		ABIE51_RS05180	0.19	-2.3
1,119,155	-		ABIE51_RS05180	0.19	-1.4
1,119,504	-		ABIE51_RS05180	0.36	+0.5
1,119,584	+		ABIE51_RS05180	0.40	-0.5
1,119,734	+		ABIE51_RS05180	0.47	-0.2